EY674877

Overview
NameEY674877
Unique NameEY674877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1009
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P_HALVA (Glyceraldehyde-3-phosphate dehydrogenase OS=Haloarcula vallismortis GN=gap PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.037e-12
Identity = 43/128 (33.59%), Postives = 66/128 (51.56%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFG--EKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQG 466
            V++G+NGFGRIGR V R  L  DDVE+V +ND    ++ + Y  +YDSV G+ +   +   DD  L     +    +F   +P ++PW +   +   E+TG+F                V+ISAP +G
Sbjct:    6 VRVGLNGFGRIGRNVFRASLHSDDVEIVGINDVMDDSE-IDYFAQYDSVMGELEGASV---DDGVLTVDGTDFEAGIFHETDPTQLPWDDLDVDVAFEATGIFRTKEDASQHLDAGADKVLISAPPKG 129          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3PA_PEA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Pisum sativum GN=GAPA PE=2 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 9.944e-12
Identity = 44/129 (34.11%), Postives = 64/129 (49.61%), Query Frame = 2
Query:   86 KVKIGINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQG 466
            ++K+ INGFGRIGR   R    R D  ++++A+ND        +++ KYDS  G +      V  D   + G K + V   RNP  +PW E G + V+E TGVF                V+I+AP +G
Sbjct:   70 QLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTG-GVKQASHLLKYDSTLGIFDADVKPVGTDGISVDG-KVIKVVSDRNPANLPWKELGIDLVIEGTGVFVDREGAGRHITAGAKKVLITAPGKG 196          

HSP 2 Score: 25.0238 bits (53), Expect = 9.944e-12
Identity = 13/27 (48.15%), Postives = 16/27 (59.26%), Query Frame = 1
Query:  478 FVVGVIEH*YQPDLNFVSNASWPTNCL 558
            +VVGV    Y    + +SNAS  TNCL
Sbjct:  201 YVVGVNADAYTHADDIISNASCTTNCL 227          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P1_STAES (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gapA1 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.371e-11
Identity = 49/169 (28.99%), Postives = 82/169 (48.52%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFG 595
            +K+ INGFGRIGRL  R I   + +E+VAVND     D + ++ KYD++ G++   E++V +    + G K +  F   +  ++PW +   + V+E TG +T               V+ISAP +G    +++                 +    + AP+AK   D+FG
Sbjct:    3 IKVAINGFGRIGRLAFRRIQDVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVIEGGFRVNG-KEIKSFDEPDAGKLPWGDLDIDVVLECTGFYTDKEKAQAHIDAGAKKVLISAPAKGDVKTIVFNTNHDTLDGSETVVSGASCTTNSLAPVAKVLSDEFG 168          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: G3P1_STAEQ (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gapA1 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.371e-11
Identity = 49/169 (28.99%), Postives = 82/169 (48.52%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPQQGCSYVLLWVXXXXXXXXXXXXCPMLAGPPTAFAPLAKGNQDKFG 595
            +K+ INGFGRIGRL  R I   + +E+VAVND     D + ++ KYD++ G++   E++V +    + G K +  F   +  ++PW +   + V+E TG +T               V+ISAP +G    +++                 +    + AP+AK   D+FG
Sbjct:    3 IKVAINGFGRIGRLAFRRIQDVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVIEGGFRVNG-KEIKSFDEPDAGKLPWGDLDIDVVLECTGFYTDKEKAQAHIDAGAKKVLISAPAKGDVKTIVFNTNHDTLDGSETVVSGASCTTNSLAPVAKVLSDEFG 168          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: E4PD_SHEPA (D-erythrose-4-phosphate dehydrogenase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=epd PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.686e-11
Identity = 36/126 (28.57%), Postives = 71/126 (56.35%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP 457
            +++ ING+GRIGR + R + +   RD +++VA+N+     + M ++ +YD+ HG++ H ++K+ D++ ++ G+  + +    +P ++PW E   + V E+TGV                 V+IS P
Sbjct:    2 IRVAINGYGRIGRSILRALYESAKRDRIQIVAINE-LAKPEAMLHLTQYDTTHGRF-HTQVKL-DNQHMIIGDDAIKLLHEPDPAKLPWKEMDIDIVFEATGVINDRLECEAHIQAGAKQVLISHP 124          

