EY674877

Overview
NameEY674877
Unique NameEY674877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1009
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_ESCBL (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Escherichia blattae GN=gap PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.198e-15
Identity = 76/222 (34.23%), Postives = 107/222 (48.20%), Query Frame = 2
Query:  128 LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPT-AFAPLAKGNQDKFGHWLRGLENHWSTSFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            +V R   +R D+E+VA+ND  +  +YM YM KYDS HG++ +  ++VKD   ++ G+K + V   R+P  + W E G E V E+TG+F                V+++ P +  +   ++V                A   T   APLAK   D FG     +    +T+   TQK V  GPS KDW  GGR +S N      TGA  K VGK   P L GK
Sbjct:    1 IVFRAAQERSDIEIVAIND-LLDAEYMAYMLKYDSTHGRF-NGTVEVKDGHLIVNGKK-IRVTAERDPANLKWNEAGVEVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDST--PMFVRGANFDTYAGQDIVSNASCTTNCLAPLAKVVNDNFGIVEALMTTVHATT--ATQKTV-DGPSHKDW-RGGRGASQNIIP-SSTGA-AKAVGK-VLPELNGK 210          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P2_BACSU (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Bacillus subtilis GN=gapB PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.371e-15
Identity = 42/124 (33.87%), Postives = 72/124 (58.06%), Query Frame = 2
Query:   86 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP 457
            KVK+ INGFGRIGR+V R  +  D +++VA+N  + + + + ++ KYD++HG++    +  +D  +L+   K V +   R+P+++PW E   + VVE+TG F                VI++AP
Sbjct:    2 KVKVAINGFGRIGRMVFRKAMLDDQIQVVAINASY-SAETLAHLIKYDTIHGRYDKEVVAGED--SLIVNGKKVLLLNSRDPKQLPWREYDIDIVVEATGKFNAKDKAMGHIEAGAKKVILTAP 122          

HSP 2 Score: 21.9422 bits (45), Expect = 1.371e-15
Identity = 12/27 (44.44%), Postives = 17/27 (62.96%), Query Frame = 1
Query:  481 VVGVIEH*YQPDLN-FVSNASWPTNCL 558
            V+GV E  +  + +  +SNAS  TNCL
Sbjct:  131 VMGVNEDQFDAERHVIISNASCTTNCL 157          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_SERMA (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Serratia marcescens GN=gap PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.565e-15
Identity = 77/224 (34.38%), Postives = 109/224 (48.66%), Query Frame = 2
Query:  128 LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPT-AFAPLAKGNQDKFGHWLRGLEN--HWSTSFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            +V R   +R D+E+VA+ND  +  +YM YM KYDS HG++ +  ++VKD   ++ G K + V   ++P  + W E G + V E+TG+F                V+++ P +  +   ++V                A   T   APLAK   D FG  + GL    H +T+   TQK V  GPS KDW  GGR +S N      TGA  K VGK   P L GK
Sbjct:    1 IVFRAAQERSDIEIVAIND-LLDAEYMAYMLKYDSTHGRF-NGTVEVKDGHLVVNG-KTIRVTAEKDPANLKWNEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDAT--PMFVRGANFDKYAGQDIVSNASCTTNCLAPLAKVINDNFG-IVEGLMTTVHATTA---TQKTV-DGPSHKDW-RGGRGASQNIIP-SSTGA-AKAVGK-VIPELKGK 210          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P2_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap2 PE=3 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.565e-15
Identity = 59/174 (33.91%), Postives = 87/174 (50.00%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMT--YMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-QQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFG 595
            +++ INGFGRIGR  AR  L R++  +ELVAVND   T+D  T  ++ KYDS+ G+ K+ ++   DD ++    K +     RNPE +PW E   + ++ESTGVFT               V+I+AP +      ++ V                +      AP+AK   DKFG
Sbjct:    2 IRVAINGFGRIGRNFARCWLGRENSNIELVAVND---TSDPRTNAHLLKYDSMLGKLKNVDITA-DDNSITVNGKTIKCVSDRNPENLPWKEWEIDLIIESTGVFTSKEGALKHVNAGAKKVLITAPGKNEDGTFVIGVNHHDYDHNVHHIISNASCTTNCLAPIAKVLNDKFG 171          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_CORGL (Glyceraldehyde-3-phosphate dehydrogenase OS=Corynebacterium glutamicum GN=gap PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 2.044e-15
Identity = 60/173 (34.68%), Postives = 86/173 (49.71%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQR-DDVELVAVNDPFITTDYMTY--MFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLW-VXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFG 595
            +++GINGFGRIGR   R +L+R DD+E+VAVND    TD  T   + K+DS+ G+    E++  DD ++  G K + V+  R+P+ + WA    + V+ESTG FT               VIISAP        ++ V                +      AP+AK   DKFG
Sbjct:    3 IRVGINGFGRIGRNFFRAVLERSDDLEVVAVND---LTDNKTLSTLLKFDSIMGRLGQ-EVEYDDD-SITVGGKRIAVYAERDPKNLDWAAHNVDIVIESTGFFTDANAAKAHIEAGAKKVIISAPASNEDATFVYGVNHESYDPENHNVISGASCTTNCLAPMAKVLNDKFG 170          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P2_RHOSH (Glyceraldehyde-3-phosphate dehydrogenase B OS=Rhodobacter sphaeroides GN=gapB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.913e-15
Identity = 46/135 (34.07%), Postives = 73/135 (54.07%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQ--RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLW 487
            +++ INGFGRIGR V R I++  R D+E+VA+ND     +   ++ ++DSVHG++         D  +  G  P+ V  +RNP E+PWA  G +  +E TG+FT               V++SAP  G    +++
Sbjct:    3 IRVAINGFGRIGRNVLRAIVESGRTDIEVVAIND-LGQVETNAHLLRFDSVHGRFP--AKVTSGDDWIDVGRGPIKVTAIRNPAELPWA--GVDMAMECTGIFTTKEKAAAHLQNGAKRVLVSAPCDGADRTIVY 132          

