EY674778

Overview
NameEY674778
Unique NameEY674778
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1013
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674778 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 3.010e-83
Identity = 112/139 (80.58%), Postives = 126/139 (90.65%), Query Frame = 1
Query:   16 EAARPVEDVKKDPEAATTAIVLRRRLQLMMYNNMYRIMFDRRFQSQDDPLFNRLKALNGERSRLAHSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNES-LKCAIDHILDAQTKGE 429
            EAA  VEDVKK+P+AA +  V+RRRLQLMMYNNMYRIMFDRRF+S++DP+F RL+ALNGERSRLA SFEYNYGDFIPILRPFL+GYLKICKEVKE RL+LFKDYFV+ERKKL STKS +N + LKCAIDHILDAQ KGE
Sbjct:  153 EAAAVVEDVKKNPDAAVSGTVIRRRLQLMMYNNMYRIMFDRRFESEEDPIFQRLRALNGERSRLAQSFEYNYGDFIPILRPFLKGYLKICKEVKETRLKLFKDYFVDERKKLGSTKSTNNNNELKCAIDHILDAQRKGE 291          

HSP 2 Score: 102.449 bits (254), Expect = 3.010e-83
Identity = 55/100 (55.00%), Postives = 69/100 (69.00%), Query Frame = 2
Query:  416 RQREKINEDNVLYIVENINVAAIETTLWSIEWGNAKLVNHPEIRKKLRNELDTVLGPGXXXXXXXXXXXXXXXALIRGTPSPLRMGFPLFCPQLEPFHNA 715
            +++ +INEDNVLYIVENINVAAIETTLWSIEWG A+LVNHPEI++KLR+E+D VLG G               A+++ T   LRM  PL  P +   H+A
Sbjct:  287 QRKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQQKLRDEIDRVLGAGHQVTEPDIQKLPYLQAVVKET-LRLRMAIPLLVPHMN-LHDA 384          
BLAST of EY674778 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 6.680e-83
Identity = 110/138 (79.71%), Postives = 125/138 (90.58%), Query Frame = 1
Query:   16 EAARPVEDVKKDPEAATTAIVLRRRLQLMMYNNMYRIMFDRRFQSQDDPLFNRLKALNGERSRLAHSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGE 429
            EAA  V+DVKK+P+AAT  +V+R+RLQLMMYNNM+RIMFDRRF+S+DDPLF +LK LNGERSRLA SFEYNYGDFIPILRPFL+GYLK+CKEVKE+R QLFKDYFV+ERKKL STKSM N  LKCAIDHILDA+ KGE
Sbjct:  153 EAAAVVDDVKKNPKAATEGVVIRKRLQLMMYNNMFRIMFDRRFESEDDPLFVKLKMLNGERSRLAQSFEYNYGDFIPILRPFLKGYLKLCKEVKEKRFQLFKDYFVDERKKLGSTKSMDNNQLKCAIDHILDAKDKGE 290          

HSP 2 Score: 98.5969 bits (244), Expect = 6.680e-83
Identity = 55/100 (55.00%), Postives = 66/100 (66.00%), Query Frame = 2
Query:  416 RQREKINEDNVLYIVENINVAAIETTLWSIEWGNAKLVNHPEIRKKLRNELDTVLGPGXXXXXXXXXXXXXXXALIRGTPSPLRMGFPLFCPQLEPFHNA 715
            + + +INEDNVLYIVENINVAAIETTLWSIEW  A+LVNHPEI+ KLR+EL + LGPG               A+I+ T   LRM  PL  P +   H+A
Sbjct:  286 KDKGEINEDNVLYIVENINVAAIETTLWSIEWAIAELVNHPEIQAKLRHELVSQLGPGVQVTEPDLHKLPYLQAVIKET-LRLRMAIPLLVPHMN-LHDA 383          
BLAST of EY674778 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 228.024 bits (580), Expect = 1.482e-82
Identity = 111/138 (80.43%), Postives = 124/138 (89.86%), Query Frame = 1
Query:   16 EAARPVEDVKKDPEAATTAIVLRRRLQLMMYNNMYRIMFDRRFQSQDDPLFNRLKALNGERSRLAHSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGE 429
            EAA  V+DVKK+ +A+   IV+RRRLQLMMYN MYRIMFDRRF+S++DPLF +LKALNGERSRLA SFEYNYGDFIPILRPFL+GYLK+CKEVK+RRLQLFKDYFV+ERKKL STKS  NE LKCAIDHILDAQ KGE
Sbjct:  153 EAASVVDDVKKNSKASVNGIVIRRRLQLMMYNIMYRIMFDRRFESEEDPLFVKLKALNGERSRLAQSFEYNYGDFIPILRPFLKGYLKVCKEVKDRRLQLFKDYFVDERKKLGSTKSTYNEGLKCAIDHILDAQKKGE 290          

