EY674921

Overview
NameEY674921
Unique NameEY674921
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length470
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_CELJU (Leucyl/phenylalanyl-tRNA--protein transferase OS=Cellvibrio japonicus (strain Ueda107) GN=aat PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 9.261e-28
Identity = 65/136 (47.79%), Postives = 81/136 (59.56%), Query Frame = 2
Query:   32 DTAFATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHP---PLAW 430
            D  FA VM   +APR    GTWI+  M  +Y   HE GY HS+E W D  L GGLYG++LG++FFGESMF+RA NASK   AYLVR +     + IDCQ  + HL +LGA  + R  F + +   T  P   PL W
Sbjct:   91 DHCFAQVMRACAAPRAYANGTWISEQMISSYTRLHEQGYAHSVEVWQDENLVGGLYGLSLGKIFFGESMFSRADNASKTGFAYLVRQLQQWDFRLIDCQVASDHLFTLGAVEISRDEFQKMLVHFTEQPRDYPLHW 226          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_ANADF (Leucyl/phenylalanyl-tRNA--protein transferase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=aat PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 9.261e-28
Identity = 66/140 (47.14%), Postives = 82/140 (58.57%), Query Frame = 2
Query:   32 DTAFATVMAHPSA-PRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPLAWSRGRLD 448
            D AF  V+   +   R GQ GTWI P M  AY+  H  G+ HS E W    LAGGLYG++LG  FFGESMF   P+ASK+A    V +++   V+ IDCQ +T HLA  GAR +PR+ FL  +  A   P L   RGR D
Sbjct:   89 DRAFEDVVRRCAGRARPGQDGTWIVPEMIDAYVRLHRLGFAHSFEAWEGEALAGGLYGVSLGGAFFGESMFADRPDASKVAFVRSVEWLARWDVRLIDCQVRTEHLARFGAREIPRAEFLARLGRALDRPTL---RGRWD 225          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_BRASO (Leucyl/phenylalanyl-tRNA--protein transferase OS=Bradyrhizobium sp. (strain ORS278) GN=aat PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.210e-27
Identity = 62/136 (45.59%), Postives = 84/136 (61.76%), Query Frame = 2
Query:   29 VDTAFATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPLAWSR 436
            V+ AF  VM   +AP+ G+  TWI   +R+ Y   H  G+ HS+E W DGEL GGLYG++LGR FFGESMF RA +ASK+AL +LV  + A G + +D Q  T HL + GA  +PR R+   +  A   P   ++R
Sbjct:   71 VNQAFKAVMDGCAAPQPGREDTWINRRIRELYGGLHAMGHCHSVECWQDGELVGGLYGVSLGRAFFGESMFHRARDASKVALVHLVARLIAGGFELLDTQYVTEHLKTFGAVEIPRRRYTVLLEKALTGPAANFAR 206          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_SPHWW (Leucyl/phenylalanyl-tRNA--protein transferase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=aat PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 3.519e-27
Identity = 61/119 (51.26%), Postives = 76/119 (63.87%), Query Frame = 2
Query:   32 DTAFATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFL 388
            D AF  V+A  +A    +P TWI PA+  AY   H  G+ HSIE W +G L GGLYG+ LG  FFGESMF+R  NASK+ALA+LV  + A G + +DCQ  T HL SLGA  V R  ++
Sbjct:   65 DRAFGEVVAECAAVTSQRPDTWINPAIEAAYADLHRRGHAHSIECWREGRLVGGLYGVRLGGAFFGESMFSRESNASKVALAWLVARLRAGGFRLLDCQFITDHLQSLGAIEVSRDDYV 183          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_CLOTH (Leucyl/phenylalanyl-tRNA--protein transferase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=aat PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 4.596e-27