HSP 2 Score: 21.9422 bits (45), Expect = 1.686e-11
Identity = 11/26 (42.31%), Postives = 15/26 (57.69%), Query Frame = 1
Query:  481 VVGVIEH*YQPDLNFVSNASWPTNCL 558
            V GV +   + +   VSNAS  TNC+
Sbjct:  134 VFGVNQDLLKAEHTVVSNASCTTNCI 159          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: E4PD_PSEHT (D-erythrose-4-phosphate dehydrogenase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=epd PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 2.840e-11
Identity = 34/104 (32.69%), Postives = 64/104 (61.54%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQR---DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF 391
            +K+ INGFGRIGR + R + +    +++++VA+N+     + + ++ KYD+ HG++    +K+ +D   + G+  + +F   NP E+PW   G + V+E TGV+
Sbjct:    3 IKLAINGFGRIGRNIVRALYESGLSNEIKIVAINE-LADPEAIAHLLKYDTSHGRF-FFPVKLGEDTISVAGDA-IALFCEPNPAELPWKTLGVDVVLECTGVY 103          

HSP 2 Score: 23.0978 bits (48), Expect = 2.840e-11
Identity = 10/26 (38.46%), Postives = 15/26 (57.69%), Query Frame = 1
Query:  481 VVGVIEH*YQPDLNFVSNASWPTNCL 558
            V G+ +   +P+   VSN S  TNC+
Sbjct:  135 VYGINDDELKPEHTIVSNGSCTTNCV 160          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: E4PD_ENT38 (D-erythrose-4-phosphate dehydrogenase OS=Enterobacter sp. (strain 638) GN=epd PE=3 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 6.214e-11
Identity = 35/105 (33.33%), Postives = 62/105 (59.05%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLF-GEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF 391
            V++ INGFGRIGR V R + +   R ++ +VA+N+       M ++ KYD+ HG++      V+ ++  LF G+  + V   ++ + +PW E G + V++ TGV+
Sbjct:    3 VRVAINGFGRIGRNVIRALYESGRRAEITVVAINE-LADAVGMAHLLKYDTSHGRFAWD---VRQEREQLFVGDDAIRVLHEQSIDALPWRELGVDVVLDCTGVY 103          

HSP 2 Score: 26.5646 bits (57), Expect = 6.214e-11
Identity = 13/26 (50.00%), Postives = 15/26 (57.69%), Query Frame = 1
Query:  481 VVGVIEH*YQPDLNFVSNASWPTNCL 558
            V GV  H  Q +   VSNAS  TNC+
Sbjct:  135 VYGVNHHELQAEHRIVSNASCTTNCI 160          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: E4PD_YERE8 (D-erythrose-4-phosphate dehydrogenase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=epd PE=3 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 6.216e-11
Identity = 35/104 (33.65%), Postives = 63/104 (60.58%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF 391
            ++I INGFGRIGR V R + +   R ++ +VA+N+     + M ++ KYDS HG++   +++ + DK L  G+  + +      E++PW E G + V++ +GV+
Sbjct:    3 IRIAINGFGRIGRSVLRALYESGRRAEISVVAINE-LANAEGMAHLLKYDSSHGRFA-WDVRQECDK-LYVGDDIIRLIHQPEIEQLPWGELGIDVVLDCSGVY 103          

HSP 2 Score: 25.0238 bits (53), Expect = 6.216e-11
Identity = 13/26 (50.00%), Postives = 14/26 (53.85%), Query Frame = 1
Query:  481 VVGVIEH*YQPDLNFVSNASWPTNCL 558
            V GV     Q D   VSNAS  TNC+
Sbjct:  135 VYGVNHQDLQADHRIVSNASCTTNCI 160          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: E4PD_SHISS (D-erythrose-4-phosphate dehydrogenase OS=Shigella sonnei (strain Ss046) GN=epd PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 8.066e-11
Identity = 35/104 (33.65%), Postives = 60/104 (57.69%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF 391
            V++ INGFGRIGR V R + +   R ++ +VA+N+       M ++ KYD+ HG++     + +D   L  G+  + V   R+ + +PW E G + V++ TGV+
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVY 103          

