EY674798

Overview
NameEY674798
Unique NameEY674798
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1032
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674798 vs. ExPASy Swiss-Prot
Match: PDXB_PSEMY (Erythronate-4-phosphate dehydrogenase OS=Pseudomonas mendocina (strain ymp) GN=pdxB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.755e-13
Identity = 40/98 (40.82%), Postives = 56/98 (57.14%), Query Frame = 1
Query:  211 QIGATFAKIMAGFGCQLLAYNPYPNPQVEALGARYVSLHELLGESQIISLHCPLTADSKHLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKEGP 504
            Q+G     ++ G G Q+   +P   P+  A G  +VSL  ++ E  +ISLH PL A ++HL +A  LA +QPGA LIN  RG +VD  AL   L + P
Sbjct:  126 QVGGRLVHLLRGLGWQVRVCDP---PRQAAEGGDFVSLERIIEECDVISLHTPLDASTRHLFDATRLAALQPGAWLINASRGAVVDNAALRTLLPQRP 220          
BLAST of EY674798 vs. ExPASy Swiss-Prot
Match: GHRB_SHIBS (Glyoxylate/hydroxypyruvate reductase B OS=Shigella boydii serotype 4 (strain Sb227) GN=ghrB PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 9.755e-13
Identity = 56/177 (31.64%), Postives = 83/177 (46.89%), Query Frame = 1
Query:    7 AANAWACTIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLH---GLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQL-LAYNP--YPNPQVEALGARYVSLHELLGESQIISLHCPLTADSKHLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKEGPLGYLG 519
            A  A    ++  P      VA+  +AL+L+  RR+     R + G+++        G D+           +IG   A+  A FG  + + YN   +     E   ARY  L  LL ES  + L  PLT ++ HL  A+  A M+P A+ IN GRG +VD  ALI AL++G +   G
Sbjct:   84 ALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQ-RAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKPSAIFINAGRGPVVDENALIAALQKGEIHAAG 259          
BLAST of EY674798 vs. ExPASy Swiss-Prot
Match: GHRB_ERWCT (Glyoxylate/hydroxypyruvate reductase B OS=Erwinia carotovora subsp. atroseptica GN=ghrB PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 9.755e-13
Identity = 57/177 (32.20%), Postives = 83/177 (46.89%), Query Frame = 1
Query:    7 AANAWACTIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSL---HGLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQL-LAYNP--YPNPQVEALGARYVSLHELLGESQIISLHCPLTADSKHLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKEGPLGYLG 519
            A N     ++  P      VA+  +AL+LA  RR+     R + G++         G D+           +IG   A+  A FG  + + YN   +     E   AR+  L  LL ES  + +  PLTA++ HLI  + LA M+P A+LIN GRG +VD  AL  AL +G +   G
Sbjct:   80 ALNEKGVILMHTPTVLTETVADTVLALMLASARRVVEVVERVKAGEWKGGVGSDWFGTDVHHKTIGILGMGRIGLAVAQ-RAHFGFSMPVLYNARRHHAEAEERFNARHCDLDTLLAESDFLCITLPLTAETHHLIGREQLAKMKPSAILINIGRGAVVDEDALTEALVKGTIQAAG 255          
BLAST of EY674798 vs. ExPASy Swiss-Prot
Match: FDH_PICAN (Formate dehydrogenase OS=Pichia angusta GN=FMDH PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 9.755e-13
Identity = 53/171 (30.99%), Postives = 87/171 (50.88%), Query Frame = 1
Query:   28 TIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLT--GFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYNPYPNPQVEA---LGARYV-SLHELLGESQIISLHCPLTADSKHLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKEGPL-GYLG 519
            +++ V   +  +VAEH V  +L L R    A+ +   G +++  +    FD+           +IG    + +  F  + L Y  Y +   EA   +GAR V  + EL+ ++ I++++CPL A SK L+NA+ L H + GA L+NT RG +     +  A+K G L GY G
Sbjct:  111 SVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIISGGWNVAEIAKDSFDIEGKVIATIGAGRIGYRVLERLVAFNPKELLYYDYQSLSKEAEEKVGARRVHDIKELVAQADIVTINCPLHAGSKGLVNAELLKHFKKGAWLVNTARGAICVAEDVAAAVKSGQLRGYGG 281          
BLAST of EY674798 vs. ExPASy Swiss-Prot
Match: CTBP2_BOVIN (C-terminal-binding protein 2 OS=Bos taurus GN=CTBP2 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.755e-13
