EY674781

Overview
NameEY674781
Unique NameEY674781
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length985
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY674781 vs. ExPASy Swiss-Prot
Match: SBP1_XENTR (Selenium-binding protein 1 OS=Xenopus tropicalis GN=selenbp1 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 7.180e-42
Identity = 84/150 (56.00%), Postives = 106/150 (70.67%), Query Frame = 1 
Query:   70 CCAKGPGYATPLEAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRILRS*HTKKNPRAPSLHKVVEPADIVQKTGLSYPHTGSLPLLSGDILVSCL 519
            C + GPGY TPL+AM GPRE++LY+ C+Y  TG  KPDYLATVD +P S  YS+VIHRLP+P   DELHHSGWN+CSSCYGD+S  R  L+LP L+S RI        +PRAP +HK VEP ++  K GL+  HT S  L  G+I++S +
Sbjct:    4 CGSCGPGYKTPLDAMKGPREEILYLPCIYRNTGINKPDYLATVDVNPKSPKYSQVIHRLPMPNTNDELHHSGWNTCSSCYGDASKVRNKLILPCLISSRIYVV-DVGTDPRAPRIHKTVEPYEVFWKCGLANLHT-SHCLGCGEIMISSI 151
The following BLAST results are available for this feature:
BLAST of EY674781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
SBP1_XENTR7.180e-4256.00Selenium-binding protein 1 OS=Xenopus tropicalis G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-D02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674781 ID=EY674781; Name=EY674781; organism=Citrus sinensis; type=EST; length=985bp
TTTTTCTTGTAAGAAACCCTAACTGATACTGTGGTGGCTGAACACCGGTC
GAGCAATCCTGGGCATGGTTGCTGCGCGAAAGGGCCTGGGTATGCAACTC
CACTCGAAGCCATGTCTGGTCCTAGAGAGAAACTTCTCTATGTCACTTGT
CTTTACACTGGTACTGGAAGAGAGAAGCCTGATTACCTAGCGACAGTGGA
TGCGGATCCTAGCTCTTCTTCTTATTCAAAAGTTATTCATCGGCTCCCTG
TGCCATACATTGGTGATGAACTACATCATTCGGGATGGAATTCATGTAGC
TCATGCTATGGAGATTCATCTGCTCAACGGCGTTTTCTTGTCTTGCCTTC
TTTGGTATCTGGTCGTATATTACGTAGTTGACACACAAAAAAAAATCCAA
GGGCTCCCTCTTTGCATAAGGTTGTTGAACCTGCAGATATTGTACAGAAA
ACAGGATTATCTTATCCTCACACGGGCTCATTGCCCTTGCTTTCTGGTGA
TATCCTGGTGTCATGCCTTTGGAAATAAGGAGGGAAAAAGGCTAAGGGAA
AAGGAATTTCTTCCTCCTTTGAACTCAAAAATTCAGTGGGGAAAAGGAAG
AATGGGAAAAAACCCAGGGTCCCAGTCCTGGCCTTTCCGTTTTATAATTT
TCGGGGTCACCACCCTCGACCACCAAATAAATATGATTAAACTTCTTGCT
TGGGGGGAAACCCCCCCTCGGTCTTTTCACCAAAAGGGGTTCTAAACCCA
TTAAAACAGGGTGCCATGTGAAAAGGGTACTTATTGAAGGAGGAGGAGAA
CAGCTGTTATGTTGGTTACAATGATAGGGCACCCGGGTGATGGGGAAAAA
AAATATAAAAAATTAAGAAAATTTTTTTGTATTTTTTTTTTAGAGAGATA
TAATATATGAGGGCCCCCAAAATTAATTCACAATCCCCGATGTGAGAGAA
TATATTGAGAAGTGGATGTTTTCTATTCTTTGGGT
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