EY674877 | Citrus Genome Database

Overview


Name	EY674877
Unique Name	EY674877
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	1009

Libraries


Library Name	Type
Sweet orange leaf, infected with CiLV	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: E4PD_ECOL6 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O6 GN=epd PE=3 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 8.066e-11
Identity = 35/104 (33.65%), Postives = 60/104 (57.69%), Query Frame = 2

Query:   89 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF 391
            V++ INGFGRIGR V R + +   R ++ +VA+N+       M ++ KYD+ HG++     + +D   L  G+  + V   R+ + +PW E G + V++ TGV+
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVY 103

HSP 2 Score: 22.3274 bits (46), Expect = 8.066e-11
Identity = 11/26 (42.31%), Postives = 15/26 (57.69%), Query Frame = 1

Query:  481 VVGVIEH*YQPDLNFVSNASWPTNCL 558
            V GV +   + +   VSNAS  TNC+
Sbjct:  135 VYGVNQDQLRAEHRIVSNASCTTNCI 160

BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: E4PD_ECOL5 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=epd PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 8.066e-11
Identity = 35/104 (33.65%), Postives = 60/104 (57.69%), Query Frame = 2

Query:   89 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF 391
            V++ INGFGRIGR V R + +   R ++ +VA+N+       M ++ KYD+ HG++     + +D   L  G+  + V   R+ + +PW E G + V++ TGV+
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVY 103

HSP 2 Score: 22.3274 bits (46), Expect = 8.066e-11
Identity = 11/26 (42.31%), Postives = 15/26 (57.69%), Query Frame = 1

Query:  481 VVGVIEH*YQPDLNFVSNASWPTNCL 558
            V GV +   + +   VSNAS  TNC+
Sbjct:  135 VYGVNQDQLRAEHRIVSNASCTTNCI 160

BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: E4PD_ECOK1 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O1:K1 / APEC GN=epd PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 8.066e-11
Identity = 35/104 (33.65%), Postives = 60/104 (57.69%), Query Frame = 2

Query:   89 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF 391
            V++ INGFGRIGR V R + +   R ++ +VA+N+       M ++ KYD+ HG++     + +D   L  G+  + V   R+ + +PW E G + V++ TGV+
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVY 103

HSP 2 Score: 22.3274 bits (46), Expect = 8.066e-11
Identity = 11/26 (42.31%), Postives = 15/26 (57.69%), Query Frame = 1

Query:  481 VVGVIEH*YQPDLNFVSNASWPTNCL 558
            V GV +   + +   VSNAS  TNC+
Sbjct:  135 VYGVNQDQLRAEHRIVSNASCTTNCI 160

BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: E4PD_ECOHS (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=epd PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 8.066e-11
Identity = 35/104 (33.65%), Postives = 60/104 (57.69%), Query Frame = 2

Query:   89 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF 391
            V++ INGFGRIGR V R + +   R ++ +VA+N+       M ++ KYD+ HG++     + +D   L  G+  + V   R+ + +PW E G + V++ TGV+
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVY 103

HSP 2 Score: 22.3274 bits (46), Expect = 8.066e-11
Identity = 11/26 (42.31%), Postives = 15/26 (57.69%), Query Frame = 1

Query:  481 VVGVIEH*YQPDLNFVSNASWPTNCL 558
            V GV +   + +   VSNAS  TNC+
Sbjct:  135 VYGVNQDQLRAEHRIVSNASCTTNCI 160

BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: E4PD_ECODH (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli (strain K12 / DH10B) GN=epd PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 8.066e-11
Identity = 35/104 (33.65%), Postives = 60/104 (57.69%), Query Frame = 2

Query:   89 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF 391
            V++ INGFGRIGR V R + +   R ++ +VA+N+       M ++ KYD+ HG++     + +D   L  G+  + V   R+ + +PW E G + V++ TGV+
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVY 103

HSP 2 Score: 22.3274 bits (46), Expect = 8.066e-11
Identity = 11/26 (42.31%), Postives = 15/26 (57.69%), Query Frame = 1

