EY674877

Overview
NameEY674877
Unique NameEY674877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1009
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_GLOMM (Glyceraldehyde-3-phosphate dehydrogenase OS=Glossina morsitans morsitans GN=Gapdh PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 5.185e-27
Identity = 99/236 (41.95%), Postives = 117/236 (49.58%), Query Frame = 2
Query:   92 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLEN--HWSTSFPGTQKNV**GPSSKDWVEG-GRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            KIGINGFGRIGRLV R  L +   E+VAVNDPFI  +YM Y+FKYDS HG++K       D   L+   K +TVF  R+P  I WA  GAEY+VESTGVFT               V+ISAP       +  V                +      APLAK   D F   + GL    H +T+   TQK V  GPS K W +G G   +    S   TGA  K VGK   P L GK
Sbjct:    3 KIGINGFGRIGRLVLRAALDKG-AEVVAVNDPFIDVNYMVYLFKYDSTHGRFKG--TVAADGGFLVVNGKKITVFCERDPTNINWASAGAEYIVESTGVFTTIDKASAHFKGGAKKVVISAPSADAPMFVCGV-NLEAYSPDMKVVSNASCTTNCLAPLAKVIHDNF-EIVEGLMTTVHATTA---TQKTV-DGPSGKLWRDGRGAAQNIIPAS---TGA-AKAVGK-VIPELNGK 224          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P1_JACOR (Glyceraldehyde-3-phosphate dehydrogenase, muscle OS=Jaculus orientalis PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 6.772e-27
Identity = 97/265 (36.60%), Postives = 123/265 (46.42%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKD--------------DKT--------------LLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEG-GRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            VK+G+NGFGRIGRLV R       V++VA+NDPFI  +YM YMFKYDS HG++K   + + D              D T              L+     +T+F  R+P +I W + GAEYVVESTGVFT               VIISAP +     ++ V                +      APLAK   D FG     +E   +T  +   TQK V  GPS+K W +G G   +    S   TGA  K VGK   P L GK
Sbjct:    2 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFKYDSTHGKFKVDIVAINDPFIDLNYMVYMFKYDSTHGKFKGTVKAENGKLVINGHAITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSRDAPMFVMGV-NHEKYDKSLKIVSNASCTTNCLAPLAKVIHDNFGI----VEGLMTTVHAITATQKTV-DGPSAKLWRDGAGAAQNIIPAS---TGA-AKAVGK-VIPELNGK 255          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3PT_MOUSE (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Mus musculus GN=Gapdhs PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.509e-26
Identity = 87/237 (36.71%), Postives = 123/237 (51.90%), Query Frame = 2
Query:   86 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            ++ +GINGFGRIGRLV RV +++  + +VAVNDPFI  +YM YMFKYDS HG++K + ++ K+ + L+     +  +  ++P+EIPW+  G  YVVE TGV+                V+++AP       ++ V                +      APLAK   + FG     +E   +T  S+  TQK V  GPS KDW  GGR  +  +     TGA  K VGK   P L GK
Sbjct:  107 ELTVGINGFGRIGRLVLRVCMEKG-IRVVAVNDPFIDPEYMVYMFKYDSTHGRYKGN-VEHKNGQ-LVVDNLEINTYQCKDPKEIPWSSIGNPYVVECTGVYLSIEAASAHISSGARRVVVTAPSPDAPMFVMGVNEKDYNPGSMTIVSNASCTTNCLAPLAKVIHENFGI----VEGLMTTVHSYTATQKTV-DGPSKKDW-RGGR-GAHQNIIPSSTGA-AKAVGK-VIPELKGK 331          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3PT_BOVIN (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Bos taurus GN=GAPDHS PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.509e-26
Identity = 84/234 (35.90%), Postives = 115/234 (49.15%), Query Frame = 2
Query:   95 IGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            +GINGFGRIGRLV R  +++  V++VAVNDPFI  +YM YMFKYDS HG++K +    K    L+     ++VF  + P+EIPW   G+ +VVE+TGV+                V+I AP       ++ V                +      APLAK   ++FG     LE   +T  S+  TQK V  GPS K W +G      +   +  +    K VGK   P L GK
Sbjct:   65 VGINGFGRIGRLVLRACMEKG-VKVVAVNDPFIDLEYMVYMFKYDSTHGRYKGNVEHKKGQ--LVVDNNEISVFQCKQPKEIPWKSVGSPFVVEATGVYLSLEETKAHIEAGAQRVVICAPSPDAPMFVMGVNEKEYNPSSMKIVSNASCTTNCLAPLAKVIHERFGI----LEGLMTTVHSYTATQKTV-DGPSKKAWRDG---RGAHQNIIPASTGAAKAVGK-VIPDLKGK 286          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3PT_MACFA (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Macaca fascicularis GN=GAPDHS PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 4.389e-26
