EY674775

Overview
NameEY674775
Unique NameEY674775
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1020
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674775 vs. ExPASy Swiss-Prot
Match: GL16_ARATH (Germin-like protein subfamily 1 member 6 OS=Arabidopsis thaliana GN=At3g04200 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.564e-23
Identity = 61/138 (44.20%), Postives = 84/138 (60.87%), Query Frame = 2
Query:  101 VNDFCVADLKLSDSPA-GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQF*AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLFAFSSKFR 505
            + DFCVA  + +     G  C  P  VTA+DF +SGL +A NTT+ + + VT   V +   +N LG+SLARLD A+GG  P H HP A+EIL+V  G +  GF+SS+   N ++ K LK+GD+ +FP GL  F    R
Sbjct:   31 LQDFCVAASETNRVFVNGKFCKDPKSVTANDFSYSGLNIARNTTNFLGSNVTTVDVNKIPGLNTLGVSLARLDFAQGGQNPPHIHPRATEILVVTKGKLLVGFVSSNQDNNRLFYKVLKRGDVFVFPIGLIHFQMNVR 168          
BLAST of EY674775 vs. ExPASy Swiss-Prot
Match: GL37_ORYSJ (Germin-like protein 3-7 OS=Oryza sativa subsp. japonica GN=GER7 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 8.768e-23
Identity = 56/134 (41.79%), Postives = 84/134 (62.69%), Query Frame = 2
Query:  101 VNDFCVADLKLSD--SPA--GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQF*AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLFAF 490
            + DFCVA  +     SPA  G+PC P + V +DDF F+GL  AG+T +   A++ P  V  F A+N LG+++ R+DLA GGV P+H+HP A+E++ V+ G +  GF+ S+A   Y K + +G+    P+GL  F
Sbjct:   40 IQDFCVAVPRAGGEASPAYPGFPCKPASAVVSDDFFFAGLAAAGSTDNPFGASLKPGNVEAFPALNTLGVAINRVDLAPGGVNPLHSHPRAAELVHVITGRMLVGFV-STAGKYYSKVVGEGETFAIPRGLMHF 172          

HSP 2 Score: 24.2534 bits (51), Expect = 8.768e-23
Identity = 10/23 (43.48%), Postives = 13/23 (56.52%), Query Frame = 3
Query:  474 KGCLHFQVNSGADRALSFVYFNS 542
            +G +HFQ N G   A +   FNS
Sbjct:  167 RGLMHFQYNPGNASARAMTVFNS 189          
BLAST of EY674775 vs. ExPASy Swiss-Prot
Match: GLT2_ARATH (Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana GN=At1g18980 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 8.782e-23
Identity = 57/130 (43.85%), Postives = 83/130 (63.85%), Query Frame = 2
Query:  101 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQF*AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLFAF 490
            + DFCV DLK S S  G+PC   + V+A DF FSGLG   NT++    AV+PA V  F  +N LGLS+  ++ A GGV P H+HP A+E  +V+ G +  GF++++ NT++ K L  G++ + P+GL  F
Sbjct:   33 LQDFCVGDLKASPSINGFPC--KSSVSASDFFFSGLGGPLNTSTPNGVAVSPANVLTFPGLNTLGLSMNNVEFAPGGVNPPHSHPRATEAGVVIEGSVFVGFLTTN-NTLFSKVLNAGEMFVVPRGLVHF 159          

HSP 2 Score: 22.3274 bits (46), Expect = 8.782e-23
Identity = 10/23 (43.48%), Postives = 13/23 (56.52%), Query Frame = 3
Query:  474 KGCLHFQVNSGADRALSFVYFNS 542
            +G +HFQ N G  +A     FNS
Sbjct:  154 RGLVHFQWNVGKVKARLITSFNS 176          
BLAST of EY674775 vs. ExPASy Swiss-Prot
Match: GL120_ARATH (Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana GN=GLP5A PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.782e-23
Identity = 59/134 (44.03%), Postives = 77/134 (57.46%), Query Frame = 2
Query:  101 VNDFCVA--DLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQF*AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLFAF 490
            + DFCVA  DLK      G  C  P  V A DF FSGL V GNT + + + VT   V Q   +N +G+SL R+D A  G  P HTHP  SEIL++V G +  GF+SS+   N ++ K L  GD+ +FP G+  F
Sbjct:   28 LQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHF 160          