HSP 2 Score: 22.3274 bits (46), Expect = 8.066e-11
Identity = 11/26 (42.31%), Postives = 15/26 (57.69%), Query Frame = 1
Query:  481 VVGVIEH*YQPDLNFVSNASWPTNCL 558
            V GV +   + +   VSNAS  TNC+
Sbjct:  135 VYGVNQDQLRAEHRIVSNASCTTNCI 160          
BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: E4PD_SHIFL (D-erythrose-4-phosphate dehydrogenase OS=Shigella flexneri GN=epd PE=3 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 8.066e-11
Identity = 35/104 (33.65%), Postives = 60/104 (57.69%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF 391
            V++ INGFGRIGR V R + +   R ++ +VA+N+       M ++ KYD+ HG++     + +D   L  G+  + V   R+ + +PW E G + V++ TGV+
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVY 103          

HSP 2 Score: 22.3274 bits (46), Expect = 8.066e-11
Identity = 11/26 (42.31%), Postives = 15/26 (57.69%), Query Frame = 1
Query:  481 VVGVIEH*YQPDLNFVSNASWPTNCL 558
            V GV +   + +   VSNAS  TNC+
Sbjct:  135 VYGVNQDQLRAEHRIVSNASCTTNCI 160          
The following BLAST results are available for this feature:
BLAST of EY674877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
G3P_HALVA8.037e-1233.59Glyceraldehyde-3-phosphate dehydrogenase OS=Haloar... [more]
G3PA_PEA9.944e-1234.11Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3P1_STAES1.371e-1128.99Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAEQ1.371e-1128.99Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
E4PD_SHEPA1.686e-1128.57D-erythrose-4-phosphate dehydrogenase OS=Shewanell... [more]
E4PD_PSEHT2.840e-1132.69D-erythrose-4-phosphate dehydrogenase OS=Pseudoalt... [more]
E4PD_ENT386.214e-1133.33D-erythrose-4-phosphate dehydrogenase OS=Enterobac... [more]
E4PD_YERE86.216e-1133.65D-erythrose-4-phosphate dehydrogenase OS=Yersinia ... [more]
E4PD_SHISS8.066e-1133.65D-erythrose-4-phosphate dehydrogenase OS=Shigella ... [more]
E4PD_SHIFL8.066e-1133.65D-erythrose-4-phosphate dehydrogenase OS=Shigella ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-F03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674877 ID=EY674877; Name=EY674877; organism=Citrus sinensis; type=EST; length=1009bp
CCACGCGTCCGCTGCTCTCTCTACTCTCTATTTCTTTCTTCACCACTCTT
TCACCGCTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATCGGA
ATCAACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCA
GAGGGACGATGTTGAACTCGTTGCTGTTAATGATCCCTTTATCACAACCG
ATTACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAG
CACCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAA
GCCTGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTG
AGACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACAGACAAG
GATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTC
AGCCCCCCAGCAAGGATGCTCCTATGTTTTGTTGTGGGTGTCATTGAGCA
CTAGTACCAACCAGACCTCAACTTTGTGTCCAATGCTAGCTGGCCCACCA
ACTGCCTTTGCTCCCCTTGCTAAGGGCAATCAAGACAAGTTTGGGCATTG
GTTGAGGGGTTTGGAGAACCACTGGTCCACCTCTTTTCCAGGCACCCAAA
AAAACGTGTGATAGGGCCCATCATCAAAGGATTGGGTAGAGGGGGGGAGG
GTTTCTTCTTTTAACCATACTTCCCTTGACTTAACTGGAGCCTTGATAAA
GGGGGTTGGGAAAGAGTCTTGCCCGCCTTTAATGGGGAAAACACGATCTG
GGAATGGCCTTTCCCCTTGCCCCTCATTTTATTATTTGTTTTAGTGTTGG
TTTCCCCTATCCTAAGGGAGTTGTGTGGAATTGAGACTCTCTTCTTATTG
TATAATTATACTCGAAGATTTGTACCCTTCCAGGGGGCGTAATTCCTCTT
AGAGGGTGGTTTACATCATAATGTGGGGGCGCTTCTATCCCGTGTGAAAT
CCTTCCCTT
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