EY674794

Overview
NameEY674794
Unique NameEY674794
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1050
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: LDHD_STAAU (D-lactate dehydrogenase OS=Staphylococcus aureus GN=ldhD PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.996e-19
Identity = 42/119 (35.29%), Postives = 62/119 (52.10%), Query Frame = 3
Query:   30 IVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHG-LTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIISLHCPLTADS 383
            I  VP+YSP  +AE++V++ L L RR      R +  DF+    +    +           +IGA  AKI AGFG  + AYD YPN  ++ L  +  S+ E + ++ IISLH P   +S
Sbjct:   95 ISNVPSYSPETIAEYSVSIALQLVRRFPDIERRVQAHDFTWQAEIMSKPVKNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYK-DSVKEAIKDADIISLHVPANKES 212          

HSP 2 Score: 48.1358 bits (113), Expect = 7.996e-19
Identity = 22/55 (40.00%), Postives = 33/55 (60.00%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAPLF 552
            HL +     H++ GA+L+N  RG +++TP LI A+ DG L    +D YE +A  F
Sbjct:  214 HLFDKAMFDHVKKGAILVNAARGAVINTPDLIAAVNDGTLLGAAIDTYENEAAYF 268          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: LDHD_STAAS (D-lactate dehydrogenase OS=Staphylococcus aureus (strain MSSA476) GN=ldhD PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.996e-19
Identity = 42/119 (35.29%), Postives = 62/119 (52.10%), Query Frame = 3
Query:   30 IVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHG-LTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIISLHCPLTADS 383
            I  VP+YSP  +AE++V++ L L RR      R +  DF+    +    +           +IGA  AKI AGFG  + AYD YPN  ++ L  +  S+ E + ++ IISLH P   +S
Sbjct:   95 ISNVPSYSPETIAEYSVSIALQLVRRFPDIERRVQAHDFTWQAEIMSKPVKNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYK-DSVKEAIKDADIISLHVPANKES 212          

HSP 2 Score: 48.1358 bits (113), Expect = 7.996e-19
Identity = 22/55 (40.00%), Postives = 33/55 (60.00%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAPLF 552
            HL +     H++ GA+L+N  RG +++TP LI A+ DG L    +D YE +A  F
Sbjct:  214 HLFDKAMFDHVKKGAILVNAARGAVINTPDLIAAVNDGTLLGAAIDTYENEAAYF 268          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: LDHD_STAAC (D-lactate dehydrogenase OS=Staphylococcus aureus (strain COL) GN=ldhD PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.996e-19
Identity = 42/119 (35.29%), Postives = 62/119 (52.10%), Query Frame = 3
Query:   30 IVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHG-LTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIISLHCPLTADS 383
            I  VP+YSP  +AE++V++ L L RR      R +  DF+    +    +           +IGA  AKI AGFG  + AYD YPN  ++ L  +  S+ E + ++ IISLH P   +S
Sbjct:   95 ISNVPSYSPETIAEYSVSIALQLVRRFPDIERRVQAHDFTWQAEIMSKPVKNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYK-DSVKEAIKDADIISLHVPANKES 212          

HSP 2 Score: 48.1358 bits (113), Expect = 7.996e-19
Identity = 22/55 (40.00%), Postives = 33/55 (60.00%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAPLF 552
            HL +     H++ GA+L+N  RG +++TP LI A+ DG L    +D YE +A  F
Sbjct:  214 HLFDKAMFDHVKKGAILVNAARGAVINTPDLIAAVNDGTLLGAAIDTYENEAAYF 268          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: VANH_ENTFC (D-specific alpha-keto acid dehydrogenase OS=Enterococcus faecium GN=vanH PE=1 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.759e-18
Identity = 40/124 (32.26%), Postives = 59/124 (47.58%), Query Frame = 3
Query:   12 QRLGLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIISLHCPLTADS 383
            +R+G+ +  V AYSP +VA++ + LIL   R +          DF L    G  L           QIG    + + GFGC++LAY      +  ++   YV   ELL  S I++LH PL  D+
Sbjct:   91 KRMGITVDNV-AYSPDSVADYTMMLILMAVRNVKSIVRSVEKHDFRLDSDRGKVLSDMTVGVVGTGQIGKAVIERLRGFGCKVLAYS-----RSRSIEVNYVPFDELLQNSDIVTLHVPLNTDT 208          

