EY674919

Overview
NameEY674919
Unique NameEY674919
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.096e-24
Identity = 74/196 (37.76%), Postives = 93/196 (47.45%), Query Frame = 3
Query:   90 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXXXXVQSSAATF*SLSACVPTHCSIQSWSCPCSLQEGTLRKKG--RHQVHNQWPFPTFT*LLITQLWWCW*CSCCFNPRGLELGWQPLVKKTGAQNWANQPFI 671
            A G GGW +A ATFY              YGNLYSQGYGTNTAALSTALFN+G +CGSCYE++C N    CLPG+I VTATNFC                    F             ++   P S +     KKG  R  V+       F  +L+T +          + +G   GWQP+ +  G QNW +  F+
Sbjct:   18 AAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGH---SYFNLVLVTNVAGAGDVR-SVSIKGSRTGWQPMSRNWG-QNWQSNAFL 208          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.096e-24
Identity = 74/196 (37.76%), Postives = 93/196 (47.45%), Query Frame = 3
Query:   90 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXXXXVQSSAATF*SLSACVPTHCSIQSWSCPCSLQEGTLRKKG--RHQVHNQWPFPTFT*LLITQLWWCW*CSCCFNPRGLELGWQPLVKKTGAQNWANQPFI 671
            A G GGW +A ATFY              YGNLYSQGYGTNTAALSTALFN+G +CGSCYE++C N    CLPG+I VTATNFC                    F             ++   P S +     KKG  R  V+       F  +L+T +          + +G   GWQP+ +  G QNW +  F+
Sbjct:   18 AAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGH---SYFNLVLVTNVAGAGDVR-SVSIKGSRTGWQPMSRNWG-QNWQSNAFL 208          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.432e-24
Identity = 52/83 (62.65%), Postives = 58/83 (69.88%), Query Frame = 3
Query:   99 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFC 341
            GGGW  A ATFY              YGNLYSQGYG NTAALSTALFNNG SCG+C+E+KC +DPKWC  G  +I +TATNFC
Sbjct:   28 GGGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFC 110          

HSP 2 Score: 95.1301 bits (235), Expect = 6.913e-19
Identity = 49/108 (45.37%), Postives = 66/108 (61.11%), Query Frame = 1
Query:  277 SVLMTPNGACPAPLWSQLPIFAHRTTPSPTMQAGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGHFLLSPNC*SPNFGGAGDVHAVSIQG 600
            S+ +T    CP       P FA      P+   GWCNPP+ HFDL+ P+F  IA+YRAG+VPV+++RVPC K+GGIRFTING F         N  GAG++  + ++G
Sbjct:  101 SIFITATNFCP-------PNFAQ-----PSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTING-FRYFNLVLVTNVAGAGNIVRLGVKG 195          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.613e-24
Identity = 31/57 (54.39%), Postives = 39/57 (68.42%), Query Frame = 3
Query:  177 YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFC 341
            YG+L    YG  TA +S ALF  G +CG CYE++CVN   WCL G  T++VTAT+FC
Sbjct:   57 YGDLDIFRYGRYTAGVSGALFGRGSACGGCYEVRCVNHVLWCLRGSPTVVVTATDFC 113          

HSP 2 Score: 65.855 bits (159), Expect = 5.613e-24
Identity = 32/77 (41.56%), Postives = 48/77 (62.34%), Query Frame = 1
Query:  376 GWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTING--HFLLSPNC*SPNFGGAGDVHAVSIQG 600
            GWCN P++HF++S+  F  +A+ +A +VPV ++RV C + GG+RFTI G   FL        N    G+V AV ++G
Sbjct:  125 GWCNFPKEHFEMSEAAFLRVAKAKADIVPVQFRRVSCDRAGGMRFTITGGASFL---QVLITNVAADGEVAAVKVKG 198          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.307e-24
Identity = 34/80 (42.50%), Postives = 52/80 (65.00%), Query Frame = 1
Query:  376 GWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTING--HF---LLSPNC*SPNFGGAGDVHAVSIQG 600
            GWCN P++H +LS   F  IA+ RA ++P+ Y+RV CG++GG+RF+++G  HF   L+S      N G  G+V  V ++G
Sbjct:  121 GWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRRVKCGRRGGLRFSLSGSSHFFQVLIS------NVGLDGEVVGVKVKG 194          

