EY674919

Overview
NameEY674919
Unique NameEY674919
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.393e-19
Identity = 52/110 (47.27%), Postives = 68/110 (61.82%), Query Frame = 1
Query:  277 SVLMTPNGACPAPLWSQLPIFAHRTTPSPTMQAGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGH--FLLSPNC*SPNFGGAGDVHAVSIQG 600
            S+ +T    CP P W+            P+   GWCNPP+QHFD+SQP +++IA Y+AG+VPV YKRVPC + GGIRF I+GH  F L       N GG+G V  +SI+G
Sbjct:   99 SITITATNLCP-PNWAL-----------PSNSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKRVPCQRSGGIRFAISGHDYFELVT---VTNVGGSGVVAQMSIKG 193          

HSP 2 Score: 77.0258 bits (188), Expect = 1.940e-13
Identity = 39/79 (49.37%), Postives = 47/79 (59.49%), Query Frame = 3
Query:  114 NARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPG--TIMVTATNFC 341
            +A ATFY              YGNLY+ GYG   AALS+ALFN+G  CG+CY I C  +  KWC PG  +I +TATN C
Sbjct:   30 SAFATFYGGKDGSGTMGGACGYGNLYNAGYGLYNAALSSALFNDGAMCGACYTITCDTSQTKWCKPGGNSITITATNLC 108          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 2.365e-19
Identity = 45/82 (54.88%), Postives = 54/82 (65.85%), Query Frame = 3
Query:  105 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFC 341
            GW+ A ATFY              YGNLY+QGYGT TAALSTALFN+GL+CG CY++ C    D  WC PG ++ +TATNFC
Sbjct:   33 GWVRAHATFYGGADASGTMGGACGYGNLYAQGYGTRTAALSTALFNDGLACGQCYKLVCDRKTDRTWCKPGVSVTITATNFC 114          

HSP 2 Score: 95.9005 bits (237), Expect = 4.053e-19
Identity = 49/114 (42.98%), Postives = 66/114 (57.89%), Query Frame = 1
Query:  274 LSVLMTPNGACPAPLWSQLPIFAHRTTPSPTMQAGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGH-----FLLSPNC*SPNFGGAGDVHAVSIQG 600
            +SV +T    CP P W             P+   GWCNPP+ HFD++QP ++ I  YR G++PV Y+RVPC KKGG+RFTINGH      LL+      N G AG + A+ ++G
Sbjct:  104 VSVTITATNFCP-PNWDL-----------PSDSGGWCNPPRPHFDMAQPAWEKIGIYRGGIIPVIYQRVPCMKKGGVRFTINGHDYFQLVLLT------NVGAAGSIKAMDVKG 199          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.989e-19
Identity = 46/82 (56.10%), Postives = 53/82 (64.63%), Query Frame = 3
Query:  105 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFC 341
            GW+ A ATFY              YGNLY+ GY TNTAALSTALFN+G SCG CY+I C     P+WCL G +I +TATNFC
Sbjct:   27 GWLQAHATFYGGSDASGTMGGACGYGNLYTDGYKTNTAALSTALFNDGKSCGGCYQILCDATKVPQWCLKGKSITITATNFC 108          

HSP 2 Score: 85.5001 bits (210), Expect = 5.478e-16
Identity = 45/108 (41.67%), Postives = 61/108 (56.48%), Query Frame = 1
Query:  277 SVLMTPNGACPAPLWSQLPIFAHRTTPSPTMQAGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGHFLLSPNC*SPNFGGAGDVHAVSIQG 600
            S+ +T    CP       P FA  +        GWCNPP+ HFD++QP F  IA+Y+AG+VP+ YK+V C + GG+RFTING         S N  G G++  V I+G
Sbjct:   99 SITITATNFCP-------PNFAQASD-----NGGWCNPPRPHFDMAQPAFLTIAKYKAGIVPILYKKVGCRRSGGMRFTINGRNYFELVLIS-NVAGGGEISKVWIKG 193          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 1.174e-18
Identity = 46/81 (56.79%), Postives = 51/81 (62.96%), Query Frame = 3
Query:  108 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFC 341
            W  A ATFY              YGNLYSQGYGT  AALSTALFN+G SCG CY+I C     P+WC PG T+ +TATNFC
Sbjct:   39 WQKAHATFYGGADASGTMGGACGYGNLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFC 119          

