EY674787
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY674787 vs. ExPASy Swiss-Prot
Match: CNOT7_XENTR (CCR4-NOT transcription complex subunit 7 OS=Xenopus tropicalis GN=cnot7 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 3.853e-28 Identity = 65/120 (54.17%), Postives = 88/120 (73.33%), Query Frame = 1 Query: 1 EGVDSPLFAELMMSSGLVPPESVSWVTFHSAYDFGYLVKILTRPSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYF 360 EG+++ FAEL M+SG+V E V W++FHS YDFGYL+KILT +LP +F ILR+FF IYDVK++M+ C++L GGL VA L++ R +G HQAGSDSLLT AF K+R+++F Sbjct: 129 EGIETQYFAELFMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEVELDFFEILRLFF-PVIYDVKYLMKSCKNLKGGLQEVAEQLELKR-IGPQHQAGSDSLLTGMAFFKMREMFF 246
BLAST of EY674787 vs. ExPASy Swiss-Prot
Match: CNOT7_DANRE (CCR4-NOT transcription complex subunit 7 OS=Danio rerio GN=cnot7 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 6.572e-28 Identity = 64/120 (53.33%), Postives = 88/120 (73.33%), Query Frame = 1 Query: 1 EGVDSPLFAELMMSSGLVPPESVSWVTFHSAYDFGYLVKILTRPSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYF 360 EG+++ FAEL+M+SG+V E V W++FHS YDFGYL+KIL+ LP +F ILR+FF IYDVK++M+ C++L GGL VA L++ R +G HQAGSDSLLT AF K+R+++F Sbjct: 129 EGIETMYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILSNSKLPDEEVDFFEILRLFF-PIIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMREMFF 246
BLAST of EY674787 vs. ExPASy Swiss-Prot
Match: CNOT8_MOUSE (CCR4-NOT transcription complex subunit 8 OS=Mus musculus GN=Cnot8 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 8.584e-28 Identity = 63/120 (52.50%), Postives = 90/120 (75.00%), Query Frame = 1 Query: 1 EGVDSPLFAELMMSSGLVPPESVSWVTFHSAYDFGYLVKILTRPSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYF 360 EG+D+ FAEL+M+SG+V ++V W++FHS YDFGY+VK+LT LP EF IL +FF +IYDVK++M+ C++L GGL VA LD+ R +G+ HQAGSDSLLT AF ++++++F Sbjct: 129 EGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHEFFHILNLFF-PSIYDVKYLMKSCKNLKGGLQEVADQLDLQR-IGRQHQAGSDSLLTGMAFFRMKELFF 246
BLAST of EY674787 vs. ExPASy Swiss-Prot
Match: CNOT8_HUMAN (CCR4-NOT transcription complex subunit 8 OS=Homo sapiens GN=CNOT8 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 8.584e-28 Identity = 63/120 (52.50%), Postives = 90/120 (75.00%), Query Frame = 1 Query: 1 EGVDSPLFAELMMSSGLVPPESVSWVTFHSAYDFGYLVKILTRPSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYF 360 EG+D+ FAEL+M+SG+V ++V W++FHS YDFGY+VK+LT LP EF IL +FF +IYDVK++M+ C++L GGL VA LD+ R +G+ HQAGSDSLLT AF ++++++F Sbjct: 129 EGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHEFFHILNLFF-PSIYDVKYLMKSCKNLKGGLQEVADQLDLQR-IGRQHQAGSDSLLTGMAFFRMKELFF 246
BLAST of EY674787 vs. ExPASy Swiss-Prot
Match: CAF1B_ARATH (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana GN=CAF1-2 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.619e-26 Identity = 59/119 (49.58%), Postives = 82/119 (68.91%), Query Frame = 1 Query: 4 GVDSPLFAELMMSSGLVPPESVSWVTFHSAYDFGYLVKILTRPSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYF 360 GVD+ FAEL+M SG+V + + WVTFH YDFGYL+K+L+ LP + +F + FF +YD+K++M FC +LYGGL+++A L V R VG HQAGSDSLLT F K+++ +F Sbjct: 145 GVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPEEISDFFDQMEKFF-PVVYDIKYLMGFCTNLYGGLEKIAELLGVKR-VGISHQAGSDSLLTLRTFIKMKEFFF 261
