EY674921

Overview
NameEY674921
Unique NameEY674921
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length470
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_CAMJR (Leucyl/phenylalanyl-tRNA--protein transferase OS=Campylobacter jejuni (strain RM1221) GN=aat PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 5.828e-14
Identity = 41/105 (39.05%), Postives = 57/105 (54.29%), Query Frame = 2 
Query:   74 RDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFL 388
            RD +  +WI       Y      GY HS+E + + EL GG+YG+ LG++FFGESM +   NASK+A+  L   +       IDCQ   +HL  +GA  + R  FL
Sbjct:   91 RDTRSQSWINDEFITTYYKLFTQGYAHSLELYENNELIGGIYGLILGKVFFGESMVSIKKNASKVAMIKLCDLLKPYDF-IIDCQVYNQHLEFMGAHNISRKEFL 194
[Close]
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_CAMJD (Leucyl/phenylalanyl-tRNA--protein transferase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=aat PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 5.828e-14
Identity = 41/105 (39.05%), Postives = 56/105 (53.33%), Query Frame = 2 
Query:   74 RDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFL 388
            RD +  +WI       Y      GY HS+E + + EL GG+YG+ LG++FFGESM     NASK+A+  L   +       IDCQ   +HL  +GA  + R  FL
Sbjct:   91 RDARSQSWIDDEFITTYYKLFTQGYAHSLELYENNELIGGIYGLILGKVFFGESMVNIKKNASKVAMIKLCDLLKPYDF-IIDCQVYNQHLEFMGAHNISRKEFL 194
[Close]
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_CAMJJ (Leucyl/phenylalanyl-tRNA--protein transferase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=aat PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 7.611e-14
Identity = 41/105 (39.05%), Postives = 57/105 (54.29%), Query Frame = 2 
Query:   74 RDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFL 388
            RD +  +WI       Y      GY HS+E + + EL GG+YG+ LG++FFGESM +   NASK+A+  L   +       IDCQ   +HL  +GA  + R  FL
Sbjct:   91 RDTRSQSWIDDEFITTYYKLFTQGYAHSLELYENNELIGGIYGLILGKVFFGESMVSIKKNASKVAMIKLCDLLKPYDF-IIDCQVYNQHLEFMGAHNISRKEFL 194
[Close]
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_CAMJE (Leucyl/phenylalanyl-tRNA--protein transferase OS=Campylobacter jejuni GN=aat PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 7.611e-14
Identity = 41/105 (39.05%), Postives = 57/105 (54.29%), Query Frame = 2 
Query:   74 RDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFL 388
            RD +  +WI       Y      GY HS+E + + EL GG+YG+ LG++FFGESM +   NASK+A+  L   +       IDCQ   +HL  +GA  + R  FL
Sbjct:   91 RDTRSQSWIDDEFITTYYKLFTQGYAHSLELYENNELIGGIYGLILGKVFFGESMVSIKKNASKVAMIKLCDLLKPYDF-IIDCQVYNQHLEFMGAHNISRKEFL 194
[Close]
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_CAMJ8 (Leucyl/phenylalanyl-tRNA--protein transferase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=aat PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 7.611e-14
Identity = 41/105 (39.05%), Postives = 57/105 (54.29%), Query Frame = 2 
Query:   74 RDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFL 388
            RD +  +WI       Y      GY HS+E + + EL GG+YG+ LG++FFGESM +   NASK+A+  L   +       IDCQ   +HL  +GA  + R  FL
Sbjct:   91 RDTRSQSWIDDEFITTYYKLFTQGYAHSLELYENNELIGGIYGLILGKVFFGESMVSIKKNASKVAMIKLCDLLKPYDF-IIDCQVYNQHLEFMGAHNISRKEFL 194
The following BLAST results are available for this feature:
BLAST of EY674921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 305
Match NameE-valueIdentityDescription
LFTR_CAMJR5.828e-1439.05Leucyl/phenylalanyl-tRNA--protein transferase OS=C... [more]
LFTR_CAMJD5.828e-1439.05Leucyl/phenylalanyl-tRNA--protein transferase OS=C... [more]
LFTR_CAMJJ7.611e-1439.05Leucyl/phenylalanyl-tRNA--protein transferase OS=C... [more]
LFTR_CAMJE7.611e-1439.05Leucyl/phenylalanyl-tRNA--protein transferase OS=C... [more]
LFTR_CAMJ87.611e-1439.05Leucyl/phenylalanyl-tRNA--protein transferase OS=C... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-B04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674921 ID=EY674921; Name=EY674921; organism=Citrus sinensis; type=EST; length=470bp
CCGGGCGGTTCCGGGTCCGGAATCCCGGGTCGACACGGCCTTCGCCACGG
TGATGGCGCACCCCTCCGCGCCGCGCGATGGCCAGCCGGGCACCTGGATC
ACCCCCGCCATGCGGCAGGCCTACCTCGCCTGGCACGAGGCCGGCTACGT
CCACAGCATCGAAACCTGGATCGACGGCGAACTGGCCGGCGGCCTGTACG
GCATCAACCTGGGCCGCATGTTCTTCGGCGAATCGATGTTCACGCGCGCG
CCCAACGCCTCCAAGATCGCGCTGGCCTACCTGGTGCGCTACGTCAGCGC
GCAGGGCGTGCAGTGGATCGACTGCCAGCAGCAGACCCGCCATCTGGCCA
GCCTGGGCGCGCGGCCGGTGCCACGCTCGCGCTTCCTGCAACACGTGCGC
GCCGCCACCGTGCACCCGCCGCTGGCCTGGTCGCGCGGACGGCTGGACAG
CACGGGGCGGCTGCTGCCCC
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