HSP 2 Score: 28.4906 bits (62), Expect = 8.782e-23
Identity = 18/49 (36.73%), Postives = 24/49 (48.98%), Query Frame = 3
Query:  468 FHKGCLHFQVNSGADRALSFVYFNSPES---------WTPNPPISPYLL 587
            F  G +HFQVN G   A++F   +S  +         +  NPPI P LL
Sbjct:  153 FPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELL 201          
BLAST of EY674775 vs. ExPASy Swiss-Prot
Match: GL38_ORYSJ (Germin-like protein 3-8 OS=Oryza sativa subsp. japonica GN=Os03g0804700 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.142e-22
Identity = 59/138 (42.75%), Postives = 83/138 (60.14%), Query Frame = 2
Query:  101 VNDFCVA------DLKLSDSPA--GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQF*AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLFAF 490
            V DFCVA      D   +  PA  G+PC P + V +DDF F+GL VA +T +     VT A    F  +N LG+S+ R+DLA GGV P+H+HP A+E++ VV G + AGF+ S+A   Y K L +G+  + P+G+  F
Sbjct:   30 VQDFCVAVVPRAGDAAAAACPAYPGFPCKPASTVVSDDFFFAGLAVASDTDNRFGFNVTAANAETFPGLNTLGVSIGRVDLAPGGVNPLHSHPRATELIHVVAGRVLAGFV-STAGEFYSKVLGEGETFVVPRGMIHF 166          

HSP 2 Score: 22.7126 bits (47), Expect = 1.142e-22
Identity = 10/23 (43.48%), Postives = 12/23 (52.17%), Query Frame = 3
Query:  474 KGCLHFQVNSGADRALSFVYFNS 542
            +G +HFQ N G   A     FNS
Sbjct:  161 RGMIHFQYNVGGVAAQVITAFNS 183          
BLAST of EY674775 vs. ExPASy Swiss-Prot
Match: GL116_ARATH (Germin-like protein subfamily 1 member 16 OS=Arabidopsis thaliana GN=At5g39130 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.487e-22
Identity = 59/134 (44.03%), Postives = 77/134 (57.46%), Query Frame = 2
Query:  101 VNDFCVA--DLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQF*AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLFAF 490
            + DFCVA  DLK      G  C  P  V A DF FSGL V GNT + + + VT   V Q   +N +G+SL R+D A  G  P HTHP  SEIL++V G +  GF+SS+   N ++ K L  GD+ +FP G+  F
Sbjct:   28 LQDFCVAIDDLK-GVFVNGRFCKDPERVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHF 160          

HSP 2 Score: 27.7202 bits (60), Expect = 1.487e-22
Identity = 17/49 (34.69%), Postives = 24/49 (48.98%), Query Frame = 3
Query:  468 FHKGCLHFQVNSGADRALSFVYFNSPES---------WTPNPPISPYLL 587
            F  G +HFQ+N G   A++F   +S  +         +  NPPI P LL
Sbjct:  153 FPIGMIHFQLNIGKIPAIAFAGLSSQNAGVITIANTVFGSNPPIYPELL 201          
BLAST of EY674775 vs. ExPASy Swiss-Prot
Match: GL118_ARATH (Germin-like protein subfamily 1 member 18 OS=Arabidopsis thaliana GN=GLP2A PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.935e-22
Identity = 58/134 (43.28%), Postives = 77/134 (57.46%), Query Frame = 2
Query:  101 VNDFCVA--DLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQF*AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLFAF 490
            + DFCVA  DLK      G  C  P  V A DF FSGL + GNT + + + VT   V Q   +N +G+SL R+D A  G  P HTHP  SEIL++V G +  GF+SS+   N ++ K L  GD+ +FP G+  F
Sbjct:   28 LQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNMPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHF 160          