BLAST of EY674787 vs. ExPASy Swiss-Prot
Match: CAF1_SCHPO (Poly(A) ribonuclease pop2 OS=Schizosaccharomyces pombe GN=caf1 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 7.038e-22 Identity = 56/119 (47.06%), Postives = 78/119 (65.55%), Query Frame = 1 Query: 4 GVDSPLFAELMMSSGLVPPESVSWVTFHSAYDFGYLVKILTRPSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYF 360 G++ FAEL++ SGLV E V+W+TFHS YDF YL+K +T+ LP+ +EF IL ++F N YD+K+IM+ + GL +A L + R +G HQAGSD+LLT F +IR YF Sbjct: 140 GIEPADFAELLIGSGLVLQEEVTWITFHSGYDFAYLLKAMTQIPLPAEYEEFYKILCIYFPKN-YDIKYIMKSVLNNSKGLQDIADDLQIHR-IGPQHQAGSDALLTARIFFEIRSRYF 256
BLAST of EY674787 vs. ExPASy Swiss-Prot
Match: CNOT7_CAEEL (CCR4-NOT transcription complex subunit 7 OS=Caenorhabditis elegans GN=ccf-1 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 3.383e-16 Identity = 52/123 (42.28%), Postives = 72/123 (58.54%), Query Frame = 1 Query: 4 GVDSPLFAELMMSSGLVPPESVSWVTFHSAYDFGYLVKILTRPSLPSGLDEFLTILRVFFGNNIYDVKHIMRF--CQS--LYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYF 360 G+ + +F EL+ +SGL+ ++W+TF S YDFGYL+K +T LP F + F + +D+K ++R C S L GGL VA LDV R G HQAGSD+LLT F KI+ +F Sbjct: 141 GIPTAVFGELLTTSGLITDPRITWLTFSSGYDFGYLLKSITLGDLPKEESTFFMCHKTLFPTS-FDIKILLRTPNCASAKLKGGLQEVADQLDVKRQ-GVRHQAGSDALLTAATFFKIKKQFF 261
BLAST of EY674787 vs. ExPASy Swiss-Prot
Match: CAF1A_ARATH (Probable CCR4-associated factor 1 homolog 1 OS=Arabidopsis thaliana GN=CAF1-1 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.738e-12 Identity = 43/99 (43.43%), Postives = 59/99 (59.60%), Query Frame = 1 Query: 67 VSWVTFHSAYDFGYLVKILTRPSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSL--YGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVY 357 V +VTF AYDF Y + IL LP EF T + FG +YD K + FC+ L + GL ++A+ L ++R VG+ H AGSDSL+T F K++ VY Sbjct: 145 VEFVTFQGAYDFAYFLSILNHGKLPETHGEFATEVVKVFG-QVYDTKVMAGFCEGLGEHLGLSKLAQLLQITR-VGRAHHAGSDSLMTALVFIKLKHVY 241
BLAST of EY674787 vs. ExPASy Swiss-Prot
Match: CAF1E_ARATH (Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana GN=CAF1-5 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 6.603e-12 Identity = 42/93 (45.16%), Postives = 51/93 (54.84%), Query Frame = 1 Query: 73 WVTFHSAYDFGYLVKILTRPSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYG--GLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKI 345 WVTF +YD YL+K LTR LP EF ++ G +YDVK + C L GL R+A L + R VGK H AGSDS LT F K+ Sbjct: 137 WVTFQGSYDKAYLLKGLTRKPLPETSKEFDETVQQLLGRFVYDVKKMAGLCSGLSSRFGLQRIADVLQM-RRVGKAHHAGSDSELTARVFTKL 228 The following BLAST results are available for this feature:
BLAST of EY674787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >EY674787 ID=EY674787; Name=EY674787; organism=Citrus sinensis; type=EST; length=1064bpback to top |