EY674921

Overview
NameEY674921
Unique NameEY674921
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length470
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_ZYMMO (Leucyl/phenylalanyl-tRNA--protein transferase OS=Zymomonas mobilis GN=aat PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 3.183e-28
Identity = 63/146 (43.15%), Postives = 85/146 (58.22%), Query Frame = 2
Query:   32 DTAFATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPLAWSRGRLDSTGRLLP 469
            D  F  V+   + P + +P +WI P +R AY   H  GY HSIE W+D  L GGLYG+NLG  FFGESMF+R  NASK+ALA+LV  +       +DCQ  T HLAS+GA  + R  +L+ +++A          G  ++  RL P
Sbjct:   66 DRDFEAVIDLCAEPTEDRPDSWINPPIRAAYCQLHNLGYAHSIECWLDNRLVGGLYGVNLGYAFFGESMFSRVSNASKVALAWLVARLKVGNFSLLDCQFITDHLASMGAIEITREDYLKRLKSAVSSYFTDKETGNWNTLDRLSP 211          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_XANOR (Leucyl/phenylalanyl-tRNA--protein transferase OS=Xanthomonas oryzae pv. oryzae GN=aat PE=3 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 3.183e-28
Identity = 66/140 (47.14%), Postives = 87/140 (62.14%), Query Frame = 2
Query:   26 RVDTAFATVM-AHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHV--RAATVHPPLAWSR 436
            R DTAF  V+ A  ++PR GQ GTWIT  M+QAY+A H  G+ HSIE +    L GG+YG+ +GRMFFGESMF+     SK+ALA L   +  +G   ID Q +  HL S+GA  +PR+ FL  V  + A    P +WS+
Sbjct:   95 RADTAFEQVIDACAASPRPGQDGTWITAEMQQAYIALHRLGHAHSIEVFDGARLVGGIYGVAVGRMFFGESMFSGESGGSKVALAALAADLHGRGWPLIDAQVENPHLLSMGAERLPRAEFLHDVQRQVALAEQPGSWSQ 234          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_XANOM (Leucyl/phenylalanyl-tRNA--protein transferase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=aat PE=3 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 3.183e-28
Identity = 66/140 (47.14%), Postives = 87/140 (62.14%), Query Frame = 2
Query:   26 RVDTAFATVM-AHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHV--RAATVHPPLAWSR 436
            R DTAF  V+ A  ++PR GQ GTWIT  M+QAY+A H  G+ HSIE +    L GG+YG+ +GRMFFGESMF+     SK+ALA L   +  +G   ID Q +  HL S+GA  +PR+ FL  V  + A    P +WS+
Sbjct:   95 RADTAFEQVIDACAASPRPGQDGTWITAEMQQAYIALHRLGHAHSIEVFDGARLVGGIYGVAVGRMFFGESMFSGESGGSKVALAALAADLHGRGWPLIDAQVENPHLLSMGAERLPRAEFLHDVQRQVALAEQPGSWSQ 234          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_PSEMY (Leucyl/phenylalanyl-tRNA--protein transferase OS=Pseudomonas mendocina (strain ymp) GN=aat PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 3.183e-28
Identity = 60/123 (48.78%), Postives = 80/123 (65.04%), Query Frame = 2
Query:   32 DTAFATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVR 400
            D  FA V+A  +APR    GTWIT  M++AY   H+ G  HS+E W   +L GGLYG+ +G++FFGESMF+RA NASK+  A LV  +   G   IDCQ  T+HL S GAR +PR+ F  +++
Sbjct:   91 DQDFAAVIAACAAPRAYADGTWITRGMQEAYRQLHQRGIAHSVEVWQGEQLVGGLYGLAIGQLFFGESMFSRADNASKVGFATLVGKLQEWGFVLIDCQMPTQHLHSFGARAIPRATFADYLQ 213          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_HALHL (Leucyl/phenylalanyl-tRNA--protein transferase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=aat PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 4.157e-28
