EY674794

Overview
NameEY674794
Unique NameEY674794
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1050
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: LDHD_LACPE (D-lactate dehydrogenase OS=Lactobacillus pentosus PE=1 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 5.651e-16
Identity = 38/121 (31.40%), Postives = 58/121 (47.93%), Query Frame = 3
Query:   21 GLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIISLHCPLTADS 383
            GL I  VPAYSP+A+AE +V  ++ L R+      +    DF        +L           +IG     I  GFG +++ YD Y N ++E  G    +L EL  ++ +I+LH P   D+
Sbjct:   92 GLNISNVPAYSPNAIAELSVTQLMQLLRQTPMFNKKLAKQDFRWAPDIAKELNTMTVGVIGTGRIGRAAIDIFKGFGAKVIGYDVYRNAELEKEGMYVDTLDELYAQADVITLHVPALKDN 212          

HSP 2 Score: 43.1282 bits (100), Expect = 5.651e-16
Identity = 20/55 (36.36%), Postives = 32/55 (58.18%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAPLF 552
            H++NA + + M+ GA ++N  RG L+D+  LI AL  G +    L  YE +  +F
Sbjct:  214 HMLNADAFSKMKDGAYILNFARGTLIDSEDLIKALDSGKVAGAALVTYEYETKIF 268          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: LDHD_STRP1 (D-lactate dehydrogenase OS=Streptococcus pyogenes serotype M1 GN=ldhD PE=3 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 1.241e-15
Identity = 36/119 (30.25%), Postives = 61/119 (51.26%), Query Frame = 3
Query:   30 IVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLH-GLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIISLHCPLTADS 383
            I  VP+YSP ++AE  V ++L L R +       +  +F+    + G  L           +IG   AKI  GFGC+++ YD Y +   +A+     S+ E + ++ ++SLH P TA++
Sbjct:   94 ITNVPSYSPESIAEFTVTIVLNLIRHVELIRENVKKQNFTWGLPIRGRVLGDMTVAIIGTGRIGLATAKIFKGFGCKVVGYDIYQSDAAKAVLDYKESVEEAIKDADLVSLHMPPTAEN 212          

HSP 2 Score: 42.743 bits (99), Expect = 1.241e-15
Identity = 20/53 (37.74%), Postives = 30/53 (56.60%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAP 546
            HL N+      + GA+L+N  RG +++T  L+ AL  G L   G+D YE + P
Sbjct:  214 HLFNSDLFKSFKKGAILMNMARGAVIETQDLLDALDAGLLSGAGIDTYEFEGP 266          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: SERA_ARATH (D-3-phosphoglycerate dehydrogenase, chloroplastic OS=Arabidopsis thaliana GN=At1g17745 PE=1 SV=2)

HSP 1 Score: 58.9214 bits (141), Expect = 5.878e-15
Identity = 34/123 (27.64%), Postives = 57/123 (46.34%), Query Frame = 3
Query:   21 GLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPY-PNPQVEALGARYVSLHELLGESQIISLHCPLTADSK 386
            G  +V  P  +  A AEH +AL+ ++ R + +A    + G +      G  L           ++G   A+   G G  ++++DPY P  +  ALG   VS  + +  +  +SLH PLT  +K
Sbjct:  168 GCLVVNAPTANTVAAAEHGIALLASMARNVAQADASIKAGKWERSKYVGVSLVGKTLAVMGFGKVGTEVARRAKGLGMTVISHDPYAPADRARALGVDLVSFDQAISTADFVSLHMPLTPATK 290          

HSP 2 Score: 43.5134 bits (101), Expect = 5.878e-15
Identity = 22/65 (33.85%), Postives = 36/65 (55.38%), Query Frame = 1
Query:  385 KHLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAPLFFQRTLRIAN 579
            K + N ++ + M+ G  LIN  RGG++D  AL+ AL  G +    LDV+ ++ P    R ++  N
Sbjct:  290 KKVFNDETFSKMKKGVRLINVARGGVIDEDALVRALDAGIVAQAALDVFCEEPPSKDSRLIQHEN 354          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: SERA_BACSU (D-3-phosphoglycerate dehydrogenase OS=Bacillus subtilis GN=serA PE=3 SV=3)