HSP 2 Score: 90.8929 bits (224), Expect = 1.304e-17
Identity = 48/136 (35.29%), Postives = 71/136 (52.21%), Query Frame = 1
Query:  274 LSVLMTPNGACPAPLWSQLPIFAHRTTPSPTMQAGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGHFLLSPNC*SPNFGGAGDVHAVSIQGV*NWAGNPLSKKLGPKTGQTNPLSSMG 681
            ++V +T    CP P W+            P+   GWCNPP+ HFD++QP ++ I  Y AG++PV Y+RVPC KKGG+RFTINGH          N   AG + ++ + G       P+++  G +      L+  G
Sbjct:  109 VTVTITATNFCP-PNWNL-----------PSDNGGWCNPPRPHFDMAQPAWEKIGVYSAGIIPVIYQRVPCVKKGGLRFTINGHDYFQLVL-VTNVAAAGSIKSMEVMGSNTADWMPMARNWGAQWHSLAYLTGQG 231          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 1.174e-18
Identity = 45/81 (55.56%), Postives = 52/81 (64.20%), Query Frame = 3
Query:  108 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFC 341
            W+ A ATFY              YG+LYSQGYGT  AALSTALFN+G SCG CY+I C     P+WC PG T+ +TATNFC
Sbjct:   52 WLKAHATFYGGADASGTMGGACGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCRPGVTVTITATNFC 132          

HSP 2 Score: 91.2781 bits (225), Expect = 9.983e-18
Identity = 41/84 (48.81%), Postives = 54/84 (64.29%), Query Frame = 1
Query:  274 LSVLMTPNGACPAPLWSQLPIFAHRTTPSPTMQAGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGH 525
            ++V +T    CP P W             P+   GWCNPP+ HFD++QP ++ I  YRAG++PV Y+RVPC KKGG+RFTINGH
Sbjct:  122 VTVTITATNFCP-PNWDL-----------PSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVIYQRVPCVKKGGVRFTINGH 193          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 4.461e-18
Identity = 45/81 (55.56%), Postives = 51/81 (62.96%), Query Frame = 3
Query:  108 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFC 341
            W  A ATFY              YG+LYSQGYGT  AALSTALFN+G SCG CY+I C     P+WC PG T+ +TATNFC
Sbjct:   34 WQKAHATFYGGADASGTMGGGCGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFC 114          

HSP 2 Score: 90.5077 bits (223), Expect = 1.703e-17
Identity = 54/138 (39.13%), Postives = 71/138 (51.45%), Query Frame = 1
Query:  274 LSVLMTPNGACPAPLWSQLPIFAHRTTPSPTMQAGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGHFLLSPNC*SPNFGGAGDVHAVSIQG---------V*NWAGNPLSKKLGPKTGQT 660
            ++V +T    CP P W             P+   GWCNPP+ HFD++QP ++ I  Y AG++PV Y+RVPC KKGG+RFTINGH   +      N    G + ++ I G         V NW  N  S  L   TGQT
Sbjct:  104 VTVTITATNFCP-PNWDL-----------PSDNGGWCNPPRPHFDMAQPAWEKIGIYSAGIIPVIYQRVPCIKKGGVRFTINGHDYFNLVL-VTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHS--LSYLTGQT 226          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 5.852e-18
Identity = 49/112 (43.75%), Postives = 67/112 (59.82%), Query Frame = 1
Query:  271 RLSVLMTPNGACPAPLWSQLPIFAHRTTPSPTMQAGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTING--HFLLSPNC*SPNFGGAGDVHAVSIQG 600
            R +V +T    CP P W+            P+   GWCNPP++HFD+SQP ++ I  YRAG+VPV Y+RV C ++GG+RFT+ G  HF L       N  G+G V AVS++G
Sbjct:   96 RGAVTVTATNLCP-PNWAL-----------PSDGGGWCNPPRRHFDMSQPAWERIGVYRAGIVPVLYRRVRCWRRGGVRFTVGGFDHFEL---VLVANVAGSGSVAAVSVRG 192          

