EY674921

Overview
NameEY674921
Unique NameEY674921
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length470
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_XANC8 (Leucyl/phenylalanyl-tRNA--protein transferase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=aat PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.879e-29
Identity = 68/140 (48.57%), Postives = 89/140 (63.57%), Query Frame = 2
Query:   26 RVDTAFATVMAHPS-APRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHV--RAATVHPPLAWSR 436
            R DTAFA V+A  + +PR GQ GTWIT  M++AYL  H  GY HS+E +    L GG+YG+ +G+MFFGESMF+ A   SKIALA L   +   G   ID Q +  HL  LGA+ + R +FLQHV  + A   PP +W++
Sbjct:   94 RADTAFAQVIAACALSPRPGQDGTWITDQMQEAYLDLHRRGYAHSVEVFDGARLVGGIYGVAIGQMFFGESMFSGASGGSKIALAALAAELHGLGWPLIDAQVENPHLMRLGAQRLQREQFLQHVATQVALPEPPGSWTQ 233          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_PSE14 (Leucyl/phenylalanyl-tRNA--protein transferase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=aat PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.879e-29
Identity = 65/139 (46.76%), Postives = 87/139 (62.59%), Query Frame = 2
Query:   32 DTAFATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPLA-WSRGRL 445
            D  FA+V+   +APR     TWIT +M+ AYL  H  G+ HS+E W   EL GGLYG+ +G++FFGESMF+RA NASK+  A LV++++  G   IDCQ  T+HL S GAR +PR  F  ++      P  A WS  R+
Sbjct:   91 DRDFASVIKACAAPRSYANETWITGSMQDAYLELHRRGHAHSVEVWDQNELVGGLYGLAMGQLFFGESMFSRADNASKVGFATLVQHLTDWGFVLIDCQMPTQHLHSFGARSIPRQTFADYLSRHLDQPSGADWSYRRV 229          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_METCA (Leucyl/phenylalanyl-tRNA--protein transferase OS=Methylococcus capsulatus GN=aat PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.879e-29
Identity = 66/135 (48.89%), Postives = 84/135 (62.22%), Query Frame = 2
Query:   32 DTAFATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRF--LQHVRAATVHPPLAW 430
            D AF  V+   +  R+   GTW+T  M+ AYLA+H AG+ HS E W DG L GGLYG+ +GR+F+GESMF R  +ASK ALA+ V  +S  G + IDCQ  + HL SLGA  +PRS F  L    + T   P AW
Sbjct:   93 DRAFRAVITACAERREKSEGTWLTADMQSAYLAFHHAGFAHSFEAWQDGALVGGLYGVAMGRIFYGESMFHRVTDASKAALAFAVGCLSHWGYRMIDCQVYSSHLVSLGASTIPRSEFQALVSEYSETSVDPEAW 227          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_PSESM (Leucyl/phenylalanyl-tRNA--protein transferase OS=Pseudomonas syringae pv. tomato GN=aat PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 3.760e-29
Identity = 61/122 (50.00%), Postives = 80/122 (65.57%), Query Frame = 2
Query:   32 DTAFATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHV 397
            DT FA V+   +APR     TWIT +M+ AYL  H  G+ HS+E W   EL GGLYG+ +G++FFGESMF+RA NASK+  A LV +++  G   IDCQ  T+HL S GAR +PR  F  ++
Sbjct:   91 DTDFARVIKACAAPRSYANETWITGSMQDAYLELHRRGHAHSVEVWDQDELVGGLYGLAMGQLFFGESMFSRADNASKVGFATLVEHLTDWGFVLIDCQMPTQHLHSFGARSIPRQTFADYL 212          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_XYLFM (Leucyl/phenylalanyl-tRNA--protein transferase OS=Xylella fastidiosa (strain M12) GN=aat PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 6.413e-29
Identity = 69/139 (49.64%), Postives = 84/139 (60.43%), Query Frame = 2
Query:   26 RVDTAFATVM-AHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHP--PLAWS 433
            R DT FA V+ A  S PR GQ GTWIT  MR+AYL  H+ GY HS+E +    L GG+YG+ +GRMFFGESMF+    ASKIALA L  ++    V  ID Q + +HL +LGA   PR  FL +VR        P  WS
Sbjct:   94 RADTMFAAVIDACASTPRRGQDGTWITANMREAYLTLHQHGYAHSVEVFDGTMLVGGIYGVAIGRMFFGESMFSTHNGASKIALASLAYFLHTHSVPLIDAQVENQHLLNLGAERWPRRDFLTYVRRLITQTELPACWS 232          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_PSEU5 (Leucyl/phenylalanyl-tRNA--protein transferase OS=Pseudomonas stutzeri (strain A1501) GN=aat PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 6.413e-29
Identity = 60/120 (50.00%), Postives = 76/120 (63.33%), Query Frame = 2
Query:   32 DTAFATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQ 391
            D AFA V+   + PR    GTWIT  M+ AY+  HE G  HS+E W  G+L GGLYG+ +G +FFGESMF+RA +ASK+    LV  +   G   IDCQ  TRHL S GAR +PR+ F +
Sbjct:   91 DKAFAEVIQGCAGPRSYADGTWITTPMQDAYVRLHEMGVAHSVEVWQQGQLVGGLYGLAMGELFFGESMFSRATDASKVGFVTLVERLREWGFALIDCQMPTRHLESFGARSIPRAAFAE 210          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_PSEPK (Leucyl/phenylalanyl-tRNA--protein transferase OS=Pseudomonas putida (strain KT2440) GN=aat PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 6.413e-29