Identity = 75/205 (36.59%), Postives = 111/205 (54.15%), Query Frame = 2
Query:   86 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEG 694
            ++ +GINGFGRIGRLV R  +++  V++VAVNDPFI  +YM YMFKYDS HG++K   ++ ++ + L+     ++V+  + P++IPW + G+ YVVESTGV+                V+ISAP       ++ V                +      APLAK   ++FG     +E   +T  S+  TQK V  GPS K W +G
Sbjct:   76 ELTVGINGFGRIGRLVLRACMEKG-VKVVAVNDPFIDPEYMVYMFKYDSTHGRYK-GSVEFRNGQ-LVVDNHEISVYQCKEPKQIPWRDVGSPYVVESTGVYLSIEAASNHISAGAQRVVISAPSPDAPTFVMGVNENNYNPGSMNIVSNASCTTNCLAPLAKVIHERFGI----VEGLMTTVHSYTATQKTV-DGPSKKAWRDG 272          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_BOLED (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Boletus edulis GN=GPD PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 5.733e-26
Identity = 89/217 (41.01%), Postives = 111/217 (51.15%), Query Frame = 2
Query:  146 LQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLEN--HWSTSFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            L+  ++ + AVNDPFI  DYM YMFKYDSVHG+++  E+  KD K ++ G K +TVF  R+P  IPW   GA+YVVESTGVFT               VIISAP       +  V                +      APLAK   DKFG  + GL    H +T+   TQK V  GPS KDW  GGR  + N+  +  +    K VGK   P L GK
Sbjct:    1 LENPEINITAVNDPFIDLDYMVYMFKYDSVHGRFEG-EVSTKDGKLVING-KAITVFAERDPANIPWGTVGAQYVVESTGVFTTIEKASAHLKGGAKKVIISAPSSDAPMFVCGV-NLDAYDPKHTVISNASCTTNCLAPLAKVVNDKFG-IVEGLMTTVHATTA---TQKTV-DGPSPKDW-RGGR--AVNNNIIPSSTGAAKAVGK-VIPVLNGK 205          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_AMAMU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Amanita muscaria GN=GPD PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 5.733e-26
Identity = 87/213 (40.85%), Postives = 111/213 (52.11%), Query Frame = 2
Query:  158 DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLEN--HWSTSFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            D+++VA+NDPFI   YM YMFKYDSVHG++    ++ KD K L   +KP+TVF  R+P +IPW   GAEY+VESTGVFT               ++ISAP       +  V                +      APLAK   DKFG  + GL    H +T+   TQK V  GPS+KDW  GGR  S N+  +  +    K VGK   P L GK
Sbjct:    4 DLDVVAINDPFIDLAYMVYMFKYDSVHGRFSG-SVETKDGK-LWINQKPITVFRKRDPVQIPWGSAGAEYIVESTGVFTTTEKASAHLKGGAKKIVISAPSADAPMFVCGV-NLDKYDPKFQVVSNASCTTNCLAPLAKVVNDKFG-IVEGLMTTVHATTA---TQKTV-DGPSAKDW-RGGR--SVNNNIIPSSTGAAKAVGK-VIPELNGK 204          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3PT_HUMAN (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Homo sapiens GN=GAPDHS PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 5.733e-26
Identity = 77/219 (35.16%), Postives = 114/219 (52.05%), Query Frame = 2
Query:   44 HSFTAQFHLSRIMGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWST--SFPGTQKNV**GPSSKDWVEG 694
            H  T    +  +  ++ +GINGFGRIGRLV R  +++  V++VAVNDPFI  +YM YMFKYDS HG++K   ++ ++ + L+     ++V+  + P++IPW   G+ YVVESTGV+                V+ISAP       ++ V                +      APLAK   ++FG     +E   +T  S+  TQK V  GPS K W +G
Sbjct:   61 HPATPPPKMVSVARELTVGINGFGRIGRLVLRACMEKG-VKVVAVNDPFIDPEYMVYMFKYDSTHGRYK-GSVEFRNGQ-LVVDNHEISVYQCKEPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSPDAPMFVMGVNENDYNPGSMNIVSNASCTTNCLAPLAKVIHERFGI----VEGLMTTVHSYTATQKTV-DGPSRKAWRDG 271          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_SCHMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 9.779e-26
Identity = 98/239 (41.00%), Postives = 122/239 (51.05%), Query Frame = 2
