EY674919

Overview
NameEY674919
Unique NameEY674919
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.898e-42
Identity = 46/78 (58.97%), Postives = 56/78 (71.79%), Query Frame = 3
Query:  108 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFC 341
            W +ARATFY              YG+L+ QGYG  TAALSTALFN G +CG+CY+I CVNDP+WCLPG++ +TATNFC
Sbjct:   48 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVNDPQWCLPGSVKITATNFC 125          

HSP 2 Score: 85.5001 bits (210), Expect = 1.898e-42
Identity = 38/77 (49.35%), Postives = 53/77 (68.83%), Query Frame = 1
Query:  379 WCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGH---FLLSPNC*SPNFGGAGDVHAVSIQG 600
            WCNPPQ+HFDLS P+F  IAQY+AGVVPV Y+R+ C + GG++F   G+    ++ P     N GGAGD+  + ++G
Sbjct:  136 WCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPY----NVGGAGDIKLMQVKG 208          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 4.204e-42
Identity = 46/75 (61.33%), Postives = 55/75 (73.33%), Query Frame = 1
Query:  376 GWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGHFLLSPNC*SPNFGGAGDVHAVSIQG 600
            GWCNPP+ HFD+++P F  IAQ RAGVVPV Y+RV C K+GGIRFTI GH   +      N GGAGDV AVS++G
Sbjct:  115 GWCNPPRPHFDMAEPAFTRIAQARAGVVPVQYRRVACAKQGGIRFTITGHSYFNLVL-VTNVGGAGDVTAVSVKG 188          

HSP 2 Score: 95.9005 bits (237), Expect = 4.204e-42
Identity = 46/84 (54.76%), Postives = 53/84 (63.10%), Query Frame = 3
Query:   90 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFC 341
            A G  GW +  ATFY              YGNLYS GYGT+TAALSTALFNNG SCG+C+E++C      CL GT+ VTATN C
Sbjct:   21 AGGDSGWSSGSATFYGGSDASGTMGGACGYGNLYSAGYGTSTAALSTALFNNGQSCGACFEVRCGGGGS-CLAGTVAVTATNLC 103          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 7.127e-42
Identity = 46/78 (58.97%), Postives = 55/78 (70.51%), Query Frame = 3
Query:  108 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFC 341
            W +ARATFY              YGNL+ QGYG  TAALSTALFN+G +CG+CYEI C  DP+WCLPG++ +TATNFC
Sbjct:   52 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFC 129          

HSP 2 Score: 85.1149 bits (209), Expect = 7.127e-42
Identity = 40/76 (52.63%), Postives = 53/76 (69.74%), Query Frame = 1
Query:  379 WCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTING--HFLLSPNC*SPNFGGAGDVHAVSIQG 600
            WCNPPQ+HFDLS  +F  IA+Y+AGVVPV Y+R+PC K GG++F   G  +FL+       N GGAGD+  V ++G
Sbjct:  140 WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLM---VLIYNVGGAGDIKYVQVKG 212          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 3.487e-41
Identity = 46/78 (58.97%), Postives = 55/78 (70.51%), Query Frame = 3
Query:  108 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFC 341
            W +ARATFY              YGNL+ QGYG  TAALSTALFN+G +CG+CYEI C  DP+WCLPG++ +TATNFC
Sbjct:   58 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFC 135          

HSP 2 Score: 82.8037 bits (203), Expect = 3.487e-41
Identity = 39/75 (52.00%), Postives = 52/75 (69.33%), Query Frame = 1
Query:  379 WCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTING--HFLLSPNC*SPNFGGAGDVHAVSIQ 597
            WCNPPQ+HFDLS  +F  IA+Y+AGVVPV Y+R+PC K GG++F   G  +FL+       N GGAGD+  V ++
Sbjct:  146 WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLM---VLIYNVGGAGDIKYVQVK 217          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 6.228e-37
Identity = 41/75 (54.67%), Postives = 53/75 (70.67%), Query Frame = 1
Query:  376 GWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGHFLLSPNC*SPNFGGAGDVHAVSIQG 600
            GWCNPP++HFD+SQP ++ IA YRAG+VPV Y+RVPC + GGIRF +NGH          N GG+G V  + I+G
Sbjct:  116 GWCNPPRRHFDMSQPAWETIAVYRAGIVPVNYRRVPCQRSGGIRFAVNGHSYFELVL-VTNVGGSGAVAQMWIKG 189          