HSP 2 Score: 52.7582 bits (125), Expect = 1.759e-18
Identity = 26/56 (46.43%), Postives = 37/56 (66.07%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAPLFF 555
            ++I+ + +  M+ GA LINTGRG LVDT  L+ AL++G LG   LDV E +   F+
Sbjct:  210 YIISHEQIQRMKQGAFLINTGRGPLVDTYELVKALENGKLGGAALDVLEGEEEFFY 265          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: LDHD_STRA3 (D-lactate dehydrogenase OS=Streptococcus agalactiae serotype III GN=ldhD PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.286e-18
Identity = 40/122 (32.79%), Postives = 64/122 (52.46%), Query Frame = 3
Query:   21 GLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLH-GLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIISLHCPLTADS 383
            G+ I  VP+YSP ++AE  V + L L R++       R+ +FS    + G  L           +IG   AKI  GFGC+++ YD Y NP  + +     S+ E + ++ ++SLH P TA++
Sbjct:   91 GIIISNVPSYSPESIAEFTVTIALNLIRKVELIRANVREQNFSWTLPIRGRVLGNMTVAIIGTGRIGLATAKIFKGFGCRVIGYDIYHNPMADGILEYVNSVEEAVEKADLVSLHMPPTAEN 212          

HSP 2 Score: 44.669 bits (104), Expect = 2.286e-18
Identity = 22/53 (41.51%), Postives = 29/53 (54.72%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAP 546
            HL N       + GA+L+N  RG LV+T  L+ AL  G L   G+D YE + P
Sbjct:  214 HLFNLDMFKQFKKGAILMNMARGALVETKDLLEALDQGLLEGAGIDTYEFEGP 266          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: DHGY_METEA (Glycerate dehydrogenase OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=hprA PE=1 SV=3)

HSP 1 Score: 56.9954 bits (136), Expect = 5.033e-18
Identity = 28/54 (51.85%), Postives = 37/54 (68.52%), Query Frame = 1
Query:  385 KHLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAP 546
            K++I A+ L  M+  A+LINT RGGLVD  AL+ ALKDG +G  G DV  ++ P
Sbjct:  208 KNMIGAEQLKKMKRSAILINTARGGLVDEAALLQALKDGTIGGAGFDVVAQEPP 261          

HSP 2 Score: 55.8398 bits (133), Expect = 5.033e-18
Identity = 37/128 (28.91%), Postives = 58/128 (45.31%), Query Frame = 3
Query:   21 GLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGD------FSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIISLHCPLTADSK 386
            G+ +V +  Y+ + V EH V L+ AL R +    N  R GD      F       +D+            +G + AK     G ++LA+D +P   +       V L  +L +S +I+LH PLT D+K
Sbjct:   88 GITVVNIRNYAFNTVPEHVVGLMFALRRAIVPYANSVRRGDWNKSKQFCYFDYPIYDIAGSTLGIIGYGALGKSIAKRAEALGMKVLAFDVFPQDGL-------VDLETILTQSDVITLHVPLTPDTK 208          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: GYAR_PYRKO (Glyoxylate reductase OS=Pyrococcus kodakaraensis GN=gyaR PE=3 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 8.495e-18
Identity = 42/132 (31.82%), Postives = 63/132 (47.73%), Query Frame = 3
Query:   15 RLGLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLT-------GFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEA-LGARYVSLHELLGESQIISLHCPLTADSK 386
            R G+ +   P     A A+ A  L+LA  RRL  A + TR G++   G+        G+D+           +IG   A+   GFG ++L Y     P+ E  LGA + SL +LL ES  + L  PLT +++
Sbjct:   88 RRGIYVTNTPDVLTDATADFAWTLLLATARRLIEADHFTRSGEWKRRGIAWHPRWFLGYDVYGKTIGIVGFGRIGQAVARRARGFGMRILYYSRSRKPEAEKELGAEFRSLEDLLRESDFVVLAVPLTKETQ 219          