HSP 2 Score: 64.3142 bits (155), Expect = 7.307e-24
Identity = 28/57 (49.12%), Postives = 39/57 (68.42%), Query Frame = 3
Query:  177 YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFC 341
            YG+L    +   +A LS  LFN G SCG+C E++CVN  +WCL G  +++VTAT+FC
Sbjct:   53 YGDLRQSSFAGYSAGLSGKLFNRGSSCGACLEVRCVNHIRWCLQGSPSVVVTATDFC 109          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 9.280e-24
Identity = 76/197 (38.58%), Postives = 95/197 (48.22%), Query Frame = 3
Query:   90 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDP--KWCLPG--TIMVTATNFCXXXXXXXXXXXXXVQSSAATF*SLSACVPTHCSIQSWSC---PCSLQEGTLRKKG--RHQVHNQWPFPTFT*LLITQLWWCW*CSCCFNPRGLELGWQPLVKKTGAQNW 653
            A GGG W +A ATFY              YGNLYSQGYG N AALSTALFN+G SCG+C+EIKCVN P  +WC PG  +I++TATNFC                    F      +P    I  +     P S +    RKKG  R  ++    F  F  +LIT +          + +G   GW P+ +  G QNW
Sbjct:   30 AYGGGEWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNSGQSCGACFEIKCVNQPGWEWCHPGSPSILITATNFCPPNYALPSDNGGWCNPPRPHF---DLAMPMFLHIAEYRAGIVPVSYRRVPCRKKGGVRFTING---FRYFNLVLITNVAGAGDIVRA-SVKGTSTGWMPMSRNWG-QNW 218          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.217e-23
Identity = 58/122 (47.54%), Postives = 74/122 (60.66%), Query Frame = 1
Query:  277 SVLMTPNGACPAPLWSQLPIFAHRTTPSPTMQAGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGHFLLSPNC*SPNFGGAGDVHAVSIQGV*NWAGNPLSKKLG 642
            SV++T    CP                 P+   GWCNPP+ HFD+SQPVFQ IA ++AG+VPV+Y+RV C KKGGIRFTINGH   +      N GGAGDVHAV+++   + A   LS+  G
Sbjct:  135 SVVVTATNFCPP------------NNALPSDDGGWCNPPRAHFDMSQPVFQRIALFKAGIVPVSYRRVACQKKGGIRFTINGHSYFNLVL-VTNVGGAGDVHAVAVKSERSAAWQALSRNWG 243          

HSP 2 Score: 110.538 bits (275), Expect = 1.583e-23
Identity = 52/85 (61.18%), Postives = 60/85 (70.59%), Query Frame = 3
Query:   96 GGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC---VNDPKWCLPGTIMVTATNFC 341
            GGGGW +A ATFY              YGNLYSQGYGTNTAALSTALFNNGLSCG+C+E++C         CLPG+++VTATNFC
Sbjct:   60 GGGGWSSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAGGGGSHSCLPGSVVVTATNFC 144          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 2.700e-23
Identity = 48/80 (60.00%), Postives = 56/80 (70.00%), Query Frame = 3
Query:  102 GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFC 341
            G W +A ATFY              YGNLYS GYGTNTAALST LFN+G +CGSCYE++C ND +WCLPG++ VTATN C
Sbjct:   27 GSWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTVLFNDGAACGSCYELRCDNDGQWCLPGSVTVTATNLC 106          

HSP 2 Score: 101.679 bits (252), Expect = 7.386e-21
Identity = 56/122 (45.90%), Postives = 71/122 (58.20%), Query Frame = 1
Query:  277 SVLMTPNGACPAPLWSQLPIFAHRTTPSPTMQAGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGHFLLSPNC*SPNFGGAGDVHAVSIQGV*NWAGNPLSKKLG 642
            SV +T    CP       P +A      P    GWCNPP+ HFD+++P F  I  YRAG+VPV+Y+RVPC KKGGIRFTINGH   +      N  G GDV +VSI+G  +    P+S+  G
Sbjct:   97 SVTVTATNLCP-------PNYA-----LPNDDGGWCNPPRPHFDMAEPAFLQIGVYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVL-VTNVAGPGDVQSVSIKGS-STGWQPMSRNWG 204          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 4.330e-21
Identity = 51/107 (47.66%), Postives = 68/107 (63.55%), Query Frame = 1
Query:  277 SVLMTPNGACPAPLWSQLPIFAHRTTPSPTMQAGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGHFLLSPNC*SPNFGGAGDVHAVSIQ 597
            S+++T    CPA                P  + GWCNPP  HFDLSQP F  IA++++G+VPV+Y+RV C +KGG+RFTINGH   +    S N GGAGDVHAV+++
Sbjct:  106 SIVVTATDLCPA------------NHALPGDRGGWCNPPLHHFDLSQPAFLRIARFQSGIVPVSYRRVACRRKGGMRFTINGHSYFNLVLVS-NVGGAGDVHAVAVK 199          

