EY674919

Overview
NameEY674919
Unique NameEY674919
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 2.009e-31
Identity = 39/79 (49.37%), Postives = 49/79 (62.03%), Query Frame = 3
Query:  108 WINARATFYXXXXXXXXXXXXXX-YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFC 341
            W +ARA +Y               YG+L   GYG  TAALSTALFN+G SCG+CYEI C  +P+ CL G+I +TAT+ C
Sbjct:   45 WYDARAAYYGDIHGGGTELEGACGYGDLNKHGYGLATAALSTALFNSGASCGACYEIMCSPNPQGCLSGSIKITATDLC 123          

HSP 2 Score: 77.411 bits (189), Expect = 2.009e-31
Identity = 39/79 (49.37%), Postives = 52/79 (65.82%), Query Frame = 1
Query:  373 AGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGHFLLSPNC*S---PNFGGAGDVHAVSIQG 600
            + WC  P +HFDLS P+F  IAQ +A +VPV Y+RVPC K GG++F + G    +PN  +    N GGAGD+ AVS +G
Sbjct:  127 SAWCYLPNKHFDLSLPMFIKIAQVKAKMVPVRYRRVPCAKTGGVKFEVKG----NPNILTILPYNVGGAGDIIAVSAKG 201          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 2.012e-31
Identity = 45/82 (54.88%), Postives = 46/82 (56.10%), Query Frame = 3
Query:  105 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND--PKWCLPGT-IMVTATNFC 341
            GW+   ATFY              YGNLY QGYG N AALST LFNNG SCG CY I C  D  P  C  GT I VT TNFC
Sbjct:   22 GWLQGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNNGASCGQCYLIICNYDKAPSGCRMGTAITVTGTNFC 103          

HSP 2 Score: 72.7886 bits (177), Expect = 2.012e-31
Identity = 33/77 (42.86%), Postives = 51/77 (66.23%), Query Frame = 1
Query:  376 GWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTING--HFLLSPNC*SPNFGGAGDVHAVSIQG 600
            GWCN  + HFD+SQP +++I  Y AG+VP+ Y++V C + GG+RFTI G  +F L       N  G+G + ++S++G
Sbjct:  113 GWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQVKCWRSGGVRFTITGLNYFEL---VLVTNMAGSGSIASMSVKG 186          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.166e-30
Identity = 41/81 (50.62%), Postives = 44/81 (54.32%), Query Frame = 3
Query:  108 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFC 341
            W+   ATFY              YGNLY QGYG N AALST LFN+G SCG CY I C     P WC  G  I VT TN+C
Sbjct:   23 WLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGKAITVTGTNYC 103          

HSP 2 Score: 75.0998 bits (183), Expect = 2.166e-30
Identity = 32/75 (42.67%), Postives = 50/75 (66.67%), Query Frame = 1
Query:  376 GWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGHFLLSPNC*SPNFGGAGDVHAVSIQG 600
            GWCN  + HFD+SQP +++I  Y AG++P+ Y++V C + GG+RFTING F         N  G+G + ++S++G
Sbjct:  113 GWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTING-FNYFELVLVTNMAGSGSIASMSVKG 186          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.670e-30
Identity = 40/79 (50.63%), Postives = 51/79 (64.56%), Query Frame = 3
Query:  108 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT-IMVTATNFC 341
            W +A+A++Y              +G+L   GYG  T  LSTALF  G +CG CYE+KCV+D K+CLPGT I+VTATNFC
Sbjct:   33 WRSAKASYYAADPEDAIGGACG-FGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVDDLKYCLPGTSIVVTATNFC 110          

HSP 2 Score: 71.633 bits (174), Expect = 3.670e-30
Identity = 46/119 (38.66%), Postives = 60/119 (50.42%), Query Frame = 1
Query:  361 PTMQAGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGH-FLLSPNC*SPNFGGAGDVHAVSIQGV--------*NWA----------GNPLSKKLGPKTGQT 660
            P    G CNPP  HF L    F+ IA ++AGV+P+ Y+RV C + GG+RF + G  F L+      N GGAGDV +V I+G          NW           G PLS +L    G+T
Sbjct:  117 PADAGGVCNPPNHHFLLPIQSFEKIALWKAGVMPIQYRRVNCLRDGGVRFAVAGRSFFLTVLI--SNVGGAGDVRSVKIKGTESGWLSMGRNWGQIWHINSDFRGQPLSFELTSSDGKT 233          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.672e-30
Identity = 40/82 (48.78%), Postives = 48/82 (58.54%), Query Frame = 3
Query:  105 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFC 341
            GWI A AT+Y              Y N Y  G+G +TAALS  LF +G SCG CY+++C    DPKWCL G  + VTATNFC
Sbjct:   26 GWIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRGAAVTVTATNFC 107          