Identity = 61/135 (45.19%), Postives = 84/135 (62.22%), Query Frame = 2
Query:   20 ESRVDTAFATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPL 424
            E   DT F  V+A  +  R+G   TWITP + ++Y   H+ G+ HS+ETW +G L GGLYG++LG+ FFGESMF+   NASK AL  L + +  +G   IDCQ  ++HL SLGA  + R  FL+++ A   H  L
Sbjct:   85 EVTFDTCFRHVIAMCAKLREGN--TWITPEIIESYSKLHDLGFAHSVETWYEGRLVGGLYGVSLGKCFFGESMFSTMDNASKTALITLCQKLEEKGFLLIDCQVYSKHLESLGAVNIDRDLFLKYLEAGLSHETL 217          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_SYNAS (Leucyl/phenylalanyl-tRNA--protein transferase OS=Syntrophus aciditrophicus (strain SB) GN=aat PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 6.003e-27
Identity = 65/142 (45.77%), Postives = 79/142 (55.63%), Query Frame = 2
Query:   44 ATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPLAWSRGRLDSTGRLLP 469
            A + A  +  R  Q GTWIT  M++AY   HE GY HS+E W D  L GGLYG++LG  FFGESMF+R  NASK AL +L   +       IDCQ  T HLA LGAR +PR  F   +R +   P L  +      T   LP
Sbjct:   94 AVIHACATIGRPAQEGTWITEEMQEAYSILHELGYAHSVEVWRDRGLIGGLYGVSLGGCFFGESMFSRESNASKAALIFLSSLLKILRFTLIDCQVYTSHLALLGARFIPRETFTALIRKSLRRPTLRGNWSTHPETADKLP 235          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_PSEA6 (Leucyl/phenylalanyl-tRNA--protein transferase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=aat PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 7.840e-27
Identity = 58/110 (52.73%), Postives = 70/110 (63.64%), Query Frame = 2
Query:   89 GTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHP 418
            GTWIT  M  AY+  H  G  HSIE W D EL GGLYG+  G +F GESMF  A NASK+A+ YLV  +   G ++IDCQ Q  HLASLG   +PR+ FL  ++ A  HP
Sbjct:  111 GTWITDDMINAYIELHRCGGAHSIEVWDDEELVGGLYGVTPGNVFCGESMFHYATNASKLAMFYLVELLRLNGCEFIDCQLQNDHLASLGCIEMPRAEFLNRLKEAVKHP 220          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_ALCBS (Leucyl/phenylalanyl-tRNA--protein transferase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=aat PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 7.840e-27
Identity = 64/141 (45.39%), Postives = 81/141 (57.45%), Query Frame = 2
Query:   32 DTAFATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVR--AATVHPPLAWSRGRLD 448
            D AF TVM   +APR  + GTWI+  M  AY   HE GY HS+E W +G LAG LYGI LG+MFFGESM +   N SK+AL  L  +     +Q +D Q +  HL S+GA  +PRS F  H++    +   P  W   R D
Sbjct:   91 DRAFETVMRTCAAPRQDEAGTWISEDMLAAYCRLHELGYAHSVEIWQNGALAGCLYGIQLGQMFFGESMASPQRNGSKVALVALRNFARKLDIQLLDAQIENPHLMSMGAEMMPRSAFEAHLQRWIPSQPAPSHWPGDRFD 231          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_RHOPT (Leucyl/phenylalanyl-tRNA--protein transferase OS=Rhodopseudomonas palustris (strain TIE-1) GN=aat PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.024e-26