Query:   80 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF-TXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWSTSFPGTQKNV**GPSSKDWVEG-GRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            M + K+GINGFGRIGRLV R    ++ V++V+VNDPFI  +YM YM K DS HG +   E+  ++ K  + G K ++V   R+P  IPW + GAEYVVESTGVF T               VIISAP       ++ V                +      APLAK   DKF   + GL      SF  TQK V  GPSSK W +G G + +    S   TGA  K VGK   P L GK
Sbjct:    1 MSRAKVGINGFGRIGRLVLRAAFLKNTVDVVSVNDPFIDLEYMVYMIKRDSTHGTFP-GEVSTENGKLKVNG-KLISVHCERDPANIPWDKDGAEYVVESTGVFTTIDKAQAHIKNNRAKKVIISAPSADAPMFVVGV-NENSYEKSMSVVSNASCTTNCLAPLAKVIHDKF-EIVEGLMT-TVHSFTATQKVV-DGPSSKLWRDGRGAMQNIIPAS---TGA-AKAVGK-VIPALNGK 228          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P2_DROME (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Drosophila melanogaster GN=Gapdh2 PE=1 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 2.845e-25
Identity = 95/236 (40.25%), Postives = 116/236 (49.15%), Query Frame = 2
Query:   92 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLEN--HWSTSFPGTQKNV**GPSSKDWVEG-GRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            KIGINGFGRIGRLV R  + +    +VAVNDPFI  +YM Y+FK+DS HG++K       +   L+   + +TVF  R+P  I WA  GAEY+VESTGVFT               VIISAP       +  V                +      APLAK   D F   + GL    H +T+   TQK V  GPS K W +G G   +    S   TGA  K VGK   P L GK
Sbjct:    3 KIGINGFGRIGRLVLRAAIDKG-ANVVAVNDPFIDVNYMVYLFKFDSTHGRFKG--TVAAEGGFLVVNGQKITVFSERDPANINWASAGAEYIVESTGVFTTIDKASTHLKGGAKKVIISAPSADAPMFVCGV-NLDAYKPDMKVVSNASCTTNCLAPLAKVINDNF-EIVEGLMTTVHATTA---TQKTV-DGPSGKLWRDGRGAAQNIIPAS---TGA-AKAVGK-VIPALNGK 224          
The following BLAST results are available for this feature:
BLAST of EY674877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
G3P_GLOMM5.185e-2741.95Glyceraldehyde-3-phosphate dehydrogenase OS=Glossi... [more]
G3P1_JACOR6.772e-2736.60Glyceraldehyde-3-phosphate dehydrogenase, muscle O... [more]
G3PT_MOUSE1.509e-2636.71Glyceraldehyde-3-phosphate dehydrogenase, testis-s... [more]
G3PT_BOVIN1.509e-2635.90Glyceraldehyde-3-phosphate dehydrogenase, testis-s... [more]
G3PT_MACFA4.389e-2636.59Glyceraldehyde-3-phosphate dehydrogenase, testis-s... [more]
G3P_BOLED5.733e-2641.01Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P_AMAMU5.733e-2640.85Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3PT_HUMAN5.733e-2635.16Glyceraldehyde-3-phosphate dehydrogenase, testis-s... [more]
G3P_SCHMA9.779e-2641.00Glyceraldehyde-3-phosphate dehydrogenase OS=Schist... [more]
G3P2_DROME2.845e-2540.25Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Dros... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-F03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674877 ID=EY674877; Name=EY674877; organism=Citrus sinensis; type=EST; length=1009bp
CCACGCGTCCGCTGCTCTCTCTACTCTCTATTTCTTTCTTCACCACTCTT
TCACCGCTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATCGGA
ATCAACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCA
GAGGGACGATGTTGAACTCGTTGCTGTTAATGATCCCTTTATCACAACCG
ATTACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAG
CACCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAA
GCCTGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTG
AGACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACAGACAAG
GATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTC
AGCCCCCCAGCAAGGATGCTCCTATGTTTTGTTGTGGGTGTCATTGAGCA
CTAGTACCAACCAGACCTCAACTTTGTGTCCAATGCTAGCTGGCCCACCA
ACTGCCTTTGCTCCCCTTGCTAAGGGCAATCAAGACAAGTTTGGGCATTG
GTTGAGGGGTTTGGAGAACCACTGGTCCACCTCTTTTCCAGGCACCCAAA
AAAACGTGTGATAGGGCCCATCATCAAAGGATTGGGTAGAGGGGGGGAGG
GTTTCTTCTTTTAACCATACTTCCCTTGACTTAACTGGAGCCTTGATAAA
GGGGGTTGGGAAAGAGTCTTGCCCGCCTTTAATGGGGAAAACACGATCTG
GGAATGGCCTTTCCCCTTGCCCCTCATTTTATTATTTGTTTTAGTGTTGG
TTTCCCCTATCCTAAGGGAGTTGTGTGGAATTGAGACTCTCTTCTTATTG
TATAATTATACTCGAAGATTTGTACCCTTCCAGGGGGCGTAATTCCTCTT
AGAGGGTGGTTTACATCATAATGTGGGGGCGCTTCTATCCCGTGTGAAAT
CCTTCCCTT
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