Identity = 63/137 (45.99%), Postives = 79/137 (57.66%), Query Frame = 2
Query:   29 VDTAFATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAA--TVHPPLAWS 433
            +DT F  V+A  +APR  Q GTWIT  M  AY   H  G  HS E W+DGEL GG+YG+ L   FFGESMF+R  +ASK+ L +L   +   G    DCQ    HLA LG R +PRS +L+ +  A    H P  W+
Sbjct:   94 LDTEFEAVVAGCAAPRPDQDGTWITREMIAAYTELHLQGCAHSAEVWLDGELVGGVYGVALNGAFFGESMFSRMEDASKVGLTWLTAQLWRWGFALFDCQMSNPHLARLGVREIPRSEYLRRLEPALRAPHRPPPWT 230          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_DESPS (Leucyl/phenylalanyl-tRNA--protein transferase OS=Desulfotalea psychrophila GN=aat PE=3 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 4.157e-28
Identity = 64/137 (46.72%), Postives = 81/137 (59.12%), Query Frame = 2
Query:   29 VDTAFATVMAHPSAPRDGQ-PGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVR--AATVHPPLAW 430
            +D AF+ V+    + R G+   TWI P MR+AY   HE GY HS+E W    L GGLYG+ LG +FFGESMF+   N+SK  L YLV     +GVQ IDCQ  TRHL   GA  +   +F QH++   A + P  AW
Sbjct:   89 IDQAFSQVIGLCGSSRTGRGEETWILPEMREAYGQLHELGYAHSVECWDVDRLVGGLYGVELGGVFFGESMFSTVSNSSKFCLIYLVEQARKRGVQLIDCQMTTRHLLQFGAVEISGEKFYQHLQLLIADIGPQPAW 225          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_MAGSM (Leucyl/phenylalanyl-tRNA--protein transferase OS=Magnetococcus sp. (strain MC-1) GN=aat PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 5.429e-28
Identity = 64/134 (47.76%), Postives = 83/134 (61.94%), Query Frame = 2
Query:   32 DTAFATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGE-----LAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHP 418
            D  F  VM    A R  + GTWITP M QAYL  H+ G+ HS E+W+  E     LAGG+YG+ +G  FFGESMF R PNASK+AL  LV +++ QG   +DCQ  T+H+   GA  +PRS FL+ ++ A   P
Sbjct:   90 DHVFEQVMHQCGAVRAAE-GTWITPEMEQAYLRLHQMGFAHSCESWLMDENHRYQLAGGIYGVAIGGAFFGESMFYRQPNASKVALVALVGHLAQQGYSLMDCQMTTQHMLRFGAVEMPRSVFLEDLQQAIAQP 222          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_DESMR (Leucyl/phenylalanyl-tRNA--protein transferase OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=aat PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 7.091e-28
Identity = 62/127 (48.82%), Postives = 81/127 (63.78%), Query Frame = 2
Query:   29 VDTAFATVMAHPSA-PRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAA 406
            +DT FA V+   +A PRD   GTWI P M + Y   H AG+ HS+E W +GEL GG YG+ +G+ FFGESMF RA +ASK+A   L R++     ++IDCQQ T HL   GA  V R+ FL+ + AA
Sbjct:   88 LDTDFAGVIRGCAAVPRDADNGTWIVPDMIEGYERLHAAGHAHSVEAWQNGELVGGAYGVAIGKAFFGESMFHRATDASKVAFVTLCRFLDRHEFRFIDCQQATGHLLRFGAVQVRRNEFLRRLEAA 214          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_ANASK (Leucyl/phenylalanyl-tRNA--protein transferase OS=Anaeromyxobacter sp. (strain K) GN=aat PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 7.091e-28