HSP 2 Score: 21.1718 bits (43), Expect = 3.913e-15
Identity = 9/11 (81.82%), Postives = 9/11 (81.82%), Query Frame = 1
Query:  526 VSNASWPTNCL 558
            VSNAS  TNCL
Sbjct:  146 VSNASCTTNCL 156          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P1_ESCVU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Escherichia vulneris GN=gap PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.553e-15
Identity = 77/224 (34.38%), Postives = 108/224 (48.21%), Query Frame = 2
Query:  128 LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPT-AFAPLAKGNQDKFGHWLRGLEN--HWSTSFPGTQKNV**GPSSKDWVEGGRVSSFNHTSLDLTGALIKGVGKESCPPLMGK 790
            +V R   +R D+E+VA+ND  +  +YM YM KYDS HG++    ++VKD   ++ G+K + V   R+P  + W E G + V E+TG+F                V+++ P +      ++V                A   T   APLAK   D FG  + GL    H +T+   TQK V  GPS KDW  GGR ++ N      TGA  K VGK   P L GK
Sbjct:    1 IVFRAAQKRSDIEIVAIND-LLDAEYMAYMLKYDSTHGRFDG-TVEVKDGHLVVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSK--DNTPMFVRGANFDTYAGQDIVSNASCTTNCLAPLAKVINDNFG-IVEGLMTTVHATTA---TQKTV-DGPSHKDW-RGGRGAAQNIIP-SSTGA-AKAVGK-VLPELNGK 210          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P3_ECO57 (Glyceraldehyde-3-phosphate dehydrogenase C OS=Escherichia coli O157:H7 GN=gapC PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 7.766e-15
Identity = 73/239 (30.54%), Postives = 113/239 (47.28%), Query Frame = 2
Query:   92 KIGINGFGRIGRLVARVILQ-RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFGHWLRGLENHWSTSFPGTQKNV**GPSSKDWVEGGRVSSFN---HTSLDLTGALIKGVGKESCPPLMGKTR 796
            K+GINGFGRIGRLV R +L+ + ++++VA+ND   +   + Y+ K+DS +G +       +D  +L+   K + V+  +  + IPW   GAE +VE TG +T               V+ISAP  G    +++               + +      AP+AK   D FG  +  +      ++ GTQ  V  GP  KD +   R ++ N   HT    TGA  K +G    P L GK +
Sbjct:    3 KVGINGFGRIGRLVLRRLLEVKSNIDVVAIND-LTSPKILAYLLKHDSNYGPFPWSVDFTED--SLIVDGKSIAVYAEKEAKNIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVLISAP-AGEMKTIVYKVNDDTLDGNDTIVSVASCTTNCLAPMAKALHDSFGIEVGTMTT--IHAYTGTQSLV-DGPRGKD-LRASRAAAENIIPHT----TGA-AKAIGL-VIPELSGKLK 227          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3PA_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Zea mays GN=GAPA PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.110e-14
Identity = 44/130 (33.85%), Postives = 65/130 (50.00%), Query Frame = 2
Query:   86 KVKIGINGFGRIGRLVARVILQRDD---VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQG 466
            K+K+ INGFGRIGR   R    R D   ++++A+ND        +++ KYDS  G +   ++K   D  +    K + V   RNP  +PW E G + V+E TGVF                V+I+AP +G
Sbjct:   67 KLKVAINGFGRIGRNFLRCWHGRGDASPLDVIAINDTG-GVKQASHLLKYDSTLGIFDA-DVKPVGDNAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKG 194          