HSP 2 Score: 86.2705 bits (212), Expect = 6.228e-37
Identity = 44/80 (55.00%), Postives = 48/80 (60.00%), Query Frame = 3
Query:  108 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPGT-IMVTATNFC 341
            W  A ATFY              YG+LY  GYGT TAALSTALFN G SCG+C+ I C     +WC PGT I VTATNFC
Sbjct:   25 WTPAFATFYGGSDASGTMGGACGYGDLYGAGYGTRTAALSTALFNGGASCGACFTIACDTRKTQWCKPGTSITVTATNFC 104          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 3.962e-36
Identity = 43/82 (52.44%), Postives = 52/82 (63.41%), Query Frame = 3
Query:  105 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVN--DPKWCLPG-TIMVTATNFC 341
            GW +  ATFY              YGNLY  GYGTNTAALS+ALFN+G SCG CY+I C +  +P+WCL G T+ +T TN C
Sbjct:   31 GWSSGTATFYGGSDASGTMGGACGYGNLYWSGYGTNTAALSSALFNDGASCGQCYQIACDHQAEPRWCLQGRTVTITGTNLC 112          

HSP 2 Score: 82.4185 bits (202), Expect = 3.962e-36
Identity = 40/89 (44.94%), Postives = 57/89 (64.04%), Query Frame = 1
Query:  376 GWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGHFLLSPNC*SPNFGGAGDVHAVSIQGV*NWAGNPLSKKLG 642
            GWCNPP+ HFD+++P +  I  Y+AG+VPV Y+RVPC K+GG+RFT+ G F         N  G+G + +V ++G  N    PLS+  G
Sbjct:  124 GWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGG-FNYFELVLISNVAGSGSIQSVWVKGP-NTDRMPLSRNWG 210          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 5.164e-36
Identity = 44/87 (50.57%), Postives = 50/87 (57.47%), Query Frame = 3
Query:   90 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPGT-IMVTATNFC 341
            A   GGW++  ATFY              YGNLY+QGYG   AALSTALFN G SCG CY I C     P+WC  GT + +TATN C
Sbjct:   21 AAAAGGWVSGTATFYGGKDASGTMGGACGYGNLYTQGYGVYNAALSTALFNGGASCGQCYLIMCDASKTPEWCKAGTAVTITATNLC 107          

HSP 2 Score: 83.5741 bits (205), Expect = 5.164e-36
Identity = 37/75 (49.33%), Postives = 53/75 (70.67%), Query Frame = 1
Query:  376 GWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGHFLLSPNC*SPNFGGAGDVHAVSIQG 600
            GWCNPP+ HFD+SQP ++ I  YRAG+VPV Y++V C ++GG+RFT++G F         N  G+G V A+S++G
Sbjct:  119 GWCNPPRPHFDMSQPAWETIGIYRAGIVPVLYQQVKCWRQGGVRFTVSG-FNYFELVLITNVAGSGSVQAMSVKG 192          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.088e-34
Identity = 46/89 (51.69%), Postives = 60/89 (67.42%), Query Frame = 1
Query:  376 GWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGHFLLSPNC*SPNFGGAGDVHAVSIQGV*NWAGNPLSKKLG 642
            GWCNPP++HFDLS P F  IAQ +AG+VP++Y+RVPC K GGIR+TI G+   +    S N GGAGDV  +S++G       PL +  G
Sbjct:  133 GWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVS-NVGGAGDVAGLSVKGNKRVKWTPLKRNWG 220          

HSP 2 Score: 73.1738 bits (178), Expect = 2.088e-34
Identity = 38/91 (41.76%), Postives = 46/91 (50.55%), Query Frame = 3
Query:   87 HANGG----GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATNFC 341
            H N G    G W  A ATFY              Y +   +GYG  T A+ST LF  G  CG+CYE+KCV+ P  C  G   ++VTATN C
Sbjct:   31 HRNHGKFTAGPWKQAHATFYGGRDGSGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLC 121          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.866e-32
Identity = 38/77 (49.35%), Postives = 54/77 (70.13%), Query Frame = 1
Query:  376 GWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTI--NGHFLLSPNC*SPNFGGAGDVHAVSIQG 600
            GWCNPP+ HFDL++P F  IA ++AG++PV+Y+RV C K GGIRF    NG++LL       N GG GD+  ++++G
Sbjct:  121 GWCNPPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLL---VYVMNVGGPGDIKTMAVKG 194          

