EY674839

Overview
NameEY674839
Unique NameEY674839
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACTB_ORYLA (Actin, cytoplasmic 1 OS=Oryzias latipes GN=actb PE=2 SV=2)

HSP 1 Score: 243.817 bits (621), Expect = 1.025e-63
Identity = 129/173 (74.57%), Postives = 137/173 (79.19%), Query Frame = 2 
Query:    8 EDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            +DI  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV HTV I
Sbjct:    3 DDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--SPAMYVAIQAVLSL--------YASGRTTGIVMDSGDGVTHTVPI 165
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACTB_MOUSE (Actin, cytoplasmic 1 OS=Mus musculus GN=Actb PE=1 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 1.025e-63
Identity = 130/173 (75.14%), Postives = 137/173 (79.19%), Query Frame = 2 
Query:    8 EDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            +DI  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV HTV I
Sbjct:    3 DDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVMDSGDGVTHTVPI 165
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACTB_MESAU (Actin, cytoplasmic 1 OS=Mesocricetus auratus GN=ACTB PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 1.025e-63
Identity = 130/173 (75.14%), Postives = 137/173 (79.19%), Query Frame = 2 
Query:    8 EDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            +DI  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV HTV I
Sbjct:    3 DDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVMDSGDGVTHTVPI 165
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACTB_MACFA (Actin, cytoplasmic 1 OS=Macaca fascicularis GN=ACTB PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 1.025e-63
Identity = 130/173 (75.14%), Postives = 137/173 (79.19%), Query Frame = 2 
Query:    8 EDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            +DI  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV HTV I
Sbjct:    3 DDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVMDSGDGVTHTVPI 165
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACTB_HUMAN (Actin, cytoplasmic 1 OS=Homo sapiens GN=ACTB PE=1 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 1.025e-63
Identity = 130/173 (75.14%), Postives = 137/173 (79.19%), Query Frame = 2 
Query:    8 EDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            +DI  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV HTV I
Sbjct:    3 DDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVMDSGDGVTHTVPI 165
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACTB_HORSE (Actin, cytoplasmic 1 OS=Equus caballus GN=ACTB PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 1.025e-63
Identity = 130/173 (75.14%), Postives = 137/173 (79.19%), Query Frame = 2 
Query:    8 EDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            +DI  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV HTV I
Sbjct:    3 DDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVMDSGDGVTHTVPI 165
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACTB_CRIGR (Actin, cytoplasmic 1 OS=Cricetulus griseus GN=ACTB PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 1.025e-63
Identity = 130/173 (75.14%), Postives = 137/173 (79.19%), Query Frame = 2 
Query:    8 EDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            +DI  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV HTV I
Sbjct:    3 DDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVMDSGDGVTHTVPI 165
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACTB_CHICK (Actin, cytoplasmic 1 OS=Gallus gallus GN=ACTB PE=1 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 1.025e-63
Identity = 130/173 (75.14%), Postives = 137/173 (79.19%), Query Frame = 2 
Query:    8 EDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            +DI  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV HTV I
Sbjct:    3 DDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVMDSGDGVTHTVPI 165
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACTB_CERAE (Actin, cytoplasmic 1 OS=Cercopithecus aethiops GN=ACTB PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 1.025e-63
Identity = 130/173 (75.14%), Postives = 137/173 (79.19%), Query Frame = 2 
Query:    8 EDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            +DI  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV HTV I
Sbjct:    3 DDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVMDSGDGVTHTVPI 165
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACTB_CAVPO (Actin, cytoplasmic 1 OS=Cavia porcellus GN=ACTB PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 1.025e-63
Identity = 130/173 (75.14%), Postives = 137/173 (79.19%), Query Frame = 2 
Query:    8 EDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            +DI  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV HTV I
Sbjct:    3 DDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVMDSGDGVTHTVPI 165
The following BLAST results are available for this feature:
BLAST of EY674839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 437
Match NameE-valueIdentityDescription
ACTB_ORYLA1.025e-6374.57Actin, cytoplasmic 1 OS=Oryzias latipes GN=actb PE... [more]
ACTB_MOUSE1.025e-6375.14Actin, cytoplasmic 1 OS=Mus musculus GN=Actb PE=1 ... [more]
ACTB_MESAU1.025e-6375.14Actin, cytoplasmic 1 OS=Mesocricetus auratus GN=AC... [more]
ACTB_MACFA1.025e-6375.14Actin, cytoplasmic 1 OS=Macaca fascicularis GN=ACT... [more]
ACTB_HUMAN1.025e-6375.14Actin, cytoplasmic 1 OS=Homo sapiens GN=ACTB PE=1 ... [more]
ACTB_HORSE1.025e-6375.14Actin, cytoplasmic 1 OS=Equus caballus GN=ACTB PE=... [more]
ACTB_CRIGR1.025e-6375.14Actin, cytoplasmic 1 OS=Cricetulus griseus GN=ACTB... [more]
ACTB_CHICK1.025e-6375.14Actin, cytoplasmic 1 OS=Gallus gallus GN=ACTB PE=1... [more]
ACTB_CERAE1.025e-6375.14Actin, cytoplasmic 1 OS=Cercopithecus aethiops GN=... [more]
ACTB_CAVPO1.025e-6375.14Actin, cytoplasmic 1 OS=Cavia porcellus GN=ACTB PE... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-B12-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674839 ID=EY674839; Name=EY674839; organism=Citrus sinensis; type=EST; length=922bp
CGATGCTGAGGATATTCACCCCCTTGTTTGTGACAATGGAACTGGAATGG
TGAAGGCTGGATTTGCTGGAGATGATGCTCCAAGGGCAGTATTCCCTAGT
ATTGTTGGTAGGCCTCGACACACTGGAGTCATGGTTGGAATGGGGCAGAA
GGATGCCTATGTTGGTGATGAGGCCCAATCGAAAAGAGGTATTCTTACTT
TGAAATACCCAATTGAGCACGGTATTGTAAGCAACTGGGATGATATGGAA
AAGATCTGGCATCATACCTTCTACAACGAGCTTCGTGTTGCTCCTGAAGA
GCACCCAGTGCTTCTCACTGAGGCACCTCTTAACCCCAAGGCCAACAGAG
AGAAGATGACCCAAATTATGTTTTGAAAACTTTCAATGTGCCAGCCATGT
ACGTTTGCCATCCAGGCTGTTCTATCTCTTTTATGCCAGTGGTCGTACAA
ATGGTATTGTGCTGGATTCTGGGTGAAAGGTGTGGCTCATACTGTAACCA
TTTTATAAAAGGAAATGCCCTTCCCTCATGGCCATTCCTCGTTTGGACTT
TGGCGGGTCATAATCTCAATGGATGCCTTTGAAGAAAATTCTTACCTGAA
AGAAGTTAAAATGTATAACCAACCCCGCCCAAATGGGAAATTTTTCCACT
GTCATGAAAAGAAAAATCTTTCTTTTTTTTTTCCCCTAAAAAATATATAC
CAAAAACCTTAAAAACCGCCACAAAACACTCCCTTCTCTTTTTTAGAAAA
AACATTAAAACTCACCTATAAAAACAAAAAAAAACACCAATTTGGAACAA
AAAAAAATCACTTTGTGCCCAAAAAATATATTATTCAAAACCACCCCTCT
CAACGGAGAAGGGAAACATCCGGCCGGGGATTCTAATATGAACCCAACAC
TCCCACCCTAACCAACCCCTCT
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