HSP 2 Score: 71.633 bits (174), Expect = 3.672e-30
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 1
Query:  376 GWCNPPQQHFDLSQPVFQHIAQY-RAGVVPVAYKRVPCGKKGGIRFTINGHFLLSPNC*SPNFGGAGDVHAVSIQG 600
            GWCN P+ HFD+S P F  IA+    G+VPV Y+RV C ++GG+RFT+ G    +    S N GG G V +V+++G
Sbjct:  114 GWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRGQGNFNMVMIS-NVGGGGSVRSVAVRG 188          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.476e-28
Identity = 37/79 (46.84%), Postives = 48/79 (60.76%), Query Frame = 3
Query:  108 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT-IMVTATNFC 341
            W  ARAT+Y              YG+L   GYG  T  LS  LF  G  CG+C+E++CV+D +WC+PGT I++TATNFC
Sbjct:   40 WRPARATYYAATNPRDAVGGACGYGDLVKSGYGMATVGLSETLFERGQICGACFELRCVDDLRWCIPGTSIILTATNFC 118          

HSP 2 Score: 65.855 bits (159), Expect = 1.476e-28
Identity = 32/75 (42.67%), Postives = 48/75 (64.00%), Query Frame = 1
Query:  376 GWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGHFLLSPNC*SPNFGGAGDVHAVSIQG 600
            G CNPP +HF L    F+ IA ++AG +PV Y+R+ C K+G +RFT++G  +   +    N  G+GD+ AV I+G
Sbjct:  130 GHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRINCRKEGSMRFTVDGGGIFI-SVLITNVAGSGDIAAVKIKG 203          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.755e-28
Identity = 57/83 (68.67%), Postives = 63/83 (75.90%), Query Frame = 3
Query:   99 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFC 341
            GG WINA ATFY              YGNLYSQGYG NTAALSTALFNNGLSCGSC+E+KC+NDP WCLPG  +I++TATNFC
Sbjct:   29 GGPWINAHATFYGEADASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFC 111          

HSP 2 Score: 99.3673 bits (246), Expect = 3.666e-20
Identity = 52/108 (48.15%), Postives = 69/108 (63.89%), Query Frame = 1
Query:  277 SVLMTPNGACPAPLWSQLPIFAHRTTPSPTMQAGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGHFLLSPNC*SPNFGGAGDVHAVSIQG 600
            S+L+T    CP P ++Q            +   GWCNPP++HFDL+ P+F  IA+Y+AG+VPV+Y+R+PC KKGGIRFTING F         N  GAGDV  VS++G
Sbjct:  102 SILITATNFCP-PNFNQA-----------SDNGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTING-FKYFNLVLVTNVAGAGDVIKVSVKG 196          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 5.813e-26
Identity = 54/83 (65.06%), Postives = 61/83 (73.49%), Query Frame = 3
Query:   99 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFC 341
            GG W NA ATFY              YGNLYSQGYG NTAALSTALFNNG SCG+C+EIKC +DP+WC+PG  +I+VTATNFC
Sbjct:   33 GGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFC 115          

HSP 2 Score: 100.523 bits (249), Expect = 1.645e-20
Identity = 52/108 (48.15%), Postives = 67/108 (62.04%), Query Frame = 1
Query:  277 SVLMTPNGACPAPLWSQLPIFAHRTTPSPTMQAGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGHFLLSPNC*SPNFGGAGDVHAVSIQG 600
            S+L+T    CP       P FA      P+   GWCNPP++HFDL+ P+F  I  YRAG+VPV+Y+RVPC K GGIRFT+NG F         N  GAGD++ VS++G
Sbjct:  106 SILVTATNFCP-------PNFAQ-----PSDDGGWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNG-FRYFNLVLVTNVAGAGDINGVSVKG 200          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 9.915e-26
Identity = 53/83 (63.86%), Postives = 61/83 (73.49%), Query Frame = 3
Query:   99 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFC 341
            GG W NA ATFY              YGNLYSQGYGTNTAALSTALFNNG+SCG+C+E+KC NDP+WC  G  +I++TATNFC
Sbjct:   28 GGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFC 110          