HSP 1 Score: 52.373 bits (124), Expect = 7.670e-15
Identity = 23/55 (41.82%), Postives = 37/55 (67.27%), Query Frame = 1
Query:  385 KHLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAPL 549
            K L+N +++A  + G  LIN  RGG++D  AL+ AL++GH+    LDV+E + P+
Sbjct:  207 KGLLNKETIAKTKKGVRLINCARGGIIDEAALLEALENGHVAGAALDVFEVEPPV 261          

HSP 2 Score: 49.6766 bits (117), Expect = 7.670e-15
Identity = 29/123 (23.58%), Postives = 59/123 (47.97%), Query Frame = 3
Query:   21 GLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPY-PNPQVEALGARYVSLHELLGESQIISLHCPLTADSK 386
            G+ ++  P  +  + AEH  A+I +L R + +A    +  +++     G +L           +IG+  A+    FG  +  +DP+    + + +G    +  E+L  + II++H PLT ++K
Sbjct:   85 GVIVINAPNGNTISTAEHTFAMISSLMRHIPQANISVKSREWNRTAYVGSELYGKTLGIVGLGRIGSEIAQRARAFGMTVHVFDPFLTEERAKKIGVNSRTFEEVLESADIITVHTPLTKETK 207          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: GYAR_PYRHO (Glyoxylate reductase OS=Pyrococcus horikoshii GN=gyaR PE=1 SV=2)

HSP 1 Score: 53.1434 bits (126), Expect = 7.763e-15
Identity = 28/64 (43.75%), Postives = 42/64 (65.62%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAPLFFQRTLRIAN 579
            HLIN + L  M+  A+LIN  RG +VDT AL+ ALK+G +   GLDV+E++ P + +   ++ N
Sbjct:  220 HLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEE-PYYNEELFKLDN 282          

HSP 2 Score: 48.9062 bits (115), Expect = 7.763e-15
Identity = 36/129 (27.91%), Postives = 56/129 (43.41%), Query Frame = 3
Query:   21 GLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLT-------GFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVE-ALGARYVSLHELLGESQIISLHCPLTADS 383
            G+ +   P     A A+ A AL+LA  R + +     R G++   G+        G+D+           +IG   AK   GF  ++L Y      +VE  L A +  L +LL ES  + L  PLT ++
Sbjct:   90 GIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKEEVERELNAEFKPLEDLLRESDFVVLAVPLTRET 218          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: Y1556_HAEIN (Putative 2-hydroxyacid dehydrogenase HI1556 OS=Haemophilus influenzae GN=HI1556 PE=1 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 6.317e-14
Identity = 32/54 (59.26%), Postives = 39/54 (72.22%), Query Frame = 1
Query:  385 KHLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAP 546
            K LINA++L+ M+ GA LINTGRG L+D  AL+ ALK GHLG   LDV  K+ P
Sbjct:  211 KDLINAETLSKMKKGAFLINTGRGPLIDELALVDALKTGHLGGAALDVMVKEPP 264          

HSP 2 Score: 35.8094 bits (81), Expect = 6.317e-14
Identity = 30/131 (22.90%), Postives = 50/131 (38.17%), Query Frame = 3
Query:   12 QRLGLPIVRVPAYSPHAVAEHAVALILALNRRL------HRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIISLHCPLTADSK 386
            + +G+ +  V  YS   V EH + LI +L   L                 F        D+            +G    ++    G ++L Y  + +  V   G  Y    E+L ++ I++LHCPLT  +K
Sbjct:   84 EEMGIAVRNVTGYSSTTVPEHVIGLIFSLKHSLAGWLRDQTEAKWAESKQFCYFDYPITDVRGSTLGVFGKGCLGTEVGRLANAVGMKVL-YAEHKDATVCREG--YTPFDEVLKQADIVTLHCPLTETTK 211          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: CTBP1_HUMAN (C-terminal-binding protein 1 OS=Homo sapiens GN=CTBP1 PE=1 SV=2)

HSP 1 Score: 55.4546 bits (132), Expect = 1.371e-13
Identity = 30/63 (47.62%), Postives = 39/63 (61.90%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAPLFFQRTLRIA 576
            HLIN  ++  M+ GA L+NT RGGLVD  AL  ALK+G +    LDV+E +   F Q  L+ A
Sbjct:  245 HLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDA 307          

