EY674919

Overview
NameEY674919
Unique NameEY674919
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.304e-17
Identity = 46/108 (42.59%), Postives = 64/108 (59.26%), Query Frame = 1
Query:  277 SVLMTPNGACPAPLWSQLPIFAHRTTPSPTMQAGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGHFLLSPNC*SPNFGGAGDVHAVSIQG 600
            SV +T    CP P +S+           P+   GWCNPP+QHFD++QP ++ I  YR G+VPV ++RV C +KGG+RFTING+          N GG G + +V I+G
Sbjct:   94 SVTITATNLCP-PDYSK-----------PSNDGGWCNPPRQHFDMAQPAWEQIGVYRGGIVPVNFQRVSCTRKGGVRFTINGNSYFELVL-ITNVGGPGSIKSVQIKG 188          

HSP 2 Score: 85.1149 bits (209), Expect = 7.122e-16
Identity = 41/79 (51.90%), Postives = 51/79 (64.56%), Query Frame = 3
Query:  111 INARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPGT-IMVTATNFC 341
            ++  ATFY              YGNLYS GYGTNTAALS+ALFN+G +CG CY+I C  ++ KWC  GT + +TATN C
Sbjct:   25 LSGTATFYGGSDASGTMGGACGYGNLYSTGYGTNTAALSSALFNDGAACGECYQITCDQSNSKWCKAGTSVTITATNLC 103          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.703e-17
Identity = 50/110 (45.45%), Postives = 65/110 (59.09%), Query Frame = 1
Query:  277 SVLMTPNGACPAPLWSQLPIFAHRTTPSPTMQAGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTING--HFLLSPNC*SPNFGGAGDVHAVSIQG 600
            SV++T    CP       P FA      P    GWCNPP +HFD++QP ++ I  YR G+VPV ++RV C KKGG+RF ING  +F L       N GGAG + +VSI+G
Sbjct:   97 SVVITATNFCP-------PNFA-----LPNNNGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVVFQRVSCYKKGGVRFRINGRDYFELVN---IQNVGGAGSIKSVSIKG 191          

HSP 2 Score: 88.5817 bits (218), Expect = 6.442e-17
Identity = 44/82 (53.66%), Postives = 51/82 (62.20%), Query Frame = 3
Query:  105 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFC 341
            G  N  ATFY              YG+LYS GYGT TAALSTALFN+G SCG CY I C    D +WCL G ++++TATNFC
Sbjct:   25 GLTNGHATFYGGSDASGTMGGACGYGDLYSAGYGTMTAALSTALFNDGASCGECYRITCDHAADSRWCLKGASVVITATNFC 106          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.904e-17
Identity = 51/110 (46.36%), Postives = 67/110 (60.91%), Query Frame = 1
Query:  277 SVLMTPNGACPAPLWSQLPIFAHRTTPSPTMQAGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTING--HFLLSPNC*SPNFGGAGDVHAVSIQG 600
            S+ +T    CP       P +A ++        GWCNPP++HFD+SQP +  IA Y+AG+VPV +KRVPC K GGIRFTI+G  +F L       N GG+G V  VSI+G
Sbjct:   93 SITITATNLCP-------PNYAKKSDAG-----GWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKRVPCQKSGGIRFTISGRDYFELVTVF---NVGGSGVVAQVSIKG 187          

HSP 2 Score: 83.1889 bits (204), Expect = 2.706e-15
Identity = 41/80 (51.25%), Postives = 47/80 (58.75%), Query Frame = 3
Query:  108 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPGT-IMVTATNFC 341
            W  A ATFY              YGNLY+ GYG N AALS+ALFN+G  CG+CY I C  +   WC PGT I +TATN C
Sbjct:   23 WTPATATFYGGSDGAGTMGGACGYGNLYNAGYGLNNAALSSALFNDGAMCGACYTIACDTSQSTWCKPGTSITITATNLC 102          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.451e-17
Identity = 44/110 (40.00%), Postives = 66/110 (60.00%), Query Frame = 1
Query:  277 SVLMTPNGACPAPLWSQLPIFAHRTTPSPTMQAGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTI--NGHFLLSPNC*SPNFGGAGDVHAVSIQG 600
            S ++T    CP P W Q            +   GWCNPP+ HFD+++P F  +A +RAG++PVAY+RVPC + GG+RF    N ++LL       N GGAGD+ +++++G
Sbjct:  105 STVVTATNLCP-PNWYQ-----------DSNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWLL---IFVMNVGGAGDIKSMAVKG 199          

