EY674794

Overview
NameEY674794
Unique NameEY674794
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1050
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: DHD2_LACPA (D-2-hydroxyisocaproate dehydrogenase OS=Lactobacillus paracasei PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.775e-20
Identity = 42/124 (33.87%), Postives = 63/124 (50.81%), Query Frame = 3
Query:   12 QRLGLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHG-LTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYP----NPQVEALGARYVSLHELLGESQIISLHCP 368
            ++ G+ +  VPAYSP A+AE A+   L L R + +   + + GD+   G   G +L            IG    K+  GFG +++AYDPYP    +P  +     YVSL +L  +S +I LH P
Sbjct:   88 KQYGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKGDHPDFD-----YVSLEDLFKQSDVIDLHVP 206          

HSP 2 Score: 51.2174 bits (121), Expect = 5.775e-20
Identity = 23/49 (46.94%), Postives = 33/49 (67.35%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYE 534
            H+IN  +   M+PGA++INT R  L+DT A++  LK G L  +G+D YE
Sbjct:  213 HIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYE 261          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: LDHD_PEDAC (D-lactate dehydrogenase OS=Pediococcus acidilactici GN=ldhD PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 9.770e-20
Identity = 39/120 (32.50%), Postives = 60/120 (50.00%), Query Frame = 3
Query:   24 LPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIISLHCPLTADS 383
            + I  VPAYSP A+AE +V  +LAL R++     +   GD+      G +L           +IG     I   FG +++AYD + NP +E  G    +L EL  ++ +I+LH P   D+
Sbjct:   92 IKISNVPAYSPRAIAELSVTQLLALLRKIPEFEYKMAHGDYRWEPDIGLELNQMTVGVIGTGRIGRAAIDIFKPFGAKVIAYDVFRNPALEKEGMYVDTLEELYQQANVITLHVPALKDN 211          

HSP 2 Score: 50.447 bits (119), Expect = 9.770e-20
Identity = 22/55 (40.00%), Postives = 33/55 (60.00%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAPLF 552
            H+++ ++   MQ G  ++N  RG LVDTPAL+ AL  G +    LD YE +  +F
Sbjct:  213 HMLDEKAFGQMQDGTFILNFARGTLVDTPALLKALDSGKVAGAALDTYENEVGIF 267          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: GYAR_THELI (Glyoxylate reductase OS=Thermococcus litoralis GN=gyaR PE=1 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.271e-19
Identity = 43/129 (33.33%), Postives = 60/129 (46.51%), Query Frame = 3
Query:   21 GLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSL-----HGLT--GFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEA-LGARYVSLHELLGESQIISLHCPLTADS 383
            G+ +   P     A A+ A AL+LA+ RR+  A    R G++       H L   G+ L           +IG   AK   GFG +++ Y     P+ E  +GA YV    LL ES  ISLH PLT ++
Sbjct:   90 GIYVTNTPGVLTDATADLAFALLLAVARRIVEADAFVRSGEWKKSEVGWHPLMFLGYGLKGKTLGIVGFGRIGQALAKRAKGFGMKIIYYSRTRKPEAEEEIGAEYVDFETLLKESDFISLHVPLTKET 218          

HSP 2 Score: 57.7658 bits (138), Expect = 1.271e-19
Identity = 29/64 (45.31%), Postives = 43/64 (67.19%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAPLFFQRTLRIAN 579
            H+I  + L  M+P A+LINT RG +VDT ALI ALK+G +   GLDV+E++ P + +   ++ N
Sbjct:  220 HMIGEKELKLMKPNAILINTSRGAVVDTNALIKALKEGWIAGAGLDVFEEE-PYYNEELFKLKN 282          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: LDHD_LEUMC (D-lactate dehydrogenase OS=Leuconostoc mesenteroides subsp. cremoris PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 2.795e-19
Identity = 37/113 (32.74%), Postives = 56/113 (49.56%), Query Frame = 3
Query:   30 IVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIISLHCP 368
            I  VP YSP+A+AEH++  +  L RR      +    D      TG ++            IG     I+ GFG +++AYD YPN +++A G    +L EL  ++  ISL+ P
Sbjct:   95 ISNVPVYSPNAIAEHSMLQLSRLLRRTKALDAKIAKRDLRWAPTTGREMRMQTVGVIGTGHIGRVAINILKGFGAKVIAYDKYPNAELQAEGLYVDTLDELYAQADAISLYVP 207          