HSP 2 Score: 80.4925 bits (197), Expect = 1.754e-14
Identity = 41/92 (44.57%), Postives = 53/92 (57.61%), Query Frame = 3
Query:   90 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC----VNDPKWCLP----GTIMVTATNFC 341
            A   G W +A ATFY              YGN Y QGYGT+TAALS  +F +GLSCG+C+E++C      D + CLP     +I+VTAT+ C
Sbjct:   24 AAAAGRWTDAHATFYGGADASGTMGGACGYGNTYGQGYGTDTAALSAVMFGDGLSCGACFELRCGGGGGGDRRGCLPPAAGKSIVVTATDLC 115          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 3.309e-20
Identity = 33/82 (40.24%), Postives = 51/82 (62.20%), Query Frame = 1
Query:  397 QHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGHFLLSPNC*SPNFGGAGDVHAVSIQGV*NWAGNPLSKKLG 642
            +HFDL+ P F  IA+ + GVVPV+Y++V C ++GGI++TI G+   +      N GGAGDV  ++++G       PL +  G
Sbjct:  162 EHFDLTMPAFLSIAEEKLGVVPVSYRKVACVRQGGIKYTITGNPSYNMVM-VKNVGGAGDVVKLTVKGTKRVKWTPLQRSWG 242          

HSP 2 Score: 55.0694 bits (131), Expect = 3.309e-20
Identity = 34/87 (39.08%), Postives = 44/87 (50.57%), Query Frame = 3
Query:   87 HANGG----GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATN 335
            H N G    G W++  ATFY               G   + GYG  TAA+S ALF+NG  CG+CYE+K  +        T++VTATN
Sbjct:   71 HVNHGRYKCGPWVDGHATFYGGRDASGTTEGGAC-GYKDADGYGAMTAAVSPALFDNGAGCGACYELKGDSGK------TVVVTATN 150          
The following BLAST results are available for this feature:
BLAST of EY674919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
EXPA4_ORYSJ1.096e-2437.76Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA4_ORYSI1.096e-2437.76Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4... [more]
EXPA6_ARATH1.432e-2462.65Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 ... [more]
EXP16_ORYSJ5.613e-2454.39Expansin-A16 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP20_ARATH7.307e-2442.50Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=... [more]
EXPA7_ORYSJ9.280e-2438.58Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA5_ORYSJ1.217e-2347.54Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA2_ORYSJ2.700e-2360.00Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP21_ORYSJ4.330e-2147.66Expansin-A21 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP26_ORYSJ3.309e-2040.24Expansin-A26 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-B02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674919 ID=EY674919; Name=EY674919; organism=Citrus sinensis; type=EST; length=1026bp
CCACGCGTCCGGGCTTCCAATTTCTCCCCCAAATGTATTTTGCTGGGTTT
TTCTCGTTGGGTTTCCTTGCATTGGTGTCCTCCGTTCATGCTAATGGAGG
CGGTGGGTGGATCAATGCTCGTGCCACTTTCTATGGTGGTGGCGATGCTT
CAGGGACTATGGGTGGGGCTTGTGGCTATGGGAATCTGTATAGCCAGGGT
TATGGAACGAACACTGCAGCCTTGAGCACGGCTTTGTTCAACAACGGTTT
GAGCTGTGGGTCTTGCTATGAGATTAAGTGTGTTAATGACCCCAAATGGT
GCTTGCCCGGCACCATTATGGTCACAGCTACCAATTTTTGCCCACCGAAC
AACGCCCTCCCCAACAATGCAGGCGGGTTGGTGCAATCCTCCGCAGCAAC
ATTTTGATCTCTCTCAGCCTGTGTTCCAACACATTGCTCAATACAGAGCT
GGAGTTGTCCCTGTAGCTTACAAGAGGGTACCCTGCGGAAAAAAGGGAGG
CATCAGGTTCACAATCAATGGCCATTTCCTACTTTCACCTAATTGTTGAT
CACCCAACTTTGGTGGTGCTGGTGATGTTCATGCTGTTTCAATCCAAGGG
GTCTAGAACTGGGCTGGCAACCCCTTGTCAAAAAAACTGGGGCCCAAAAC
TGGGCAAACCAACCCTTTATCTTCAATGGGCCAAAACCCTGTCCTTTTTA
AGGGCCCCCCAAGCCGAAGGGCCCCCCCTGGGGATTTCCTTAAATGGTTT
GCCCCCTGCCTAACCTGGGTCCCTTTTGCCCCAAAATTTTACCCCCGGGG
GCCCAATTTCCCCCCTAAAAACCCCCCCCAAACACCCTTAAAAAAATTTG
GGGTTTTTTAACACCCTTTTTTTTTTACCATAAAAAATTTTTCGGTGGAA
ACAAAATATATTAAAAAATTTTTTTTTATAAAAAAAAAATTTTTTTTCAA
CCCCACCACCACGGGGGGGGTAATATATAAATAATATTAAATATTATAAT
AAAAAAAAAAAAAAAAAAAAAAGAAA
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