Identity = 59/119 (49.58%), Postives = 79/119 (66.39%), Query Frame = 2
Query:   29 VDTAFATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRF 385
            V+  F  V+   +AP+ G+  TWI   +R+ Y+  H+ G+ HS+E W DG+LAGGLYG++LGR FFGESMF RA +ASK+AL +LV  + A G   +D Q  T HL S GA  VPR R+
Sbjct:   72 VNRDFKAVIDGCAAPQPGRDDTWINRRIRELYIGLHDIGHCHSVEVWQDGDLAGGLYGVSLGRAFFGESMFHRARDASKVALVHLVARLLAGGYTLLDTQFVTDHLKSFGAIEVPRLRY 190          
BLAST of EY674921 vs. ExPASy Swiss-Prot
Match: LFTR_BRASB (Leucyl/phenylalanyl-tRNA--protein transferase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=aat PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.024e-26
Identity = 60/140 (42.86%), Postives = 85/140 (60.71%), Query Frame = 2
Query:   29 VDTAFATVMAHPSAPRDGQPGTWITPAMRQAYLAWHEAGYVHSIETWIDGELAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQQTRHLASLGARPVPRSRFLQHVRAATVHPPLAWSRGRLD 448
            V+ AF  VM   + P+ G+  TWI   +R+ Y   +  G+ HS+E W DG+L GGLYG++LGR FFGESMF RA +ASK+AL +LV  + A G + +D Q  T HL + GA  +PR R+   +  A   P   ++R  +D
Sbjct:   71 VNQAFTAVMDGCAEPQPGREDTWINRRIRELYSGLYALGHCHSVECWQDGDLVGGLYGVSLGRAFFGESMFHRARDASKVALVHLVARLIAGGFELLDTQYVTEHLKTFGAVEIPRRRYTGLLEKALTGPAANFTRLSID 210          
The following BLAST results are available for this feature:
BLAST of EY674921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 305
Match NameE-valueIdentityDescription
LFTR_CELJU9.261e-2847.79Leucyl/phenylalanyl-tRNA--protein transferase OS=C... [more]
LFTR_ANADF9.261e-2847.14Leucyl/phenylalanyl-tRNA--protein transferase OS=A... [more]
LFTR_BRASO1.210e-2745.59Leucyl/phenylalanyl-tRNA--protein transferase OS=B... [more]
LFTR_SPHWW3.519e-2751.26Leucyl/phenylalanyl-tRNA--protein transferase OS=S... [more]
LFTR_CLOTH4.596e-2745.19Leucyl/phenylalanyl-tRNA--protein transferase OS=C... [more]
LFTR_SYNAS6.003e-2745.77Leucyl/phenylalanyl-tRNA--protein transferase OS=S... [more]
LFTR_PSEA67.840e-2752.73Leucyl/phenylalanyl-tRNA--protein transferase OS=P... [more]
LFTR_ALCBS7.840e-2745.39Leucyl/phenylalanyl-tRNA--protein transferase OS=A... [more]
LFTR_RHOPT1.024e-2649.58Leucyl/phenylalanyl-tRNA--protein transferase OS=R... [more]
LFTR_BRASB1.024e-2642.86Leucyl/phenylalanyl-tRNA--protein transferase OS=B... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-B04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674921 ID=EY674921; Name=EY674921; organism=Citrus sinensis; type=EST; length=470bp
CCGGGCGGTTCCGGGTCCGGAATCCCGGGTCGACACGGCCTTCGCCACGG
TGATGGCGCACCCCTCCGCGCCGCGCGATGGCCAGCCGGGCACCTGGATC
ACCCCCGCCATGCGGCAGGCCTACCTCGCCTGGCACGAGGCCGGCTACGT
CCACAGCATCGAAACCTGGATCGACGGCGAACTGGCCGGCGGCCTGTACG
GCATCAACCTGGGCCGCATGTTCTTCGGCGAATCGATGTTCACGCGCGCG
CCCAACGCCTCCAAGATCGCGCTGGCCTACCTGGTGCGCTACGTCAGCGC
GCAGGGCGTGCAGTGGATCGACTGCCAGCAGCAGACCCGCCATCTGGCCA
GCCTGGGCGCGCGGCCGGTGCCACGCTCGCGCTTCCTGCAACACGTGCGC
GCCGCCACCGTGCACCCGCCGCTGGCCTGGTCGCGCGGACGGCTGGACAG
CACGGGGCGGCTGCTGCCCC
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