HSP 2 Score: 42.3578 bits (98), Expect = 1.371e-13
Identity = 39/127 (30.71%), Postives = 56/127 (44.09%), Query Frame = 3
Query:   18 LGLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDF--SLHGLT-----GFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVE-ALGARYVS-LHELLGESQIISLHCPL 371
            LG+ +  VPA S    A+  +  IL L RR    +   R+G    S+  +         +           ++G   A     FG  +L YDPY +  VE ALG + VS L +LL  S  ++LHC L
Sbjct:  113 LGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGL 239          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: CTBP1_MOUSE (C-terminal-binding protein 1 OS=Mus musculus GN=Ctbp1 PE=1 SV=2)

HSP 1 Score: 55.4546 bits (132), Expect = 1.781e-13
Identity = 30/63 (47.62%), Postives = 39/63 (61.90%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAPLFFQRTLRIA 576
            HLIN  ++  M+ GA L+NT RGGLVD  AL  ALK+G +    LDV+E +   F Q  L+ A
Sbjct:  245 HLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDA 307          

HSP 2 Score: 41.9726 bits (97), Expect = 1.781e-13
Identity = 38/127 (29.92%), Postives = 56/127 (44.09%), Query Frame = 3
Query:   18 LGLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDF--SLHGLT-----GFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVE-ALGARYVS-LHELLGESQIISLHCPL 371
            LG+ +  VPA S    A+  +  IL L RR    +   R+G    S+  +         +           ++G   A     FG  +L YDPY +  +E ALG + VS L +LL  S  ++LHC L
Sbjct:  113 LGIAVCNVPAASVEETADSTLCHILNLYRRTTWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGIERALGLQRVSTLQDLLFHSDCVTLHCGL 239          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: CTBP1_RAT (C-terminal-binding protein 1 OS=Rattus norvegicus GN=Ctbp1 PE=1 SV=3)

HSP 1 Score: 55.4546 bits (132), Expect = 1.782e-13
Identity = 30/63 (47.62%), Postives = 39/63 (61.90%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAPLFFQRTLRIA 576
            HLIN  ++  M+ GA L+NT RGGLVD  AL  ALK+G +    LDV+E +   F Q  L+ A
Sbjct:  234 HLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDA 296          

HSP 2 Score: 41.9726 bits (97), Expect = 1.782e-13
Identity = 38/127 (29.92%), Postives = 56/127 (44.09%), Query Frame = 3
Query:   18 LGLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDF--SLHGLT-----GFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVE-ALGARYVS-LHELLGESQIISLHCPL 371
            LG+ +  VPA S    A+  +  IL L RR    +   R+G    S+  +         +           ++G   A     FG  +L YDPY +  +E ALG + VS L +LL  S  ++LHC L
Sbjct:  102 LGIAVCNVPAASVEETADSTLCHILNLYRRTTWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGIERALGLQRVSTLQDLLFHSDCVTLHCGL 228          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: CTBP2_XENLA (C-terminal-binding protein 2 OS=Xenopus laevis GN=ctbp2 PE=1 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 1.110e-12
Identity = 30/63 (47.62%), Postives = 38/63 (60.32%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAPLFFQRTLRIA 576
            HLIN  ++  M+ G  L+NT RGGLVD  AL  ALKDG +    LDV+E +   F Q  L+ A
Sbjct:  248 HLINDFTIKQMRQGCFLVNTARGGLVDEKALAQALKDGRIRGAALDVHESEPFSFSQGPLKDA 310          