Identity = 59/188 (31.38%), Postives = 81/188 (43.09%), Query Frame = 1
Query:    1 LPAANAWACTIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDF-------------------SLHGLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYNPYPNPQVE-ALGARYV-SLHELLGESQIISLHCPLTADSKHLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKEG 501
            + AA      +  +P+ +    A+  +  IL L RR    Y   R+G                        GL GF             + G   A     FG  +L Y+PY     E +LG + V +L +LL +S  +SLHC L   + HLIN  ++  M+ GA L+N  RGGLVD  AL  ALKEG
Sbjct:  113 IKAAGELGIAVCNIPSAAVEETADSTICHILNLYRRNTWLYQALREGTRVQSVEQIREVASGAARIRGETLGLIGFG------------RTGQAVAVRAKAFGFSVLFYDPYLQDGTERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHLINDFTIKQMRQGAFLVNAARGGLVDEKALAQALKEG 288          
BLAST of EY674798 vs. ExPASy Swiss-Prot
Match: GHRB_ENTAG (Glyoxylate/hydroxypyruvate reductase B OS=Enterobacter agglomerans GN=tkrA PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.274e-12
Identity = 53/169 (31.36%), Postives = 80/169 (47.34%), Query Frame = 1
Query:    7 AANAWACTIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLH---GLTGFDLXXXXXXXXXXXQIGATFA-KIMAGFGCQLLAYNPYPNPQVEA-LGARYVSLHELLGESQIISLHCPLTADSKHLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKE 498
            A N     ++  P      VA+  +AL+L+  RR+     R + G++         G D+           +IG   A +   GFG  +L      + + E+   A+Y  L  LL ES  + +  PLT  + H+I  + LA M+P A+LIN GRG +VD  ALI ALK+
Sbjct:   83 ALNQRGIVLIDTPTVLTETVADTMMALVLSSARRVVEVAERVKAGEWRRSIGPDWFGIDVHHKKMGILGMGRIGLALAQRAHHGFGMPILYNARKHHEEAESRFNAQYCDLDTLLRESDFLCISLPLTEQTHHMIGREQLAKMKPSAILINAGRGPVVDEQALIAALKD 251          
BLAST of EY674798 vs. ExPASy Swiss-Prot
Match: FDH_EMENI (Probable formate dehydrogenase OS=Emericella nidulans GN=aciA PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.274e-12
Identity = 57/188 (30.32%), Postives = 92/188 (48.94%), Query Frame = 1
Query:   28 TIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTG--FDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYNPYP--NPQVEA-LGARYV-SLHELLGESQIISLHCPLTADSKHLINAQSLAHMQP-----------------GAMLINTGRGGLVDTPALIHALKEGPL-GYLG 519
            T+  V   +  +VAEH V  IL L R    A+++ R+GD+++  +    FDL           +IG    + +  F C+ L Y  Y    P+VE  +GAR V SL E++ +  +++++CPL   ++ L N + ++ M+P                 G+ L+NT RG +V    +  ALK G L GY G
Sbjct:  107 TVAEVTGSNVVSVAEHVVMTILLLVRNFVPAHDQIRNGDWNVAAVAKNEFDLENKVVGTVGVGRIGERVLRRLKPFDCKELLYYDYQPLRPEVEKEIGARRVDSLEEMVSQCDVVTINCPLHEKTRGLFNKELISKMKPGKSALLYLIIPMLMYHKGSWLVNTARGAIVVKEDVAEALKSGHLRGYGG 294          
BLAST of EY674798 vs. ExPASy Swiss-Prot
Match: YN14_YEAST (Putative 2-hydroxyacid dehydrogenase YNL274C OS=Saccharomyces cerevisiae GN=YNL274C PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.838e-12
Identity = 48/169 (28.40%), Postives = 78/169 (46.15%), Query Frame = 1
Query:   31 IVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLT-----GFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAY-NPYPNPQVEALGARYVSLHELLGESQIISLHCPLTADSKHLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKEGPLGYLG 519
            +  VP    +A A+  V L+L   R       R  +G++   G       G+D            +IG    + +  FG +   Y N +  P  E  G  YV   E L  S I+S++ PL  ++ HLINA+++  M+ G +++NT RG ++D  A+  AL+ G +   G
Sbjct:  108 VANVPDLVSNATADTHVFLLLGALRNFGIGNRRLIEGNWPEAGPACGSPFGYDPEGKTVGILGLGRIGRCILERLKPFGFENFIYHNRHQLPSEEEHGCEYVGFEEFLKRSDIVSVNVPLNHNTHHLINAETIEKMKDGVVIVNTARGAVIDEQAMTDALRSGKIRSAG 276          
BLAST of EY674798 vs. ExPASy Swiss-Prot
Match: SERA_PONAB (D-3-phosphoglycerate dehydrogenase OS=Pongo abelii GN=PHGDH PE=2 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 2.838e-12
Identity = 46/168 (27.38%), Postives = 78/168 (46.43%), Query Frame = 1