HSP 2 Score: 51.2174 bits (121), Expect = 2.795e-19
Identity = 22/51 (43.14%), Postives = 33/51 (64.71%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKK 540
            HLINA ++A M+ G +++N  RG L+D  A+I  L  G +   G+DVYE +
Sbjct:  214 HLINADAIAKMKDGVVIMNAARGNLMDIDAIIDGLNSGKISDFGMDVYENE 264          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: SERA_METTH (D-3-phosphoglycerate dehydrogenase OS=Methanobacterium thermoautotrophicum GN=serA PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.679e-19
Identity = 35/123 (28.46%), Postives = 62/123 (50.41%), Query Frame = 3
Query:   21 GLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQ-VEALGARYVSLHELLGESQIISLHCPLTADSK 386
            G+ ++  P  +   VAEH++ L+LAL R++  A    ++G +  +   G +L           +IG+        FG  ++ YDPY + +  E +G     L  LL ES I+++H PLT +++
Sbjct:   88 GIMVINAPESTSITVAEHSIGLMLALARKIAIADRSVKEGKWEKNRFMGIELNGKTLGIIGMGRIGSQVVVRTKAFGMDIMVYDPYISKEAAEEMGVTVTDLETLLRESDIVTIHVPLTPETR 210          

HSP 2 Score: 49.6766 bits (117), Expect = 4.679e-19
Identity = 22/54 (40.74%), Postives = 33/54 (61.11%), Query Frame = 1
Query:  385 KHLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAP 546
            +HLI+      M+  A ++N  RGG++D  AL  ALKDG +    LDV+E++ P
Sbjct:  210 RHLISEDEFKLMKDTAFIVNCARGGIIDEDALYRALKDGEIAGAALDVFEEEPP 263          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: LDHD_STAAN (D-lactate dehydrogenase OS=Staphylococcus aureus (strain N315) GN=ldhD PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.149e-19
Identity = 42/119 (35.29%), Postives = 62/119 (52.10%), Query Frame = 3
Query:   30 IVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHG-LTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIISLHCPLTADS 383
            I  VP+YSP  +AE++V++ L L RR      R +  DF+    +    +           +IGA  AKI AGFG  + AYD YPN  ++ L  +  S+ E + ++ IISLH P   +S
Sbjct:   95 ISNVPSYSPETIAEYSVSIALQLVRRFPDIERRVQTHDFTWQAEIMSKPVKNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYK-DSVKEAIKDADIISLHVPANKES 212          

HSP 2 Score: 48.1358 bits (113), Expect = 6.149e-19
Identity = 22/55 (40.00%), Postives = 33/55 (60.00%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAPLF 552
            HL +     H++ GA+L+N  RG +++TP LI A+ DG L    +D YE +A  F
Sbjct:  214 HLFDKAMFDHVKKGAILVNAARGAVINTPDLIAAVNDGTLLGAAIDTYENEAAYF 268          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: LDHD_STAAM (D-lactate dehydrogenase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=ldhD PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.149e-19
Identity = 42/119 (35.29%), Postives = 62/119 (52.10%), Query Frame = 3
Query:   30 IVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHG-LTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIISLHCPLTADS 383
            I  VP+YSP  +AE++V++ L L RR      R +  DF+    +    +           +IGA  AKI AGFG  + AYD YPN  ++ L  +  S+ E + ++ IISLH P   +S
Sbjct:   95 ISNVPSYSPETIAEYSVSIALQLVRRFPDIERRVQTHDFTWQAEIMSKPVKNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYK-DSVKEAIKDADIISLHVPANKES 212          