HSP 2 Score: 28.4906 bits (62), Expect = 1.935e-22
Identity = 18/49 (36.73%), Postives = 24/49 (48.98%), Query Frame = 3
Query:  468 FHKGCLHFQVNSGADRALSFVYFNSPES---------WTPNPPISPYLL 587
            F  G +HFQVN G   A++F   +S  +         +  NPPI P LL
Sbjct:  153 FPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELL 201          
BLAST of EY674775 vs. ExPASy Swiss-Prot
Match: GL23_ARATH (Germin-like protein subfamily 2 member 3 OS=Arabidopsis thaliana GN=GLP8 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.959e-22
Identity = 57/132 (43.18%), Postives = 80/132 (60.61%), Query Frame = 2
Query:   98 MVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTT-SIINAAVTPAFVAQF*AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLFAF 490
            M+ DFCVADL       GYPC  PA VT +DF F GL  A  T  S + +AVT A V +   +N LG+S++R+D A GG+ P H HP ASE + V+ G +  GF++++   +  K + KGD+ +FP+ L  F
Sbjct:   26 MLQDFCVADLSNGLKVNGYPCKDPAKVTPEDFYFIGLATAAATANSSMGSAVTGANVEKVPGLNTLGVSISRIDYAPGGLNPPHLHPRASEAIFVLEGRLFVGFLTTTGKLI-SKHVNKGDVFVFPKALLHF 156          
BLAST of EY674775 vs. ExPASy Swiss-Prot
Match: GL112_ARATH (Putative germin-like protein subfamily 1 member 12 OS=Arabidopsis thaliana GN=At5g38960 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.274e-22
Identity = 61/138 (44.20%), Postives = 79/138 (57.25%), Query Frame = 2
Query:  101 VNDFCVADLKLSDSPA------GYPCVPPAMVTADDFVFSGLGVAGNT-TSIINAAVTPAFVAQF*AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS-SANTVYVKTLKKGDIMIFPQGLFAF 490
            + DFC+      ++PA      G  C  P +VTADDF FSGL  A  T +S + + VT   V Q   +N LG+SL R+D    G  P HTHP A+EILLV  G +  GF SS   N ++ KTL KGD+ +FP+GL  F
Sbjct:   30 LQDFCIG----VNTPANALFVNGKFCKDPKLVTADDFYFSGLDKARTTESSPVGSNVTTVNVNQIPGLNTLGISLVRIDYGINGQNPPHTHPRATEILLVQEGTLFVGFFSSFPENRLFNKTLNKGDVFVFPEGLIHF 163          

HSP 2 Score: 28.1054 bits (61), Expect = 3.274e-22
Identity = 16/49 (32.65%), Postives = 23/49 (46.94%), Query Frame = 3
Query:  468 FHKGCLHFQVNSGADRALSFVYFNSPES---------WTPNPPISPYLL 587
            F +G +HFQVN G   A++F   +S            +   PPI P +L
Sbjct:  156 FPEGLIHFQVNIGKQPAVAFASLSSQNPGVIIIGNTLFGSKPPIDPNVL 204          
BLAST of EY674775 vs. ExPASy Swiss-Prot
Match: RHRE_PEA (Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 4.263e-22
Identity = 52/130 (40.00%), Postives = 78/130 (60.00%), Query Frame = 2
Query:  101 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQF*AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLFAF 490
            + D CVAD        G+ C P + VTA+DF  + L   G T +   + VT A V +   +N LG+S+AR+D A GG+ P HTHP A+E++ V+ G +  GFI+++ N +  KT+ KG+  +FP+GL  F
Sbjct:   26 LQDLCVADYASVILVNGFACKPASNVTAEDFFSNLLVKQGATNNTFGSLVTGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHPRATEMVFVLEGQLDVGFITTT-NQLIAKTIAKGETFVFPKGLVHF 154          