Identity = 65/138 (47.10%), Postives = 80/138 (57.97%), Query Frame = 2
Query:   32 DTAFATVMAH-PSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPLAWSRGR 442
            D AF  V+       R GQ GTWIT  M  AY+  H  G  HS E W    LAGGLYG++LG  FFGESMF  AP+ASK+A    V ++ + GV+ +DCQ +T HL   GAR +PR+ FL  +  A   P L   RGR
Sbjct:   89 DEAFERVIRRCAERDRPGQQGTWITGEMVDAYVRLHRLGVAHSFEAWEGDALAGGLYGVSLGAAFFGESMFADAPDASKVAFVRSVEWLRSAGVELVDCQVRTEHLVRFGAREIPRAEFLARLARALEQPTL---RGR 223          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_ANAD2 (Leucyl/phenylalanyl-tRNA--protein transferase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=aat PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 7.091e-28
Identity = 65/138 (47.10%), Postives = 80/138 (57.97%), Query Frame = 2
Query:   32 DTAFATVMAH-PSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPLAWSRGR 442
            D AF  V+       R GQ GTWIT  M  AY+  H  G  HS E W    LAGGLYG++LG  FFGESMF  AP+ASK+A    V ++ + GV+ +DCQ +T HL   GAR +PR+ FL  +  A   P L   RGR
Sbjct:   89 DEAFERVIRRCAERDRPGQQGTWITGEMVDAYVRLHRLGVAHSFEAWEGDALAGGLYGVSLGAAFFGESMFADAPDASKVAFVRSVEWLRSAGVELVDCQVRTEHLVRFGAREIPRAEFLARLARALEQPTL---RGR 223          
The following BLAST results are available for this feature:
BLAST of EY674921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 305
Match NameE-valueIdentityDescription
LFTR_ZYMMO3.183e-2843.15Leucyl/phenylalanyl-tRNA--protein transferase OS=Z... [more]
LFTR_XANOR3.183e-2847.14Leucyl/phenylalanyl-tRNA--protein transferase OS=X... [more]
LFTR_XANOM3.183e-2847.14Leucyl/phenylalanyl-tRNA--protein transferase OS=X... [more]
LFTR_PSEMY3.183e-2848.78Leucyl/phenylalanyl-tRNA--protein transferase OS=P... [more]
LFTR_HALHL4.157e-2845.99Leucyl/phenylalanyl-tRNA--protein transferase OS=H... [more]
LFTR_DESPS4.157e-2846.72Leucyl/phenylalanyl-tRNA--protein transferase OS=D... [more]
LFTR_MAGSM5.429e-2847.76Leucyl/phenylalanyl-tRNA--protein transferase OS=M... [more]
LFTR_DESMR7.091e-2848.82Leucyl/phenylalanyl-tRNA--protein transferase OS=D... [more]
LFTR_ANASK7.091e-2847.10Leucyl/phenylalanyl-tRNA--protein transferase OS=A... [more]
LFTR_ANAD27.091e-2847.10Leucyl/phenylalanyl-tRNA--protein transferase OS=A... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-B04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674921 ID=EY674921; Name=EY674921; organism=Citrus sinensis; type=EST; length=470bp
CCGGGCGGTTCCGGGTCCGGAATCCCGGGTCGACACGGCCTTCGCCACGG
TGATGGCGCACCCCTCCGCGCCGCGCGATGGCCAGCCGGGCACCTGGATC
ACCCCCGCCATGCGGCAGGCCTACCTCGCCTGGCACGAGGCCGGCTACGT
CCACAGCATCGAAACCTGGATCGACGGCGAACTGGCCGGCGGCCTGTACG
GCATCAACCTGGGCCGCATGTTCTTCGGCGAATCGATGTTCACGCGCGCG
CCCAACGCCTCCAAGATCGCGCTGGCCTACCTGGTGCGCTACGTCAGCGC
GCAGGGCGTGCAGTGGATCGACTGCCAGCAGCAGACCCGCCATCTGGCCA
GCCTGGGCGCGCGGCCGGTGCCACGCTCGCGCTTCCTGCAACACGTGCGC
GCCGCCACCGTGCACCCGCCGCTGGCCTGGTCGCGCGGACGGCTGGACAG
CACGGGGCGGCTGCTGCCCC
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