EY674839

Overview
NameEY674839
Unique NameEY674839
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACTG_HUMAN (Actin, cytoplasmic 2 OS=Homo sapiens GN=ACTG1 PE=1 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.339e-63
Identity = 130/173 (75.14%), Postives = 137/173 (79.19%), Query Frame = 2 
Query:    8 EDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            E+I  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV HTV I
Sbjct:    3 EEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVMDSGDGVTHTVPI 165
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACTG_CHICK (Actin, cytoplasmic 2 OS=Gallus gallus GN=ACTG1 PE=1 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.339e-63
Identity = 130/173 (75.14%), Postives = 137/173 (79.19%), Query Frame = 2 
Query:    8 EDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            E+I  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV HTV I
Sbjct:    3 EEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVMDSGDGVTHTVPI 165
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACTG_BOVIN (Actin, cytoplasmic 2 OS=Bos taurus GN=ACTG1 PE=1 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.339e-63
Identity = 130/173 (75.14%), Postives = 137/173 (79.19%), Query Frame = 2 
Query:    8 EDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            E+I  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV HTV I
Sbjct:    3 EEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVMDSGDGVTHTVPI 165
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACTB1_DANRE (Actin, cytoplasmic 1 OS=Danio rerio GN=actba PE=2 SV=2)

HSP 1 Score: 243.432 bits (620), Expect = 1.339e-63
Identity = 130/173 (75.14%), Postives = 137/173 (79.19%), Query Frame = 2 
Query:    8 EDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            E+I  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV HTV I
Sbjct:    3 EEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVMDSGDGVTHTVPI 165
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACT8_XENLA (Actin, cytoplasmic type 8 OS=Xenopus laevis PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.339e-63
Identity = 130/173 (75.14%), Postives = 137/173 (79.19%), Query Frame = 2 
Query:    8 EDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            E+I  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV HTV I
Sbjct:    4 EEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVMDSGDGVTHTVPI 166
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACT5_XENLA (Actin, cytoplasmic type 5 OS=Xenopus laevis PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.339e-63
Identity = 130/173 (75.14%), Postives = 137/173 (79.19%), Query Frame = 2 
Query:    8 EDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            E+I  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV HTV I
Sbjct:    4 EEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVMDSGDGVTHTVPI 166
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACT5_CHICK (Actin, cytoplasmic type 5 OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.339e-63
Identity = 130/173 (75.14%), Postives = 137/173 (79.19%), Query Frame = 2 
Query:    8 EDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            E+I  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV HTV I
Sbjct:    4 EEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVMDSGDGVTHTVPI 166
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACT5C_ANOGA (Actin-5C OS=Anopheles gambiae GN=Act5C PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.339e-63
Identity = 129/173 (74.57%), Postives = 138/173 (79.77%), Query Frame = 2 