HSP 2 Score: 48.1358 bits (113), Expect = 6.149e-19
Identity = 22/55 (40.00%), Postives = 33/55 (60.00%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAPLF 552
            HL +     H++ GA+L+N  RG +++TP LI A+ DG L    +D YE +A  F
Sbjct:  214 HLFDKAMFDHVKKGAILVNAARGAVINTPDLIAAVNDGTLLGAAIDTYENEAAYF 268          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: LDHD_STAAR (D-lactate dehydrogenase OS=Staphylococcus aureus (strain MRSA252) GN=ldhD PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.149e-19
Identity = 42/119 (35.29%), Postives = 62/119 (52.10%), Query Frame = 3
Query:   30 IVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHG-LTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIISLHCPLTADS 383
            I  VP+YSP  +AE++V++ L L RR      R +  DF+    +    +           +IGA  AKI AGFG  + AYD YPN  ++ L  +  S+ E + ++ IISLH P   +S
Sbjct:   95 ISNVPSYSPETIAEYSVSIALQLVRRFPDIERRVQAHDFTWQAEIMSKPVKNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYK-DSVKEAIKDADIISLHVPANKES 212          

HSP 2 Score: 48.521 bits (114), Expect = 6.149e-19
Identity = 22/55 (40.00%), Postives = 33/55 (60.00%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAPLF 552
            HL +     H++ GA+L+N  RG +++TP LI A+ DG L    +D YE +A  F
Sbjct:  214 HLFDKTMFDHVKKGAILVNAARGAVINTPDLIDAVNDGTLLGAAIDTYENEAAYF 268          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: LDHD_STRA5 (D-lactate dehydrogenase OS=Streptococcus agalactiae serotype V GN=ldhD PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.996e-19
Identity = 41/122 (33.61%), Postives = 64/122 (52.46%), Query Frame = 3
Query:   21 GLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLH-GLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIISLHCPLTADS 383
            G+ I  VP+YSP ++AE  V + L L R++       R+ +FS    + G  L           +IG   AKI  GFGC+++ YD Y NP  + +     S+ E + E+ ++SLH P TA++
Sbjct:   91 GIIISNVPSYSPESIAEFTVTIALNLIRKVELIRANVREQNFSWTLPIRGRVLGNMTVAIIGTGRIGLATAKIFKGFGCRVIGYDIYHNPMADGILEYVNSVEEAVEEADLVSLHMPPTAEN 212          

HSP 2 Score: 44.669 bits (104), Expect = 7.996e-19
Identity = 22/53 (41.51%), Postives = 29/53 (54.72%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAP 546
            HL N       + GA+L+N  RG LV+T  L+ AL  G L   G+D YE + P
Sbjct:  214 HLFNLDMFKQFKKGAILMNMARGALVETKDLLEALDQGLLEGAGIDTYEFEGP 266          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: LDHD_STAAW (D-lactate dehydrogenase OS=Staphylococcus aureus (strain MW2) GN=ldhD PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 7.996e-19
Identity = 42/119 (35.29%), Postives = 62/119 (52.10%), Query Frame = 3
Query:   30 IVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHG-LTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIISLHCPLTADS 383
            I  VP+YSP  +AE++V++ L L RR      R +  DF+    +    +           +IGA  AKI AGFG  + AYD YPN  ++ L  +  S+ E + ++ IISLH P   +S
Sbjct:   95 ISNVPSYSPETIAEYSVSIALQLVRRFPDIERRVQAHDFTWQAEIMSKPVKNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYK-DSVKEAIKDADIISLHVPANKES 212          