HSP 2 Score: 75.8702 bits (185), Expect = 4.321e-13
Identity = 36/80 (45.00%), Postives = 44/80 (55.00%), Query Frame = 3
Query:  102 GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFC 341
            G W  A ATFY              YGNL++ GYG +TAALST LFN+G  CG C++I C   P      + +VTATN C
Sbjct:   35 GPWRYAHATFYGDETGGETMGGACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSKSPHCYSGKSTVVTATNLC 114          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 7.154e-16
Identity = 44/103 (42.72%), Postives = 61/103 (59.22%), Query Frame = 1
Query:  277 SVLMTPNGACPAPLWSQLPIFAHRTTPSPTMQAGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTING--HFLLSPNC*SPNFGGAGDV 579
            ++ +T    CP P W++ P              GWCNPP+ HFDLS+P F  +A +RAG+VPV Y+RVPC + GG+RF + G  ++LL+      N  GAGDV
Sbjct:  106 AITVTATNLCP-PNWAEDP---------DRGGGGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGLRFALQGNPYWLLAY---VMNVAGAGDV 195          

HSP 2 Score: 77.7962 bits (190), Expect = 1.137e-13
Identity = 39/80 (48.75%), Postives = 47/80 (58.75%), Query Frame = 3
Query:  108 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATNFC 341
            W  A ATFY              YGNLY+ GYGT+TAALST LF +G  CG+CY+++CV     C  G+  I VTATN C
Sbjct:   37 WTPAHATFYGDETASETMGGACGYGNLYASGYGTDTAALSTTLFKDGYGCGTCYQMRCVGTAS-CYRGSPAITVTATNLC 115          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 7.154e-16
Identity = 46/108 (42.59%), Postives = 62/108 (57.41%), Query Frame = 1
Query:  277 SVLMTPNGACPAPLWSQLPIFAHRTTPSPTMQAGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTING-HFLLSPNC*SPNFGGAGDVHAVSIQ 597
            SV++T    CP P W             P    GWCNPP+ HFD++ P F  +AQ  AG+VPV Y+RVPC + GG+RF + G H+ L       N GGAGDV ++S++
Sbjct:  123 SVVITGTNLCP-PNWYL-----------PNDDGGWCNPPRHHFDMAPPSFLKLAQRVAGIVPVQYRRVPCQRTGGVRFCLQGNHYWLLLYV--MNVGGAGDVSSLSVK 216          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 2.072e-15
Identity = 41/82 (50.00%), Postives = 47/82 (57.32%), Query Frame = 3
Query:  105 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFC 341
            GW    ATFY              YGNLY+ GYGTNTAALS+ LFN+G SCG CY I C     P+WC  G  + +TATN C
Sbjct:   26 GWNKGTATFYGGADASGTMGGACGYGNLYTAGYGTNTAALSSVLFNDGWSCGQCYLIMCDAAATPQWCRAGAAVTITATNLC 107          

HSP 2 Score: 82.4185 bits (202), Expect = 4.637e-15
Identity = 41/108 (37.96%), Postives = 62/108 (57.41%), Query Frame = 1
Query:  277 SVLMTPNGACPAPLWSQLPIFAHRTTPSPTMQAGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGHFLLSPNC*SPNFGGAGDVHAVSIQG 600
            +V +T    CP P W+            P+   GWCNPP+ HFD+++P +  I  Y+AG++PV Y++V C ++GGIRFT+ G F         N  G+G V +VS++G
Sbjct:   98 AVTITATNLCP-PNWAL-----------PSNSGGWCNPPRPHFDMAEPAWLQIGIYKAGIIPVLYQQVKCWRQGGIRFTMGG-FNFFELVLVSNVAGSGSVRSVSVKG 192          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 7.874e-15
Identity = 42/81 (51.85%), Postives = 46/81 (56.79%), Query Frame = 3
Query:  108 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND--PKWCLPGT-IMVTATNFC 341
            W  A ATFY              YGNLY QGYG + AALS ALFN+G SCG CY I C     P+WC  GT + VTATN C
Sbjct:   28 WSPATATFYGGSDGSGTMGGACGYGNLYDQGYGVDNAALSQALFNDGASCGQCYLIVCDTSRAPQWCKAGTAVTVTATNLC 108          