HSP 2 Score: 100.908 bits (250), Expect = 1.482e-82
Identity = 55/100 (55.00%), Postives = 67/100 (67.00%), Query Frame = 2
Query:  416 RQREKINEDNVLYIVENINVAAIETTLWSIEWGNAKLVNHPEIRKKLRNELDTVLGPGXXXXXXXXXXXXXXXALIRGTPSPLRMGFPLFCPQLEPFHNA 715
            +++ +IN+DNVLYIVENINVAAIETTLWSIEWG A+LVNH EI+ KLR E+D VLGPG               A+I+ T   LRM  PL  P +   H+A
Sbjct:  286 QKKGEINDDNVLYIVENINVAAIETTLWSIEWGIAELVNHQEIQNKLREEMDKVLGPGHQVTEPDLEKLPYLQAVIKET-LRLRMAIPLLVPHMN-LHDA 383          
BLAST of EY674778 vs. ExPASy Swiss-Prot
Match: TCMO_MEDSA (Trans-cinnamate 4-monooxygenase OS=Medicago sativa GN=CYP73A3 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 4.292e-79
Identity = 109/139 (78.42%), Postives = 122/139 (87.77%), Query Frame = 1
Query:   16 EAARPVEDVKKDPEAATTAIVLRRRLQLMMYNNMYRIMFDRRFQSQDDPLFNRLKALNGERSRLAHSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKS-MSNESLKCAIDHILDAQTKGE 429
            EA   V DVK + EA+   IV+R+RLQLMMYN MYRIMFDRRF+S++DPLF +LKALNGERSRLA SFEYNYGDFIPILRPFL+GYLK+CKEVK+RRLQLFKDYFV+ERKKL STKS  SN+ LKCAIDHILDAQ KGE
Sbjct:  153 EAESVVNDVKNNAEASVGGIVIRKRLQLMMYNIMYRIMFDRRFESEEDPLFVKLKALNGERSRLAQSFEYNYGDFIPILRPFLKGYLKVCKEVKDRRLQLFKDYFVDERKKLESTKSTTSNDGLKCAIDHILDAQKKGE 291          

HSP 2 Score: 98.2117 bits (243), Expect = 4.292e-79
Identity = 51/94 (54.26%), Postives = 64/94 (68.09%), Query Frame = 2
Query:  416 RQREKINEDNVLYIVENINVAAIETTLWSIEWGNAKLVNHPEIRKKLRNELDTVLGPGXXXXXXXXXXXXXXXALIRGTPSPLRMGFPLFCPQL 697
            +++ +IN+DNVLYIVENINVAAIETTLWSIEWG A+LVNH +I+ K+R E+D VLGPG               A+I+ T   LRM  PL  P +
Sbjct:  287 QKKGEINDDNVLYIVENINVAAIETTLWSIEWGIAELVNHQDIQNKVREEMDRVLGPGHQVTEPDLHKLPYLQAVIKET-LRLRMAIPLLVPHM 379          
The following BLAST results are available for this feature:
BLAST of EY674778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
TCMO_SOYBN3.010e-8380.58Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
TCMO_ZINEL6.680e-8379.71Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
TCMO_PEA1.482e-8280.43Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
TCMO_MEDSA4.292e-7978.42Trans-cinnamate 4-monooxygenase OS=Medicago sativa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-C11-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674778 ID=EY674778; Name=EY674778; organism=Citrus sinensis; type=EST; length=1013bp
CCACGCGTCCGAGACGAGGCCGCTAGACCCGTTGAGGATGTTAAGAAGGA
CCCCGAGGCGGCGACCACCGCGATCGTCTTGAGGAGGCGGCTGCAGCTTA
TGATGTACAACAACATGTACAGGATTATGTTTGATAGAAGATTCCAGAGT
CAGGATGATCCTTTGTTTAACAGATTAAAGGCTTTGAATGGTGAGAGGAG
TCGGTTGGCCCATAGCTTTGAGTACAATTACGGTGATTTTATTCCCATTT
TGAGACCTTTCTTGAGAGGCTACTTGAAGATTTGTAAGGAAGTAAAAGAA
AGGAGACTCCAGCTCTTCAAGGACTACTTTGTTGAGGAGAGAAAGAAATT
GGCAAGCACGAAGAGCATGAGTAATGAAAGCTTGAAATGCGCAATCGATC
ATATTTTGGACGCTCAGACAAAGGGAGAAAATCAACGAGGACAACGTTCT
ATACATCGTTGAAAACATCAATGTTGCCGCAATCGAGACAACTCTTTGGT
CGATCGAGTGGGGGAATGCAAAGCTGGTGAATCATCCTGAAATCCGAAAG
AAGCTCCGCAATGAACTTGACACCGTGCTTGGTCCTGGTCCTCAAAACCC
TGAGCCGGACCCCCACAAACCACCCCACCTTCCGGCCTTGATCAGAGGAA
CTCCTTCCCCTTTAAGAATGGGATTTCCTCTTTTTTGCCCCCAACTGGAA
CCTTTCCATAACGCCCACCCTTGGGGGCCACACACTTCCCCGCTGGAAAA
ACAAAATCCAAATTGAAAACGCGTGGGGGGCCCCCCAAAAACCCCCCCCC
CCAGGGGAAAAAACCTGTAAAAAAATTCGGGCCCTGAAAAGGTTTTTTGG
AAGGAAAAAGATCCCAAGGTGTTTTGGAAGCAAAAAGGGGAAAATAAACT
TTCCCTATTTACCCTTCCCCTTTCTCGCGGGGTGTGGAGAAAAAAAAAAA
AAAACAACCCGCCCGGCGAAAAAATTAATCACCACTTGTTTCTTTTTTTC
TGCCCATAATTTT
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