Query:  481 VVGVIEH*YQPDLNFVSNASWPTNCL 558
            V GV +   + +   VSNAS  TNC+
Sbjct:  135 VYGVNQDQLRAEHRIVSNASCTTNCI 160

BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: E4PD_ECOBW (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli (strain K12 / BW2952) GN=epd PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 8.066e-11
Identity = 35/104 (33.65%), Postives = 60/104 (57.69%), Query Frame = 2

Query:   89 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF 391
            V++ INGFGRIGR V R + +   R ++ +VA+N+       M ++ KYD+ HG++     + +D   L  G+  + V   R+ + +PW E G + V++ TGV+
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVY 103

HSP 2 Score: 22.3274 bits (46), Expect = 8.066e-11
Identity = 11/26 (42.31%), Postives = 15/26 (57.69%), Query Frame = 1

Query:  481 VVGVIEH*YQPDLNFVSNASWPTNCL 558
            V GV +   + +   VSNAS  TNC+
Sbjct:  135 VYGVNQDQLRAEHRIVSNASCTTNCI 160

BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: E4PD_ECO8A (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O8 (strain IAI1) GN=epd PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 8.066e-11
Identity = 35/104 (33.65%), Postives = 60/104 (57.69%), Query Frame = 2

Query:   89 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF 391
            V++ INGFGRIGR V R + +   R ++ +VA+N+       M ++ KYD+ HG++     + +D   L  G+  + V   R+ + +PW E G + V++ TGV+
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVY 103

HSP 2 Score: 22.3274 bits (46), Expect = 8.066e-11
Identity = 11/26 (42.31%), Postives = 15/26 (57.69%), Query Frame = 1

Query:  481 VVGVIEH*YQPDLNFVSNASWPTNCL 558
            V GV +   + +   VSNAS  TNC+
Sbjct:  135 VYGVNQDQLRAEHRIVSNASCTTNCI 160

BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: E4PD_ECO81 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O81 (strain ED1a) GN=epd PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 8.066e-11
Identity = 35/104 (33.65%), Postives = 60/104 (57.69%), Query Frame = 2

Query:   89 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF 391
            V++ INGFGRIGR V R + +   R ++ +VA+N+       M ++ KYD+ HG++     + +D   L  G+  + V   R+ + +PW E G + V++ TGV+
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVY 103

HSP 2 Score: 22.3274 bits (46), Expect = 8.066e-11
Identity = 11/26 (42.31%), Postives = 15/26 (57.69%), Query Frame = 1

Query:  481 VVGVIEH*YQPDLNFVSNASWPTNCL 558
            V GV +   + +   VSNAS  TNC+
Sbjct:  135 VYGVNQDQLRAEHRIVSNASCTTNCI 160

BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: E4PD_ECO5E (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=epd PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 8.066e-11
Identity = 35/104 (33.65%), Postives = 60/104 (57.69%), Query Frame = 2

Query:   89 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF 391
            V++ INGFGRIGR V R + +   R ++ +VA+N+       M ++ KYD+ HG++     + +D   L  G+  + V   R+ + +PW E G + V++ TGV+
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVY 103

HSP 2 Score: 22.3274 bits (46), Expect = 8.066e-11
Identity = 11/26 (42.31%), Postives = 15/26 (57.69%), Query Frame = 1

Query:  481 VVGVIEH*YQPDLNFVSNASWPTNCL 558
            V GV +   + +   VSNAS  TNC+
Sbjct:  135 VYGVNQDQLRAEHRIVSNASCTTNCI 160

BLAST of EY674877 vs. ExPASy Swiss-Prot
Match: E4PD_ECO57 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O157:H7 GN=epd PE=3 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 8.066e-11
Identity = 35/104 (33.65%), Postives = 60/104 (57.69%), Query Frame = 2

Query:   89 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF 391
            V++ INGFGRIGR V R + +   R ++ +VA+N+       M ++ KYD+ HG++     + +D   L  G+  + V   R+ + +PW E G + V++ TGV+
Sbjct:    3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVY 103