HSP 2 Score: 85.1149 bits (209), Expect = 7.122e-16
Identity = 43/81 (53.09%), Postives = 47/81 (58.02%), Query Frame = 3
Query:  108 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDP--KWCLP-GTIMVTATNFC 341
            WI A ATFY              YGNLY QGYG   AALSTALFN+G +CG CY I C  D   +WC P G + VTATN C
Sbjct:   27 WIPATATFYGGNDGSGTMGGACGYGNLYDQGYGLENAALSTALFNDGAACGQCYLIVCDTDKAGRWCKPRGAVTVTATNLC 107          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 5.852e-18
Identity = 49/125 (39.20%), Postives = 67/125 (53.60%), Query Frame = 1
Query:  274 LSVLMTPNGACPAPLWSQLPIFAHRTTPSPTMQAGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGHFLLSPNC*SPNFGGAGDVHAVSIQG---------V*NWAGN 621
            ++V +T    CP P W+            P+   GWCNPP+ HFD++QP ++ I  YRAG++PV Y+RVPC KKGG+RFTINGH   +      N    G + ++ I G         V NW  N
Sbjct:  120 VTVTVTATNFCP-PNWNL-----------PSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVMYQRVPCVKKGGVRFTINGHDYFNLVL-VTNVATTGSIKSMDIMGSNSTDWMPMVRNWGAN 231          

HSP 2 Score: 91.2781 bits (225), Expect = 9.938e-18
Identity = 45/81 (55.56%), Postives = 51/81 (62.96%), Query Frame = 3
Query:  108 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFC 341
            W+ A ATFY              Y +LYSQGYGT  AALSTALFN+G SCG CY+I C     P+WC PG T+ VTATNFC
Sbjct:   50 WLKAHATFYGGADASGTMGGACGYVDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTVTATNFC 130          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 9.983e-18
Identity = 48/108 (44.44%), Postives = 62/108 (57.41%), Query Frame = 1
Query:  277 SVLMTPNGACPAPLWSQLPIFAHRTTPSPTMQAGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGHFLLSPNC*SPNFGGAGDVHAVSIQG 600
            SV +T    CP       P +A      P    GWCNPP+QHFD+++P +  I  Y  G+VPV Y+RVPC K+GG+RFTING         S N GG G + +VSI+G
Sbjct:  105 SVTITATNLCP-------PNYA-----LPNDAGGWCNPPRQHFDMAEPAWLKIGVYVGGIVPVMYQRVPCAKQGGVRFTINGRDYFELVLVS-NVGGVGSIQSVSIKG 199          

HSP 2 Score: 85.1149 bits (209), Expect = 7.122e-16
Identity = 43/82 (52.44%), Postives = 50/82 (60.98%), Query Frame = 3
Query:  105 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPGT-IMVTATNFC 341
            GW  A ATFY              YG+LYS GYGTNTAALST LFN+G SCG CY I C    D ++C+ GT + +TATN C
Sbjct:   33 GWNKAFATFYGGSDASGTMGGACGYGDLYSTGYGTNTAALSTVLFNDGASCGQCYRIMCDYQADRRFCISGTSVTITATNLC 114          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.298e-17
Identity = 45/87 (51.72%), Postives = 52/87 (59.77%), Query Frame = 3
Query:   90 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFC 341
            A    GW    ATFY              YGNLY+QGYGT TAALSTALF++G SCG CY + C    DP+WC  G ++ VTATNFC
Sbjct:   28 AFAASGWSKGTATFYGGSDASGTMGGACGYGNLYTQGYGTRTAALSTALFDDGASCGQCYALTCDARADPRWCRAGASVTVTATNFC 114          