HSP 2 Score: 50.447 bits (119), Expect = 8.495e-18
Identity = 26/65 (40.00%), Postives = 42/65 (64.62%), Query Frame = 1
Query:  385 KHLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAPLFFQRTLRIAN 579
            +++IN + L  M+  A+L+N  RG +VDT AL+ ALK+G +   GLDVYE++ P + +    + N
Sbjct:  219 QYMINEERLRLMKKTAILVNIARGKVVDTKALMKALKEGWIAGAGLDVYEEE-PYYNEELFSLKN 282          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: GYAR_THEON (Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1) GN=gyaR PE=3 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 1.104e-17
Identity = 41/131 (31.30%), Postives = 62/131 (47.33%), Query Frame = 3
Query:   15 RLGLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLT-------GFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEA-LGARYVSLHELLGESQIISLHCPLTADS 383
            ++G+ I   P    +A A+ A  L+LA  RRL  A    R G++   G+        G+D+           +IG   A+   GFG ++L       P+VE  LGA ++ L ELL ES  + L  PLT ++
Sbjct:   88 KMGVYITNTPDVLTNATADMAWVLLLATARRLIEADKFVRSGEWKKRGVAWHPLMFLGYDVYGRTIGIVGFGRIGQAIARRAKGFGMRILYNSRTRKPEVEKELGAEFMPLDELLKESDFVVLVVPLTKET 218          

HSP 2 Score: 53.9138 bits (128), Expect = 1.104e-17
Identity = 26/64 (40.62%), Postives = 42/64 (65.62%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAPLFFQRTLRIAN 579
            H+IN + L  M+P A+L+N  RG +VDT AL+ AL++G +   GLDV+E++ P + +    + N
Sbjct:  220 HMINEERLKLMKPTAILVNIARGKVVDTEALVKALREGWIAGAGLDVFEEE-PYYHEELFSLDN 282          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: GYAR_KORCO (Glyoxylate reductase OS=Korarchaeum cryptofilum (strain OPF8) GN=gyaR PE=3 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.105e-17
Identity = 40/126 (31.75%), Postives = 60/126 (47.62%), Query Frame = 3
Query:   21 GLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHG----LTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEA-LGARYVSLHELLGESQIISLHCPLTADS 383
            G+ +   P       A+ A AL++A  RR+  A    R+G + +      + G+D+           +IGA  A+   GFG ++L YD       E  LG  YV L +LL ES  +SLH PLT ++
Sbjct:   90 GIYVTNTPGVLTETTADFAFALLMAAARRVVEADRYVREGKWKVAWHPMMMLGYDVYGRTLGIVGMGRIGAAVARRAKGFGMRILYYDSIRREDFEKELGVEYVPLEKLLEESDFVSLHVPLTEET 215          

HSP 2 Score: 48.521 bits (114), Expect = 1.105e-17
Identity = 23/51 (45.10%), Postives = 34/51 (66.67%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKK 540
            H+I  + L  M+  A+L+NT RG +VD  AL  ALK+G +   GLDV+E++
Sbjct:  217 HMIGEEQLRRMKRTAILVNTSRGKVVDQKALYKALKEGWIAGAGLDVFEQE 267          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: GYAR_AERPE (Glyoxylate reductase OS=Aeropyrum pernix GN=gyaR PE=3 SV=2)

HSP 1 Score: 58.5362 bits (140), Expect = 1.867e-17
Identity = 43/132 (32.58%), Postives = 66/132 (50.00%), Query Frame = 3
Query:   15 RLGLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDF-----SLHGLT--GFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEA-LGARYVSLHELLGESQIISLHCPLTADSK 386
            RLG+ +   P     A AE   ALILA  RR+  A +  R G++       H +   G +L           +IG+  A+I   FG +++ +      ++E  LGA Y SL +LL ES I+S+H PLT +++
Sbjct:   89 RLGIYVTNTPGVLTEATAEFTWALILAAARRVVEADHFVRWGEWWRLRTGWHPMMMLGVELRGKTLGILGMGRIGSRVAEIGKAFGMRIIYHSRSRKREIEKELGAEYRSLEDLLRESDILSIHLPLTDETR 220          