HSP 2 Score: 38.891 bits (89), Expect = 1.110e-12
Identity = 36/127 (28.35%), Postives = 55/127 (43.31%), Query Frame = 3
Query:   18 LGLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGD-----FSLHGLTG--FDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVE-ALG-ARYVSLHELLGESQIISLHCPL 371
            LG+ +  +P+ S    A+  +  IL L RR+   +   R+G+       +  + G    +           +IG   A     F   ++ YDPY    VE +LG  R  +L ELL  S  I+LHC L
Sbjct:  116 LGIAVCNIPSASVEETADSTLCHILNLYRRVTWLHQAMREGNRPASVEQIREVAGGAARIRGETLGIIGLGRIGQAVALRAKAFNFTVIFYDPYLADGVERSLGLQRMATLQELLMHSDCITLHCNL 242          
The following BLAST results are available for this feature:
BLAST of EY674794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
LDHD_LACPE5.651e-1631.40D-lactate dehydrogenase OS=Lactobacillus pentosus ... [more]
LDHD_STRP11.241e-1530.25D-lactate dehydrogenase OS=Streptococcus pyogenes ... [more]
SERA_ARATH5.878e-1527.64D-3-phosphoglycerate dehydrogenase, chloroplastic ... [more]
SERA_BACSU7.670e-1541.82D-3-phosphoglycerate dehydrogenase OS=Bacillus sub... [more]
GYAR_PYRHO7.763e-1543.75Glyoxylate reductase OS=Pyrococcus horikoshii GN=g... [more]
Y1556_HAEIN6.317e-1459.26Putative 2-hydroxyacid dehydrogenase HI1556 OS=Hae... [more]
CTBP1_HUMAN1.371e-1347.62C-terminal-binding protein 1 OS=Homo sapiens GN=CT... [more]
CTBP1_MOUSE1.781e-1347.62C-terminal-binding protein 1 OS=Mus musculus GN=Ct... [more]
CTBP1_RAT1.782e-1347.62C-terminal-binding protein 1 OS=Rattus norvegicus ... [more]
CTBP2_XENLA1.110e-1247.62C-terminal-binding protein 2 OS=Xenopus laevis GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-E07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674794 ID=EY674794; Name=EY674794; organism=Citrus sinensis; type=EST; length=1050bp
CTGCCCGCCGCCAACGCCTGGGCCTCCCTATCGTGCGGGTGCCGGCCTAT
TCGCCCCATGCGGTGGCCGAACATGCGGTCGCACTGATCCTGGCCCTCAA
TCGCCGCCTGCACCGCGCCTACAACCGTACCCGCGACGGTGACTTCAGCC
TGCATGGCCTGACCGGTTTCGACCTGGTGGGCAAGACCGTCGGCGTGGTC
GGCACCGGGCAGATCGGCGCCACATTCGCCAAGATCATGGCCGGGTTCGG
CTGCCAGTTGCTGGCGTACGATCCTTACCCCAACCCGCAGGTCGAGGCCC
TCGGTGCGCGCTATGTGAGCCTGCATGAGTTGCTGGGCGAGTCGCAGATC
ATCAGCCTGCATTGCCCGCTGACGGCGGACAGCAAAACACCTGATCAACG
CCCAAAGCCTGGCCCATATGCAGCCCGGCGCGATGCTGATCAATACCGGG
CGCGGGGGCCTGGTGGACACCCCGGCGCTGATTCACGCACTCAAGGACGG
CCACCTCGGCTATCTGGGGCTGGATGTGTATGAAAAAAAAGCCCCACTGT
TTTTTCAAAGAACGCTCCGAATTGCCAATGCAAAAAGAAATTATTGGGCC
GCGCCTGGCTGACCTTCCCCCCACTGGATTATCACCGGCCCACCAAGGCT
TTTCTGGACCCGCTAAAGCCCTTGTGGGGGCAATTGCCGGTAAAAAACCC
TTGGCTCAAATTCCAGGTCTGTGGGATTGGGGGGGATAGGCAACAAAACT
CCCTTTAAAAAGAGATATTTAAGTGGATCAAAAATACCCCACGCCCATTG
AAAGAGGGGGGGGGCCCTGAGAAAAAAAAAAAACCACACCACCAAATAAT
AAGAAGAAAAACAGAGGGACAAAAAAAAACAATATTCCCCATTTTATAAA
TTTTGCGAGAAACCCCAAAACAAAAACCCCCTCCATTTATAATAATGGAG
CCCACGCCCCACCATGGGAGCGGCGGAGGGGCCCTATTTTGACACAAAAA
CTGCAACACCAAGGAACAGCACAGTGAGGTGGGGTGGAACCCCTTATCGA
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