HSP 2 Score: 22.3274 bits (46), Expect = 8.066e-11
Identity = 11/26 (42.31%), Postives = 15/26 (57.69%), Query Frame = 1

Query:  481 VVGVIEH*YQPDLNFVSNASWPTNCL 558
            V GV +   + +   VSNAS  TNC+
Sbjct:  135 VYGVNQDQLRAEHRIVSNASCTTNCI 160

The following BLAST results are available for this feature:

BLAST of EY674877 vs. ExPASy Swiss-Prot

BLAST of EY674877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274


Match Name	E-value	Identity	Description
E4PD_ECOL6	8.066e-11	33.65	D-erythrose-4-phosphate dehydrogenase OS=Escherich...	[more]
E4PD_ECOL5	8.066e-11	33.65	D-erythrose-4-phosphate dehydrogenase OS=Escherich...	[more]
E4PD_ECOK1	8.066e-11	33.65	D-erythrose-4-phosphate dehydrogenase OS=Escherich...	[more]
E4PD_ECOHS	8.066e-11	33.65	D-erythrose-4-phosphate dehydrogenase OS=Escherich...	[more]
E4PD_ECODH	8.066e-11	33.65	D-erythrose-4-phosphate dehydrogenase OS=Escherich...	[more]
E4PD_ECOBW	8.066e-11	33.65	D-erythrose-4-phosphate dehydrogenase OS=Escherich...	[more]
E4PD_ECO8A	8.066e-11	33.65	D-erythrose-4-phosphate dehydrogenase OS=Escherich...	[more]
E4PD_ECO81	8.066e-11	33.65	D-erythrose-4-phosphate dehydrogenase OS=Escherich...	[more]
E4PD_ECO5E	8.066e-11	33.65	D-erythrose-4-phosphate dehydrogenase OS=Escherich...	[more]
E4PD_ECO57	8.066e-11	33.65	D-erythrose-4-phosphate dehydrogenase OS=Escherich...	[more]

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Properties


Property Name	Value
Genbank description	CS00-C1-401-002-F03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY674877 ID=EY674877; Name=EY674877; organism=Citrus sinensis; type=EST; length=1009bp
CCACGCGTCCGCTGCTCTCTCTACTCTCTATTTCTTTCTTCACCACTCTT
TCACCGCTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATCGGA
ATCAACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCA
GAGGGACGATGTTGAACTCGTTGCTGTTAATGATCCCTTTATCACAACCG
ATTACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAG
CACCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAA
GCCTGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTG
AGACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACAGACAAG
GATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTC
AGCCCCCCAGCAAGGATGCTCCTATGTTTTGTTGTGGGTGTCATTGAGCA
CTAGTACCAACCAGACCTCAACTTTGTGTCCAATGCTAGCTGGCCCACCA
ACTGCCTTTGCTCCCCTTGCTAAGGGCAATCAAGACAAGTTTGGGCATTG
GTTGAGGGGTTTGGAGAACCACTGGTCCACCTCTTTTCCAGGCACCCAAA
AAAACGTGTGATAGGGCCCATCATCAAAGGATTGGGTAGAGGGGGGGAGG
GTTTCTTCTTTTAACCATACTTCCCTTGACTTAACTGGAGCCTTGATAAA
GGGGGTTGGGAAAGAGTCTTGCCCGCCTTTAATGGGGAAAACACGATCTG
GGAATGGCCTTTCCCCTTGCCCCTCATTTTATTATTTGTTTTAGTGTTGG
TTTCCCCTATCCTAAGGGAGTTGTGTGGAATTGAGACTCTCTTCTTATTG
TATAATTATACTCGAAGATTTGTACCCTTCCAGGGGGCGTAATTCCTCTT
AGAGGGTGGTTTACATCATAATGTGGGGGCGCTTCTATCCCGTGTGAAAT
CCTTCCCTT