HSP 2 Score: 85.1149 bits (209), Expect = 7.154e-16
Identity = 46/116 (39.66%), Postives = 66/116 (56.90%), Query Frame = 1
Query:  277 SVLMTPNGACPAPLWSQLPIFAHRTTPSPTMQAGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTING--HFLLSPNC*SPNFGGAGDVHAVSIQGV*NWAG 618
            SV +T    CP       P +A      P+   GWCNPP+ HFD++QP ++ I  YR G+VPVA++RVPC ++GG+RFT+ G  +F L       N   AG V ++ ++G    AG
Sbjct:  105 SVTVTATNFCP-------PNYA-----LPSDDGGWCNPPRPHFDMAQPAWERIGVYRGGIVPVAFRRVPCRRRGGVRFTVAGRDYFEL---VLVTNVAAAGSVRSMEVRGSRRGAG 205          
The following BLAST results are available for this feature:
BLAST of EY674919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
EXPA3_ORYSJ1.393e-1947.27Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP13_ORYSJ2.365e-1954.88Expansin-A13 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP17_ARATH8.989e-1956.10Putative expansin-A17 OS=Arabidopsis thaliana GN=E... [more]
EXP23_ORYSJ1.174e-1856.79Expansin-A23 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP22_ORYSJ1.174e-1855.56Expansin-A22 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP14_ORYSJ4.461e-1855.56Expansin-A14 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP27_ORYSJ5.852e-1843.75Putative expansin-A27 OS=Oryza sativa subsp. japon... [more]
EXP24_ORYSJ5.852e-1839.20Expansin-A24 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA1_ORYSJ9.983e-1844.44Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP29_ORYSJ1.298e-1751.72Expansin-A29 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-B02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674919 ID=EY674919; Name=EY674919; organism=Citrus sinensis; type=EST; length=1026bp
CCACGCGTCCGGGCTTCCAATTTCTCCCCCAAATGTATTTTGCTGGGTTT
TTCTCGTTGGGTTTCCTTGCATTGGTGTCCTCCGTTCATGCTAATGGAGG
CGGTGGGTGGATCAATGCTCGTGCCACTTTCTATGGTGGTGGCGATGCTT
CAGGGACTATGGGTGGGGCTTGTGGCTATGGGAATCTGTATAGCCAGGGT
TATGGAACGAACACTGCAGCCTTGAGCACGGCTTTGTTCAACAACGGTTT
GAGCTGTGGGTCTTGCTATGAGATTAAGTGTGTTAATGACCCCAAATGGT
GCTTGCCCGGCACCATTATGGTCACAGCTACCAATTTTTGCCCACCGAAC
AACGCCCTCCCCAACAATGCAGGCGGGTTGGTGCAATCCTCCGCAGCAAC
ATTTTGATCTCTCTCAGCCTGTGTTCCAACACATTGCTCAATACAGAGCT
GGAGTTGTCCCTGTAGCTTACAAGAGGGTACCCTGCGGAAAAAAGGGAGG
CATCAGGTTCACAATCAATGGCCATTTCCTACTTTCACCTAATTGTTGAT
CACCCAACTTTGGTGGTGCTGGTGATGTTCATGCTGTTTCAATCCAAGGG
GTCTAGAACTGGGCTGGCAACCCCTTGTCAAAAAAACTGGGGCCCAAAAC
TGGGCAAACCAACCCTTTATCTTCAATGGGCCAAAACCCTGTCCTTTTTA
AGGGCCCCCCAAGCCGAAGGGCCCCCCCTGGGGATTTCCTTAAATGGTTT
GCCCCCTGCCTAACCTGGGTCCCTTTTGCCCCAAAATTTTACCCCCGGGG
GCCCAATTTCCCCCCTAAAAACCCCCCCCAAACACCCTTAAAAAAATTTG
GGGTTTTTTAACACCCTTTTTTTTTTACCATAAAAAATTTTTCGGTGGAA
ACAAAATATATTAAAAAATTTTTTTTTATAAAAAAAAAATTTTTTTTCAA
CCCCACCACCACGGGGGGGGTAATATATAAATAATATTAAATATTATAAT
AAAAAAAAAAAAAAAAAAAAAAGAAA
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