HSP 2 Score: 30.0314 bits (66), Expect = 4.263e-22
Identity = 16/41 (39.02%), Postives = 22/41 (53.66%), Query Frame = 3
Query:  468 FHKGCLHFQVNSGADRALSFVYFNSPESWTPNPPISPYLLT 590
            F KG +HFQ N+G + A     FNS    T N P++ +  T
Sbjct:  147 FPKGLVHFQKNNGWEPATVIAGFNSQLPGTVNIPLTLFNAT 187          
The following BLAST results are available for this feature:
BLAST of EY674775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL16_ARATH4.564e-2344.20Germin-like protein subfamily 1 member 6 OS=Arabid... [more]
GL37_ORYSJ8.768e-2341.79Germin-like protein 3-7 OS=Oryza sativa subsp. jap... [more]
GLT2_ARATH8.782e-2343.85Germin-like protein subfamily T member 2 OS=Arabid... [more]
GL120_ARATH8.782e-2344.03Germin-like protein subfamily 1 member 20 OS=Arabi... [more]
GL38_ORYSJ1.142e-2242.75Germin-like protein 3-8 OS=Oryza sativa subsp. jap... [more]
GL116_ARATH1.487e-2244.03Germin-like protein subfamily 1 member 16 OS=Arabi... [more]
GL118_ARATH1.935e-2243.28Germin-like protein subfamily 1 member 18 OS=Arabi... [more]
GL23_ARATH2.959e-2243.18Germin-like protein subfamily 2 member 3 OS=Arabid... [more]
GL112_ARATH3.274e-2244.20Putative germin-like protein subfamily 1 member 12... [more]
RHRE_PEA4.263e-2240.00Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-C08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674775 ID=EY674775; Name=EY674775; organism=Citrus sinensis; type=EST; length=1020bp
CCACGCGTCCGCATCAAAATAACTACACCCCTTATTAGTCAAAATGCTTC
ACATTCTCTTCTTCTTCCCCCCTTTCGTATCCTCTTCCTCCAATGCTATG
GTTAACGACTTCTGCGTCGCTGACCTAAAGCTGTCGGATAGTCCCGCCGG
CTATCCTTGCGTGCCCCCCGCTATGGTTACCGCTGACGACTTCGTATTTT
CGGGCCTCGGCGTGGCCGGAAACACCACGAGCATTATCAACGCGGCAGTG
ACACCTGCATTTGTAGCTCAATTTTAGGCCGTGAATGGGCTCGGACTCTC
CTTGGCACGCCTAGATCTTGCAAAGGGTGGCGTAATCCCAATCCACACTC
ATCCAGCTGCTTCCGAAATCCTTCTTGTTGTGCATGGCTGCATAACTGCC
GGGTTCATTTCCTCTTCAGCTAACACTGTTTACGTAAAGACGCTTAAGAA
GGGAGATATCATGATCTTTCCACAAGGGTTGTTTGCATTTTCAAGTAAAT
TCCGGTGCGGACAGAGCCCTCAGTTTTGTTTACTTCAACAGCCCCGAATC
CTGGACTCCAAATCCACCGATTTCGCCTTATTTGCTAACAACTTGTCTTT
CCAATTGGGGGAGCAAAACCCTTTTCCTTGACGAAGCTTACGGGGAAGAA
GGCTCAAGGGTTTCCCTTGGTGGCAACCGGCAAGGGCTTTATTGTTTACC
CCACATTCTTCAATTTGGGAATTTTTTAAATTCTTTAATTTCCTATTAAT
TTGCCAAAGGTTTTTTGAATTGGTTGGGAAATTCCACAAATTTACAAATT
TTTCCTGGTTCCCCCCTTCCCCCTTTCCTTTTCCTCCCCGGAAAAAAAAA
AATAAAATTTCCCCCCCTAAAAAAAAAAAAAAAAAAAGGGGGGGGCGCTC
CCTCCAAAAAAGAAAACACAAAACTTTTAATTGAGTCGCGGCGTGCGTGG
TGGGAAACGTGAATAAAAACCCTCTTCTTTTTATGGAGGGGTATGCGACC
CTCCCAAAAATATTTTTGCT
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