HSP 2 Score: 52.373 bits (124), Expect = 1.867e-17
Identity = 24/52 (46.15%), Postives = 36/52 (69.23%), Query Frame = 1
Query:  385 KHLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKK 540
            +HLI    L  M+  A+L+NTGRG +VDT AL+ AL++G +    LDV+E++
Sbjct:  220 RHLIGESELKLMKKTAILVNTGRGAIVDTGALVKALREGWIAAAALDVFEEE 271          
The following BLAST results are available for this feature:
BLAST of EY674794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
LDHD_STAAU7.996e-1935.29D-lactate dehydrogenase OS=Staphylococcus aureus G... [more]
LDHD_STAAS7.996e-1935.29D-lactate dehydrogenase OS=Staphylococcus aureus (... [more]
LDHD_STAAC7.996e-1935.29D-lactate dehydrogenase OS=Staphylococcus aureus (... [more]
VANH_ENTFC1.759e-1832.26D-specific alpha-keto acid dehydrogenase OS=Entero... [more]
LDHD_STRA32.286e-1832.79D-lactate dehydrogenase OS=Streptococcus agalactia... [more]
DHGY_METEA5.033e-1851.85Glycerate dehydrogenase OS=Methylobacterium extorq... [more]
GYAR_PYRKO8.495e-1831.82Glyoxylate reductase OS=Pyrococcus kodakaraensis G... [more]
GYAR_THEON1.104e-1731.30Glyoxylate reductase OS=Thermococcus onnurineus (s... [more]
GYAR_KORCO1.105e-1731.75Glyoxylate reductase OS=Korarchaeum cryptofilum (s... [more]
GYAR_AERPE1.867e-1732.58Glyoxylate reductase OS=Aeropyrum pernix GN=gyaR P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-E07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674794 ID=EY674794; Name=EY674794; organism=Citrus sinensis; type=EST; length=1050bp
CTGCCCGCCGCCAACGCCTGGGCCTCCCTATCGTGCGGGTGCCGGCCTAT
TCGCCCCATGCGGTGGCCGAACATGCGGTCGCACTGATCCTGGCCCTCAA
TCGCCGCCTGCACCGCGCCTACAACCGTACCCGCGACGGTGACTTCAGCC
TGCATGGCCTGACCGGTTTCGACCTGGTGGGCAAGACCGTCGGCGTGGTC
GGCACCGGGCAGATCGGCGCCACATTCGCCAAGATCATGGCCGGGTTCGG
CTGCCAGTTGCTGGCGTACGATCCTTACCCCAACCCGCAGGTCGAGGCCC
TCGGTGCGCGCTATGTGAGCCTGCATGAGTTGCTGGGCGAGTCGCAGATC
ATCAGCCTGCATTGCCCGCTGACGGCGGACAGCAAAACACCTGATCAACG
CCCAAAGCCTGGCCCATATGCAGCCCGGCGCGATGCTGATCAATACCGGG
CGCGGGGGCCTGGTGGACACCCCGGCGCTGATTCACGCACTCAAGGACGG
CCACCTCGGCTATCTGGGGCTGGATGTGTATGAAAAAAAAGCCCCACTGT
TTTTTCAAAGAACGCTCCGAATTGCCAATGCAAAAAGAAATTATTGGGCC
GCGCCTGGCTGACCTTCCCCCCACTGGATTATCACCGGCCCACCAAGGCT
TTTCTGGACCCGCTAAAGCCCTTGTGGGGGCAATTGCCGGTAAAAAACCC
TTGGCTCAAATTCCAGGTCTGTGGGATTGGGGGGGATAGGCAACAAAACT
CCCTTTAAAAAGAGATATTTAAGTGGATCAAAAATACCCCACGCCCATTG
AAAGAGGGGGGGGGCCCTGAGAAAAAAAAAAAACCACACCACCAAATAAT
AAGAAGAAAAACAGAGGGACAAAAAAAAACAATATTCCCCATTTTATAAA
TTTTGCGAGAAACCCCAAAACAAAAACCCCCTCCATTTATAATAATGGAG
CCCACGCCCCACCATGGGAGCGGCGGAGGGGCCCTATTTTGACACAAAAA
CTGCAACACCAAGGAACAGCACAGTGAGGTGGGGTGGAACCCCTTATCGA
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