HSP 2 Score: 106.301 bits (264), Expect = 2.999e-22
Identity = 53/108 (49.07%), Postives = 67/108 (62.04%), Query Frame = 1
Query:  277 SVLMTPNGACPAPLWSQLPIFAHRTTPSPTMQAGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGHFLLSPNC*SPNFGGAGDVHAVSIQG 600
            S+L+T    CP  L              P+   GWCNPP++HFDL+ PVF  IAQYRAG+VPV+Y+RVPC K+GGIRFTINGH   +      N  GAGD+   S++G
Sbjct:  101 SILITATNFCPPNL------------AQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVL-ITNVAGAGDIVRASVKG 195          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.691e-25
Identity = 54/83 (65.06%), Postives = 60/83 (72.29%), Query Frame = 3
Query:   99 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFC 341
            GG W  A ATFY              YGNLYSQGYGTNTAALST+LFN+G SCG+C+EIKCVNDPKWC PG  ++ VTATNFC
Sbjct:   31 GGSWQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFC 113          

HSP 2 Score: 99.3673 bits (246), Expect = 3.666e-20
Identity = 50/108 (46.30%), Postives = 63/108 (58.33%), Query Frame = 1
Query:  277 SVLMTPNGACPAPLWSQLPIFAHRTTPSPTMQAGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGHFLLSPNC*SPNFGGAGDVHAVSIQG 600
            SV +T    CP  L              P+   GWCNPP+ HFDL+ PVF  IA+YRAG+VP++Y+RV C K GGIRFTINGH   +      N  GAGD+   S++G
Sbjct:  104 SVFVTATNFCPPNL------------AQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVL-ITNVAGAGDIARTSVKG 198          
The following BLAST results are available for this feature:
BLAST of EY674919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
EXP21_ARATH2.009e-3149.37Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=... [more]
EXP18_ORYSJ2.012e-3154.88Expansin-A18 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP19_ORYSJ2.166e-3050.62Expansin-A19 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP10_ORYSJ3.670e-3050.63Expansin-A10 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP12_ARATH3.672e-3048.78Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=... [more]
EXP13_ARATH1.476e-2846.84Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=... [more]
EXPA9_ARATH4.755e-2868.67Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 ... [more]
EXPA3_ARATH5.813e-2665.06Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 ... [more]
EXPA4_ARATH9.915e-2663.86Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 ... [more]
EXP16_ARATH1.691e-2565.06Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-B02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674919 ID=EY674919; Name=EY674919; organism=Citrus sinensis; type=EST; length=1026bp
CCACGCGTCCGGGCTTCCAATTTCTCCCCCAAATGTATTTTGCTGGGTTT
TTCTCGTTGGGTTTCCTTGCATTGGTGTCCTCCGTTCATGCTAATGGAGG
CGGTGGGTGGATCAATGCTCGTGCCACTTTCTATGGTGGTGGCGATGCTT
CAGGGACTATGGGTGGGGCTTGTGGCTATGGGAATCTGTATAGCCAGGGT
TATGGAACGAACACTGCAGCCTTGAGCACGGCTTTGTTCAACAACGGTTT
GAGCTGTGGGTCTTGCTATGAGATTAAGTGTGTTAATGACCCCAAATGGT
GCTTGCCCGGCACCATTATGGTCACAGCTACCAATTTTTGCCCACCGAAC
AACGCCCTCCCCAACAATGCAGGCGGGTTGGTGCAATCCTCCGCAGCAAC
ATTTTGATCTCTCTCAGCCTGTGTTCCAACACATTGCTCAATACAGAGCT
GGAGTTGTCCCTGTAGCTTACAAGAGGGTACCCTGCGGAAAAAAGGGAGG
CATCAGGTTCACAATCAATGGCCATTTCCTACTTTCACCTAATTGTTGAT
CACCCAACTTTGGTGGTGCTGGTGATGTTCATGCTGTTTCAATCCAAGGG
GTCTAGAACTGGGCTGGCAACCCCTTGTCAAAAAAACTGGGGCCCAAAAC
TGGGCAAACCAACCCTTTATCTTCAATGGGCCAAAACCCTGTCCTTTTTA
AGGGCCCCCCAAGCCGAAGGGCCCCCCCTGGGGATTTCCTTAAATGGTTT
GCCCCCTGCCTAACCTGGGTCCCTTTTGCCCCAAAATTTTACCCCCGGGG
GCCCAATTTCCCCCCTAAAAACCCCCCCCAAACACCCTTAAAAAAATTTG
GGGTTTTTTAACACCCTTTTTTTTTTACCATAAAAAATTTTTCGGTGGAA
ACAAAATATATTAAAAAATTTTTTTTTATAAAAAAAAAATTTTTTTTCAA
CCCCACCACCACGGGGGGGGTAATATATAAATAATATTAAATATTATAAT
AAAAAAAAAAAAAAAAAAAAAAGAAA
back to top