HSP 2 Score: 31.187 bits (69), Expect = 1.110e-14
Identity = 15/27 (55.56%), Postives = 17/27 (62.96%), Query Frame = 1
Query:  478 FVVGVIEH*YQPDLNFVSNASWPTNCL 558
            +VVGV    Y PD   +SNAS  TNCL
Sbjct:  199 YVVGVNADQYNPDEPIISNASCTTNCL 225          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_BORBU (Glyceraldehyde-3-phosphate dehydrogenase OS=Borrelia burgdorferi GN=gap PE=1 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 1.116e-14
Identity = 39/104 (37.50%), Postives = 68/104 (65.38%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMT--YMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFT 394
            +K+ INGFGRIGR V ++  +R  +++VA+ND    TD  T  ++ KYDS  G + + +++ +D   ++ G + + +   R+P+ +PWA+ G + V+ESTGVF+
Sbjct:    1 MKLAINGFGRIGRNVFKIAFERG-IDIVAIND---LTDPKTLAHLLKYDSTFGVY-NKKVESRDGAIVVDGRE-IKIIAERDPKNLPWAKLGIDVVIESTGVFS 98          

HSP 2 Score: 30.8018 bits (68), Expect = 1.116e-14
Identity = 18/38 (47.37%), Postives = 23/38 (60.53%), Query Frame = 1
Query:  448 LSPPAR-MLLCFVVGVIEH*YQPDLNFVSNASWPTNCL 558
            L+ PA+  +   V+GV +H    DL  VSNAS  TNCL
Sbjct:  121 LTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCTTNCL 158          
The following BLAST results are available for this feature:
BLAST of EY674877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
G3P_ESCBL1.198e-1534.23Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P2_BACSU1.371e-1533.87Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Baci... [more]
G3P_SERMA1.565e-1534.38Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P2_ANAVT1.565e-1533.91Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anab... [more]
G3P_CORGL2.044e-1534.68Glyceraldehyde-3-phosphate dehydrogenase OS=Coryne... [more]
G3P2_RHOSH3.913e-1534.07Glyceraldehyde-3-phosphate dehydrogenase B OS=Rhod... [more]
G3P1_ESCVU4.553e-1534.38Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P3_ECO577.766e-1530.54Glyceraldehyde-3-phosphate dehydrogenase C OS=Esch... [more]
G3PA_MAIZE1.110e-1433.85Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3P_BORBU1.116e-1437.50Glyceraldehyde-3-phosphate dehydrogenase OS=Borrel... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-F03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674877 ID=EY674877; Name=EY674877; organism=Citrus sinensis; type=EST; length=1009bp
CCACGCGTCCGCTGCTCTCTCTACTCTCTATTTCTTTCTTCACCACTCTT
TCACCGCTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATCGGA
ATCAACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCA
GAGGGACGATGTTGAACTCGTTGCTGTTAATGATCCCTTTATCACAACCG
ATTACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAG
CACCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAA
GCCTGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTG
AGACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACAGACAAG
GATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTC
AGCCCCCCAGCAAGGATGCTCCTATGTTTTGTTGTGGGTGTCATTGAGCA
CTAGTACCAACCAGACCTCAACTTTGTGTCCAATGCTAGCTGGCCCACCA
ACTGCCTTTGCTCCCCTTGCTAAGGGCAATCAAGACAAGTTTGGGCATTG
GTTGAGGGGTTTGGAGAACCACTGGTCCACCTCTTTTCCAGGCACCCAAA
AAAACGTGTGATAGGGCCCATCATCAAAGGATTGGGTAGAGGGGGGGAGG
GTTTCTTCTTTTAACCATACTTCCCTTGACTTAACTGGAGCCTTGATAAA
GGGGGTTGGGAAAGAGTCTTGCCCGCCTTTAATGGGGAAAACACGATCTG
GGAATGGCCTTTCCCCTTGCCCCTCATTTTATTATTTGTTTTAGTGTTGG
TTTCCCCTATCCTAAGGGAGTTGTGTGGAATTGAGACTCTCTTCTTATTG
TATAATTATACTCGAAGATTTGTACCCTTCCAGGGGGCGTAATTCCTCTT
AGAGGGTGGTTTACATCATAATGTGGGGGCGCTTCTATCCCGTGTGAAAT
CCTTCCCTT
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