HSP 2 Score: 78.1814 bits (191), Expect = 1.866e-32
Identity = 39/83 (46.99%), Postives = 47/83 (56.63%), Query Frame = 3
Query:   99 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATNFC 341
            G  W  A ATFY              YGN+Y  GYG  T ALSTALFN G +CG C+++KCV+ P  C  G+   +VTATN C
Sbjct:   28 GTPWRTASATFYGDDTGSATMGGACGYGNMYDSGYGVATTALSTALFNEGYACGQCFQLKCVSSPN-CYYGSPATVVTATNIC 109          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.431e-32
Identity = 39/80 (48.75%), Postives = 50/80 (62.50%), Query Frame = 3
Query:  108 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPGT-IMVTATNFC 341
            W +A ATFY              YGN+YS GYGTNT ALS+AL+ +G SCG+CY + C  +  +WC  GT + VTATN+C
Sbjct:   27 WTSATATFYGGSDASGTMGGSCGYGNMYSAGYGTNTTALSSALYGDGASCGACYLVTCDASATRWCKNGTSVTVTATNYC 106          

HSP 2 Score: 78.1814 bits (191), Expect = 2.431e-32
Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 1
Query:  376 GWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGHFLLSPNC*SPNFGGAGDVHAVSIQG 600
            GWCNPP++HFD+SQP ++ IA Y +G+VPV Y R PC + GGIRF I GH          N  G+G V A  ++G
Sbjct:  118 GWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYARTPCRRVGGIRFGIAGHDYYELVL-VTNVAGSGAVAAAWVKG 191          
The following BLAST results are available for this feature:
BLAST of EY674919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
EXP23_ARATH1.898e-4258.97Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=... [more]
EXP11_ORYSJ4.204e-4261.33Expansin-A11 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP22_ARATH7.127e-4258.97Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=... [more]
EXP26_ARATH3.487e-4158.97Putative expansin-A26 OS=Arabidopsis thaliana GN=E... [more]
EXPA8_ORYSJ6.228e-3754.67Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP15_ORYSJ3.962e-3652.44Expansin-A15 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP28_ORYSJ5.164e-3650.57Expansin-A28 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP32_ORYSJ2.088e-3451.69Expansin-A32 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP18_ARATH1.866e-3249.35Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=... [more]
EXPA9_ORYSJ2.431e-3248.75Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXP... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-B02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674919 ID=EY674919; Name=EY674919; organism=Citrus sinensis; type=EST; length=1026bp
CCACGCGTCCGGGCTTCCAATTTCTCCCCCAAATGTATTTTGCTGGGTTT
TTCTCGTTGGGTTTCCTTGCATTGGTGTCCTCCGTTCATGCTAATGGAGG
CGGTGGGTGGATCAATGCTCGTGCCACTTTCTATGGTGGTGGCGATGCTT
CAGGGACTATGGGTGGGGCTTGTGGCTATGGGAATCTGTATAGCCAGGGT
TATGGAACGAACACTGCAGCCTTGAGCACGGCTTTGTTCAACAACGGTTT
GAGCTGTGGGTCTTGCTATGAGATTAAGTGTGTTAATGACCCCAAATGGT
GCTTGCCCGGCACCATTATGGTCACAGCTACCAATTTTTGCCCACCGAAC
AACGCCCTCCCCAACAATGCAGGCGGGTTGGTGCAATCCTCCGCAGCAAC
ATTTTGATCTCTCTCAGCCTGTGTTCCAACACATTGCTCAATACAGAGCT
GGAGTTGTCCCTGTAGCTTACAAGAGGGTACCCTGCGGAAAAAAGGGAGG
CATCAGGTTCACAATCAATGGCCATTTCCTACTTTCACCTAATTGTTGAT
CACCCAACTTTGGTGGTGCTGGTGATGTTCATGCTGTTTCAATCCAAGGG
GTCTAGAACTGGGCTGGCAACCCCTTGTCAAAAAAACTGGGGCCCAAAAC
TGGGCAAACCAACCCTTTATCTTCAATGGGCCAAAACCCTGTCCTTTTTA
AGGGCCCCCCAAGCCGAAGGGCCCCCCCTGGGGATTTCCTTAAATGGTTT
GCCCCCTGCCTAACCTGGGTCCCTTTTGCCCCAAAATTTTACCCCCGGGG
GCCCAATTTCCCCCCTAAAAACCCCCCCCAAACACCCTTAAAAAAATTTG
GGGTTTTTTAACACCCTTTTTTTTTTACCATAAAAAATTTTTCGGTGGAA
ACAAAATATATTAAAAAATTTTTTTTTATAAAAAAAAAATTTTTTTTCAA
CCCCACCACCACGGGGGGGGTAATATATAAATAATATTAAATATTATAAT
AAAAAAAAAAAAAAAAAAAAAAGAAA
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