HSP 2 Score: 80.4925 bits (197), Expect = 1.762e-14
Identity = 44/110 (40.00%), Postives = 63/110 (57.27%), Query Frame = 1
Query:  277 SVLMTPNGACPAPLWSQLPIFAHRTTPSPTMQAGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTING--HFLLSPNC*SPNFGGAGDVHAVSIQG 600
            +V +T    CP P W+            P+   GWCNPP+ HFD+SQP ++ I  Y+AG+VPV Y+RV C ++GG+RFT+ G  +F L       N  G+G V +  I+G
Sbjct:   99 AVTVTATNLCP-PNWAL-----------PSDGGGWCNPPRPHFDMSQPAWEQIGVYQAGIVPVLYQRVRCWRQGGVRFTVAGLNYFEL---VLITNVAGSGSVASAWIKG 193          
BLAST of EY674919 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.154e-12
Identity = 37/97 (38.14%), Postives = 57/97 (58.76%), Query Frame = 1
Query:  310 APLWSQLPIFAHRTTPSPTMQAGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGKKGGIRFTINGHFLLSPNC*SPNFGGAGDVHAVSIQG 600
            AP W +L       T + T   GWCN  + +FD+SQP +++I  Y AG+VP+ Y++V C + GG+RF ING F         N  G+G + ++S++G
Sbjct:   85 APDWCKL---GKAITVTGTNYGGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQVKCWRYGGVRFIING-FNYFELVLVTNMAGSGSIVSMSVKG 177          

HSP 2 Score: 72.4034 bits (176), Expect = 4.777e-12
Identity = 39/80 (48.75%), Postives = 42/80 (52.50%), Query Frame = 3
Query:  108 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNF 338
            W+   ATFY              YGNLY Q YG N AALST LFN+G SCG CY I C     P WC  G  I VT TN+
Sbjct:   23 WLPGTATFYGGADGSGTMGGACGYGNLYDQRYGINNAALSTPLFNDGASCGQCYLIICDYGKAPDWCKLGKAITVTGTNY 102          
The following BLAST results are available for this feature:
BLAST of EY674919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
EXP12_ORYSJ1.304e-1742.59Expansin-A12 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP11_ARATH1.703e-1745.45Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=... [more]
EXP33_ORYSJ2.904e-1746.36Expansin-A33 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA7_ARATH8.451e-1740.00Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 ... [more]
EXP30_ORYSJ7.154e-1642.72Putative expansin-A30 OS=Oryza sativa subsp. japon... [more]
EXP17_ORYSJ7.154e-1642.59Expansin-A17 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP25_ORYSJ2.072e-1550.00Expansin-A25 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP31_ORYSJ7.874e-1551.85Expansin-A31 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP20_ORYSJ2.154e-1238.14Expansin-A20 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-B02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674919 ID=EY674919; Name=EY674919; organism=Citrus sinensis; type=EST; length=1026bp
CCACGCGTCCGGGCTTCCAATTTCTCCCCCAAATGTATTTTGCTGGGTTT
TTCTCGTTGGGTTTCCTTGCATTGGTGTCCTCCGTTCATGCTAATGGAGG
CGGTGGGTGGATCAATGCTCGTGCCACTTTCTATGGTGGTGGCGATGCTT
CAGGGACTATGGGTGGGGCTTGTGGCTATGGGAATCTGTATAGCCAGGGT
TATGGAACGAACACTGCAGCCTTGAGCACGGCTTTGTTCAACAACGGTTT
GAGCTGTGGGTCTTGCTATGAGATTAAGTGTGTTAATGACCCCAAATGGT
GCTTGCCCGGCACCATTATGGTCACAGCTACCAATTTTTGCCCACCGAAC
AACGCCCTCCCCAACAATGCAGGCGGGTTGGTGCAATCCTCCGCAGCAAC
ATTTTGATCTCTCTCAGCCTGTGTTCCAACACATTGCTCAATACAGAGCT
GGAGTTGTCCCTGTAGCTTACAAGAGGGTACCCTGCGGAAAAAAGGGAGG
CATCAGGTTCACAATCAATGGCCATTTCCTACTTTCACCTAATTGTTGAT
CACCCAACTTTGGTGGTGCTGGTGATGTTCATGCTGTTTCAATCCAAGGG
GTCTAGAACTGGGCTGGCAACCCCTTGTCAAAAAAACTGGGGCCCAAAAC
TGGGCAAACCAACCCTTTATCTTCAATGGGCCAAAACCCTGTCCTTTTTA
AGGGCCCCCCAAGCCGAAGGGCCCCCCCTGGGGATTTCCTTAAATGGTTT
GCCCCCTGCCTAACCTGGGTCCCTTTTGCCCCAAAATTTTACCCCCGGGG
GCCCAATTTCCCCCCTAAAAACCCCCCCCAAACACCCTTAAAAAAATTTG
GGGTTTTTTAACACCCTTTTTTTTTTACCATAAAAAATTTTTCGGTGGAA
ACAAAATATATTAAAAAATTTTTTTTTATAAAAAAAAAATTTTTTTTCAA
CCCCACCACCACGGGGGGGGTAATATATAAATAATATTAAATATTATAAT
AAAAAAAAAAAAAAAAAAAAAAGAAA
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