Query:    1 LPAANAWACTIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYNPYPNPQVEA-LGARYVSLHELLGESQIISLHCPLTADSKHLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKEG 501
            L AA      ++  P  +  + AE    +I+ L R++ +A    +DG +      G +L           +IG   A  M   G + + Y+P  +P+V A  G + + L E+      I++H PL   +  L+N  + A  + G  ++N  RGG+VD  AL+ AL+ G
Sbjct:   85 LEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVAIRMQSLGMKTIGYDPIISPEVSASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSG 252          
BLAST of EY674798 vs. ExPASy Swiss-Prot
Match: FDH_HORVU (Formate dehydrogenase, mitochondrial OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.838e-12
Identity = 50/179 (27.93%), Postives = 90/179 (50.28%), Query Frame = 1
Query:    1 LPAANAWACTIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLT--GFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYNPYP-NPQVEA-LGARYVS-LHELLGESQIISLHCPLTADSKHLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKEGPL-GYLG 519
            LPAA A   T+ RV   +  +VAE  +  IL L R     Y +   G++++ G+    +DL           + G    + +  F C LL ++    NP++E  +GA++   L  +L +  ++ ++ PLT  ++ + N + +A M+ G +++N  RG ++DT A+  A   G + GY G
Sbjct:  128 LPAAAAAGLTVARVTGSNTVSVAEDELMRILILLRNFLPGYQQVVKGEWNVAGIAHRAYDLEGKTVGTVGAGRYGRLLLQRLKPFNCNLLYHDRLQINPELEKEIGAKFEEDLDAMLPKCDVVVINTPLTEKTRGMFNKEKIAKMKKGVIIVNNARGAIMDTQAVADACSSGHIAGYGG 306          
The following BLAST results are available for this feature:
BLAST of EY674798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
PDXB_PSEMY9.755e-1340.82Erythronate-4-phosphate dehydrogenase OS=Pseudomon... [more]
GHRB_SHIBS9.755e-1331.64Glyoxylate/hydroxypyruvate reductase B OS=Shigella... [more]
GHRB_ERWCT9.755e-1332.20Glyoxylate/hydroxypyruvate reductase B OS=Erwinia ... [more]
FDH_PICAN9.755e-1330.99Formate dehydrogenase OS=Pichia angusta GN=FMDH PE... [more]
CTBP2_BOVIN9.755e-1331.38C-terminal-binding protein 2 OS=Bos taurus GN=CTBP... [more]
GHRB_ENTAG1.274e-1231.36Glyoxylate/hydroxypyruvate reductase B OS=Enteroba... [more]
FDH_EMENI1.274e-1230.32Probable formate dehydrogenase OS=Emericella nidul... [more]
YN14_YEAST2.838e-1228.40Putative 2-hydroxyacid dehydrogenase YNL274C OS=Sa... [more]
SERA_PONAB2.838e-1227.38D-3-phosphoglycerate dehydrogenase OS=Pongo abelii... [more]
FDH_HORVU2.838e-1227.93Formate dehydrogenase, mitochondrial OS=Hordeum vu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-E12-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674798 ID=EY674798; Name=EY674798; organism=Citrus sinensis; type=EST; length=1032bp
CTGCCCGCCGCCAACGCCTGGGCCTGCACTATCGTGCGGGTGCCGGCCTA
TTCGCCCCATGCGGTGGCCGAACATGCGGTCGCACTGATCCTGGCCCTCA
ATCGCCGCCTGCACCGCGCCTACAACCGTACCCGCGACGGTGACTTCAGC
CTGCATGGCCTGACCGGTTTCGACCTGGTGGGCAAGACCGTCGGCGTGGT
CGGCACCGGGCAGATCGGCGCCACATTCGCCAAGATCATGGCCGGGTTCG
GCTGCCAGTTGCTGGCGTACAATCCTTACCCCAACCCGCAGGTCGAGGCC
CTCGGTGCGCGCTATGTGAGCCTGCATGAGTTGCTGGGCGAGTCGCAGAT
CATCAGCCTGCATTGCCCGCTGACGGCGGACAGCAAACACCTGATCAACG
CCCAAAGCCTGGCCCATATGCAGCCCGGCGCGATGCTGATCAATACCGGG
CGCGGGGGCCTGGTGGACACCCCGGCGCTGATCCACGCACTCAAGGAAGG
GCCACTCGGCTATCTGGGGGCTGGATGTGTAAAAAGAAAAGCCCACCTGT
TTTTCAAAGACCGCTCCGAAATTTGCCATTGCAAAACAAACATAATGGGC
GCGCCTGGCTTGAACTTTCCCCCCAAAGGAATTATCACCGCCCCCACCAA
GCATTTCCTGAAACCCCAAGGCCCCTGGGGGGCAATATTGGCGGGCACTA
CCCCTGGCCAAAAATCCCCGGCGGTGGGGTAGGGGGGGGCTAGGGCACAA
AAACCCCCGACAAAAGGAAAAAACAACCCGGTATCCATAAAACCCCCCGC
CCAAGAAAAAGAGGGGGGGCCCCCCCGAAAATTAGGAAAGCCACCACCCC
CCATTTTTGGAAAGAATACCCCAATGGGTAAAAAAAACCCAAAATTTTTC
CCCCCCATTCAACATATTTTGGAATAAGACCCCCAACAAGAAATAAAATC
ACCCAACAGGAATATAAAAAAAATAGCGCTGCTCAGCCACACCAAATGAG
TGAGGGGCGCGTAGGGGGAGTGCACGGGCCTA
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