Query:    8 EDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            E++  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV+HTV I
Sbjct:    4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVLDSGDGVSHTVPI 166
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACT4_BOMMO (Actin, cytoplasmic A4 OS=Bombyx mori GN=A4 PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.339e-63
Identity = 129/173 (74.57%), Postives = 138/173 (79.77%), Query Frame = 2 
Query:    8 EDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            E++  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF   +   P  + AIQAVLSL        Y +G           GV+HTV I
Sbjct:    4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN--TPAMYVAIQAVLSL--------YASGRTTGIVLDSGDGVSHTVPI 166
[Close]
BLAST of EY674839 vs. ExPASy Swiss-Prot
Match: ACT3_DIPDE (Actin-3 OS=Diphyllobothrium dendriticum GN=ACT3 PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.339e-63
Identity = 129/173 (74.57%), Postives = 137/173 (79.19%), Query Frame = 2 
Query:    8 EDIHPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF*KLSMCQPCTF-AIQAVLSLLCQWSYKWYCAGFWV-------KGVAHTVTI 502
            ED+  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI+F   +   P  + AIQAVLSL        Y +G           GV HTV I
Sbjct:    5 EDVGALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIVFETFN--SPAMYVAIQAVLSL--------YASGRTTGIVLDSGDGVTHTVPI 167
The following BLAST results are available for this feature:
BLAST of EY674839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 437
Match NameE-valueIdentityDescription
ACTG_HUMAN1.339e-6375.14Actin, cytoplasmic 2 OS=Homo sapiens GN=ACTG1 PE=1... [more]
ACTG_CHICK1.339e-6375.14Actin, cytoplasmic 2 OS=Gallus gallus GN=ACTG1 PE=... [more]
ACTG_BOVIN1.339e-6375.14Actin, cytoplasmic 2 OS=Bos taurus GN=ACTG1 PE=1 S... [more]
ACTB1_DANRE1.339e-6375.14Actin, cytoplasmic 1 OS=Danio rerio GN=actba PE=2 ... [more]
ACT8_XENLA1.339e-6375.14Actin, cytoplasmic type 8 OS=Xenopus laevis PE=3 S... [more]
ACT5_XENLA1.339e-6375.14Actin, cytoplasmic type 5 OS=Xenopus laevis PE=3 S... [more]
ACT5_CHICK1.339e-6375.14Actin, cytoplasmic type 5 OS=Gallus gallus PE=3 SV... [more]
ACT5C_ANOGA1.339e-6374.57Actin-5C OS=Anopheles gambiae GN=Act5C PE=2 SV=1[more]
ACT4_BOMMO1.339e-6374.57Actin, cytoplasmic A4 OS=Bombyx mori GN=A4 PE=2 SV... [more]
ACT3_DIPDE1.339e-6374.57Actin-3 OS=Diphyllobothrium dendriticum GN=ACT3 PE... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-B12-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674839 ID=EY674839; Name=EY674839; organism=Citrus sinensis; type=EST; length=922bp
CGATGCTGAGGATATTCACCCCCTTGTTTGTGACAATGGAACTGGAATGG
TGAAGGCTGGATTTGCTGGAGATGATGCTCCAAGGGCAGTATTCCCTAGT
ATTGTTGGTAGGCCTCGACACACTGGAGTCATGGTTGGAATGGGGCAGAA
GGATGCCTATGTTGGTGATGAGGCCCAATCGAAAAGAGGTATTCTTACTT
TGAAATACCCAATTGAGCACGGTATTGTAAGCAACTGGGATGATATGGAA
AAGATCTGGCATCATACCTTCTACAACGAGCTTCGTGTTGCTCCTGAAGA
GCACCCAGTGCTTCTCACTGAGGCACCTCTTAACCCCAAGGCCAACAGAG
AGAAGATGACCCAAATTATGTTTTGAAAACTTTCAATGTGCCAGCCATGT
ACGTTTGCCATCCAGGCTGTTCTATCTCTTTTATGCCAGTGGTCGTACAA
ATGGTATTGTGCTGGATTCTGGGTGAAAGGTGTGGCTCATACTGTAACCA
TTTTATAAAAGGAAATGCCCTTCCCTCATGGCCATTCCTCGTTTGGACTT
TGGCGGGTCATAATCTCAATGGATGCCTTTGAAGAAAATTCTTACCTGAA
AGAAGTTAAAATGTATAACCAACCCCGCCCAAATGGGAAATTTTTCCACT
GTCATGAAAAGAAAAATCTTTCTTTTTTTTTTCCCCTAAAAAATATATAC
CAAAAACCTTAAAAACCGCCACAAAACACTCCCTTCTCTTTTTTAGAAAA
AACATTAAAACTCACCTATAAAAACAAAAAAAAACACCAATTTGGAACAA
AAAAAAATCACTTTGTGCCCAAAAAATATATTATTCAAAACCACCCCTCT
CAACGGAGAAGGGAAACATCCGGCCGGGGATTCTAATATGAACCCAACAC
TCCCACCCTAACCAACCCCTCT
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