HSP 2 Score: 48.1358 bits (113), Expect = 7.996e-19
Identity = 22/55 (40.00%), Postives = 33/55 (60.00%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAPLF 552
            HL +     H++ GA+L+N  RG +++TP LI A+ DG L    +D YE +A  F
Sbjct:  214 HLFDKAMFDHVKKGAILVNAARGAVINTPDLIAAVNDGTLLGAAIDTYENEAAYF 268          
The following BLAST results are available for this feature:
BLAST of EY674794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
DHD2_LACPA5.775e-2033.87D-2-hydroxyisocaproate dehydrogenase OS=Lactobacil... [more]
LDHD_PEDAC9.770e-2032.50D-lactate dehydrogenase OS=Pediococcus acidilactic... [more]
GYAR_THELI1.271e-1933.33Glyoxylate reductase OS=Thermococcus litoralis GN=... [more]
LDHD_LEUMC2.795e-1932.74D-lactate dehydrogenase OS=Leuconostoc mesenteroid... [more]
SERA_METTH4.679e-1928.46D-3-phosphoglycerate dehydrogenase OS=Methanobacte... [more]
LDHD_STAAN6.149e-1935.29D-lactate dehydrogenase OS=Staphylococcus aureus (... [more]
LDHD_STAAM6.149e-1935.29D-lactate dehydrogenase OS=Staphylococcus aureus (... [more]
LDHD_STAAR6.149e-1935.29D-lactate dehydrogenase OS=Staphylococcus aureus (... [more]
LDHD_STRA57.996e-1933.61D-lactate dehydrogenase OS=Streptococcus agalactia... [more]
LDHD_STAAW7.996e-1935.29D-lactate dehydrogenase OS=Staphylococcus aureus (... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-E07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674794 ID=EY674794; Name=EY674794; organism=Citrus sinensis; type=EST; length=1050bp
CTGCCCGCCGCCAACGCCTGGGCCTCCCTATCGTGCGGGTGCCGGCCTAT
TCGCCCCATGCGGTGGCCGAACATGCGGTCGCACTGATCCTGGCCCTCAA
TCGCCGCCTGCACCGCGCCTACAACCGTACCCGCGACGGTGACTTCAGCC
TGCATGGCCTGACCGGTTTCGACCTGGTGGGCAAGACCGTCGGCGTGGTC
GGCACCGGGCAGATCGGCGCCACATTCGCCAAGATCATGGCCGGGTTCGG
CTGCCAGTTGCTGGCGTACGATCCTTACCCCAACCCGCAGGTCGAGGCCC
TCGGTGCGCGCTATGTGAGCCTGCATGAGTTGCTGGGCGAGTCGCAGATC
ATCAGCCTGCATTGCCCGCTGACGGCGGACAGCAAAACACCTGATCAACG
CCCAAAGCCTGGCCCATATGCAGCCCGGCGCGATGCTGATCAATACCGGG
CGCGGGGGCCTGGTGGACACCCCGGCGCTGATTCACGCACTCAAGGACGG
CCACCTCGGCTATCTGGGGCTGGATGTGTATGAAAAAAAAGCCCCACTGT
TTTTTCAAAGAACGCTCCGAATTGCCAATGCAAAAAGAAATTATTGGGCC
GCGCCTGGCTGACCTTCCCCCCACTGGATTATCACCGGCCCACCAAGGCT
TTTCTGGACCCGCTAAAGCCCTTGTGGGGGCAATTGCCGGTAAAAAACCC
TTGGCTCAAATTCCAGGTCTGTGGGATTGGGGGGGATAGGCAACAAAACT
CCCTTTAAAAAGAGATATTTAAGTGGATCAAAAATACCCCACGCCCATTG
AAAGAGGGGGGGGGCCCTGAGAAAAAAAAAAAACCACACCACCAAATAAT
AAGAAGAAAAACAGAGGGACAAAAAAAAACAATATTCCCCATTTTATAAA
TTTTGCGAGAAACCCCAAAACAAAAACCCCCTCCATTTATAATAATGGAG
CCCACGCCCCACCATGGGAGCGGCGGAGGGGCCCTATTTTGACACAAAAA
CTGCAACACCAAGGAACAGCACAGTGAGGTGGGGTGGAACCCCTTATCGA
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