Identity = 62/122 (50.82%), Postives = 77/122 (63.11%), Query Frame = 2
Query:   32 DTAFATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHV 397
            DT F  V+A  +APRD   GTWIT  MR AY   H  G  HS+E   DGEL GGLYG+ +G++FFGESMF+RA NASK+    LV ++   G   IDCQ  T HL SLGA  + R+ F  ++
Sbjct:   91 DTDFPAVIAACAAPRDYADGTWITDTMRNAYCELHRRGIAHSVEVRQDGELVGGLYGLAMGQLFFGESMFSRADNASKVGFVTLVNHLRDAGFVLIDCQMPTNHLHSLGAHAISRAEFASYL 212          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_PSEP1 (Leucyl/phenylalanyl-tRNA--protein transferase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=aat PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 6.413e-29
Identity = 62/122 (50.82%), Postives = 77/122 (63.11%), Query Frame = 2
Query:   32 DTAFATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHV 397
            DT F  V+A  +APRD   GTWIT  MR AY   H  G  HS+E   DGEL GGLYG+ +G++FFGESMF+RA NASK+    LV ++   G   IDCQ  T HL SLGA  + R+ F  ++
Sbjct:   91 DTDFPAVIAACAAPRDYADGTWITDTMRNAYCELHRRGIAHSVEVRQDGELVGGLYGLAMGQLFFGESMFSRADNASKVGFVTLVNHLRDAGFVLIDCQMPTNHLHSLGAHAISRAEFASYL 212          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_PSEAB (Leucyl/phenylalanyl-tRNA--protein transferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=aat PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 6.413e-29
Identity = 62/127 (48.82%), Postives = 79/127 (62.20%), Query Frame = 2
Query:   41 FATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPP 421
            F  V+   +APRD   GTWIT  M+ AY   H  G  HS+E W + +L GGLYG+ +GR+FFGESMF+RA NASK+    LVR++   G   IDCQ  TRHL SLGAR + R  F  +++     PP
Sbjct:   94 FRAVIQACAAPRDYADGTWITTPMQLAYQELHLRGIAHSVEVWQERQLVGGLYGLAMGRLFFGESMFSRADNASKVGFVTLVRHLRDAGFVLIDCQMPTRHLHSLGARAISRGEFADYLQRYRDQPP 220          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_PSEA8 (Leucyl/phenylalanyl-tRNA--protein transferase OS=Pseudomonas aeruginosa (strain LESB58) GN=aat PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 6.413e-29
Identity = 62/127 (48.82%), Postives = 79/127 (62.20%), Query Frame = 2
Query:   41 FATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPP 421
            F  V+   +APRD   GTWIT  M+ AY   H  G  HS+E W + +L GGLYG+ +GR+FFGESMF+RA NASK+    LVR++   G   IDCQ  TRHL SLGAR + R  F  +++     PP
Sbjct:   94 FRAVIQACAAPRDYADGTWITTPMQLAYQELHLRGIAHSVEVWQERQLVGGLYGLAMGRLFFGESMFSRADNASKVGFVTLVRHLRDAGFVLIDCQMPTRHLHSLGARAISRGEFADYLQRYRDQPP 220          
The following BLAST results are available for this feature:
BLAST of EY674921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 305
Match NameE-valueIdentityDescription
LFTR_XANC82.879e-2948.57Leucyl/phenylalanyl-tRNA--protein transferase OS=X... [more]
LFTR_PSE142.879e-2946.76Leucyl/phenylalanyl-tRNA--protein transferase OS=P... [more]
LFTR_METCA2.879e-2948.89Leucyl/phenylalanyl-tRNA--protein transferase OS=M... [more]
LFTR_PSESM3.760e-2950.00Leucyl/phenylalanyl-tRNA--protein transferase OS=P... [more]
LFTR_XYLFM6.413e-2949.64Leucyl/phenylalanyl-tRNA--protein transferase OS=X... [more]
LFTR_PSEU56.413e-2950.00Leucyl/phenylalanyl-tRNA--protein transferase OS=P... [more]
LFTR_PSEPK6.413e-2950.82Leucyl/phenylalanyl-tRNA--protein transferase OS=P... [more]
LFTR_PSEP16.413e-2950.82Leucyl/phenylalanyl-tRNA--protein transferase OS=P... [more]
LFTR_PSEAB6.413e-2948.82Leucyl/phenylalanyl-tRNA--protein transferase OS=P... [more]
LFTR_PSEA86.413e-2948.82Leucyl/phenylalanyl-tRNA--protein transferase OS=P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-B04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674921 ID=EY674921; Name=EY674921; organism=Citrus sinensis; type=EST; length=470bp
CCGGGCGGTTCCGGGTCCGGAATCCCGGGTCGACACGGCCTTCGCCACGG
TGATGGCGCACCCCTCCGCGCCGCGCGATGGCCAGCCGGGCACCTGGATC
ACCCCCGCCATGCGGCAGGCCTACCTCGCCTGGCACGAGGCCGGCTACGT
CCACAGCATCGAAACCTGGATCGACGGCGAACTGGCCGGCGGCCTGTACG
GCATCAACCTGGGCCGCATGTTCTTCGGCGAATCGATGTTCACGCGCGCG
CCCAACGCCTCCAAGATCGCGCTGGCCTACCTGGTGCGCTACGTCAGCGC
GCAGGGCGTGCAGTGGATCGACTGCCAGCAGCAGACCCGCCATCTGGCCA
GCCTGGGCGCGCGGCCGGTGCCACGCTCGCGCTTCCTGCAACACGTGCGC
GCCGCCACCGTGCACCCGCCGCTGGCCTGGTCGCGCGGACGGCTGGACAG
CACGGGGCGGCTGCTGCCCC
back to top