EY674775

Overview
NameEY674775
Unique NameEY674775
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1020
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674775 vs. ExPASy Swiss-Prot
Match: GL14_ARATH (Germin-like protein subfamily 1 member 4 OS=Arabidopsis thaliana GN=At3g04180 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 7.541e-18
Identity = 54/133 (40.60%), Postives = 74/133 (55.64%), Query Frame = 2
Query:  101 VNDFCVADLKLSDSPA-GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQF*AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLFAF 490
            + D+CVA  + +     G  C  P  VT +DF  SGL V GNT     A  T   V +   +N LG+ +AR D A GG+ P HTHP  S+I LV+ G +  GF+SS+    T++ K L  GD+ +FP+GL  F
Sbjct:   30 LQDYCVATNETNGVYVNGEFCKDPKRVTTNDFYTSGLNVPGNTIIGPGARNTVVDVERLPGLNTLGVDIARYDFAPGGLDPPHTHPRGSQIFLVMKGKLFVGFVSSNEYNYTLFTKVLYPGDVFVFPKGLIHF 162          
BLAST of EY674775 vs. ExPASy Swiss-Prot
Match: GL32_ARATH (Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana GN=At3g10080 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 9.284e-18
Identity = 53/137 (38.69%), Postives = 75/137 (54.74%), Query Frame = 2
Query:  101 VNDFCVADLKLSDSP-------AGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQF*AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLFAF 490
            + DFC+   K   SP          PC   + VT +DFVFSGL  AGN T     A  P     F  +N LG+S  R DL  G + P H HP A+E+  +V G + +GF+ S+ N VY K +++G++M++P+GL  F
Sbjct:   30 IQDFCIP--KPVTSPYHDHHFSTNLPCKNSSEVTTEDFVFSGLKTAGNFTET-GFATVPVGPENFPGLNTLGISFVRADLKPGSINPPHYHPRATEVAHLVKGRVYSGFVDSN-NKVYAKVMEEGEMMVYPKGLVHF 162          

HSP 2 Score: 20.7866 bits (42), Expect = 9.284e-18
Identity = 7/13 (53.85%), Postives = 10/13 (76.92%), Query Frame = 3
Query:  468 FHKGCLHFQVNSG 506
            + KG +HFQ+N G
Sbjct:  155 YPKGLVHFQMNVG 167          
BLAST of EY674775 vs. ExPASy Swiss-Prot
Match: OXO1_HORVU (Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.888e-17
Identity = 56/149 (37.58%), Postives = 87/149 (58.39%), Query Frame = 2
Query:  101 VNDFCVADLK-LSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAAVTPAFVAQF*AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS--SANTVYVKTLKKGDIMIFPQGLFAFSSKFRCGQSPQFCLL 535
            + DFCVADL   + S  G+ C P +    DDF+FS  L  AGNT++   +AVT   VA++   N LG+S+ R+D A GG  P H HP A+EI +V+ G +  G + S  S N +Y + ++ G+  + P+GL  F  +F  G++  + ++
Sbjct:    6 LQDFCVADLDGKAVSVNGHTCKPMSEA-GDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHF--QFNVGKTEAYMVV 151          
BLAST of EY674775 vs. ExPASy Swiss-Prot
Match: GL124_ORYSJ (Putative germin-like protein 12-4 OS=Oryza sativa subsp. japonica GN=Os12g0155000 PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 4.888e-17
Identity = 55/136 (40.44%), Postives = 75/136 (55.15%), Query Frame = 2
Query:  101 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTT-SIINAAVTPAFVAQF*AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSS----ANTVYVKTLKKGDIMIFPQGLFAF 490
            + DFCVAD        G PC     V+ DDF  +  L    +TT S   + VT   V +   +N L +S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+     N ++ KTL KGD+ +FPQGL  F
Sbjct:   28 LQDFCVADKHSPVRVNGLPCKDAKDVSVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLSISMARIDYAPKGQNPPHTHPRATEILTVLEGSLYVGFVTSNQANRENKLFTKTLNKGDVFVFPQGLIHF 163          
BLAST of EY674775 vs. ExPASy Swiss-Prot
Match: GL123_ORYSJ (Putative germin-like protein 12-3 OS=Oryza sativa subsp. japonica GN=Os12g0154900 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.888e-17
Identity = 52/143 (36.36%), Postives = 75/143 (52.45%), Query Frame = 2
Query:  101 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG---------LGVAGNTTSIINAAVTPAFVAQF*AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSS----ANTVYVKTLKKGDIMIFPQGLFAF 490
            + D CVAD        G+PC     V+ DDF  +             AG+  ++IN       V +   +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+     N ++ KTL KGD+ +FP+GL  F
Sbjct:   28 LQDLCVADKNSPVRVNGFPCKDAKDVSVDDFFLAANLDKPMDITKSKAGSNVTLIN-------VMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILSVIEGSLYVGFVTSNQANGENKLFTKTLNKGDVFVFPEGLIHF 163          
BLAST of EY674775 vs. ExPASy Swiss-Prot
Match: GER2_WHEAT (Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 6.384e-17
Identity = 56/143 (39.16%), Postives = 84/143 (58.74%), Query Frame = 2
Query:  101 VNDFCVADLK-LSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAAVTPAFVAQF*AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS--SANTVYVKTLKKGDIMIFPQGLFAFSSKFRCGQS 517
            + DFCVADL   + S  G+ C P +    DDF+FS  L  AGNT++   +AVT   VA++   N LG+S+ R+D A GG  P H HP A+EI +V+ G +  G + S  S N +Y + ++ G+  + P+GL  F  +F  G++
Sbjct:   29 LQDFCVADLDGKAVSVNGHTCKPMSEA-GDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHF--QFNVGKT 168          
BLAST of EY674775 vs. ExPASy Swiss-Prot
Match: GER3_WHEAT (Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.338e-17
Identity = 56/143 (39.16%), Postives = 84/143 (58.74%), Query Frame = 2
Query:  101 VNDFCVADLK-LSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAAVTPAFVAQF*AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS--SANTVYVKTLKKGDIMIFPQGLFAFSSKFRCGQS 517
            + DFCVADL   + S  G+ C P +    DDF+FS  L  AGNT++   +AVT   VA++   N LG+S+ R+D A GG  P H HP A+EI +V+ G +  G + S  S N +Y + ++ G+  + P+GL  F  +F  G++
Sbjct:   29 LQDFCVADLDGKAVSVNGHMCKPMSEA-GDDFLFSSKLAKAGNTSTPNGSAVTDLNVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHF--QFNVGKT 168          
BLAST of EY674775 vs. ExPASy Swiss-Prot
Match: GL111_ORYSJ (Germin-like protein 11-1 OS=Oryza sativa subsp. japonica GN=Os11g0537300 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.426e-16
Identity = 53/162 (32.72%), Postives = 84/162 (51.85%), Query Frame = 2
Query:  149 GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQF*AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLFAFSSKFRCGQSPQFCLL--QQPRILDSKSTDFA--------LFANNLSFQ 604
            G+ C  P+ + A DF    L  AG+  +++ ++       +F  +N LG+S+AR D+A  G +  H+HP ASE++ V  G + AGF  +    ++ KTL +GD+ IFP+GL  F   +  G +  F +L  Q P ++      FA        L A  LSF+
Sbjct:   46 GFFCKSPSTIMASDFKTLLLNHAGDLDNMVRSSANIITATEFPGLNTLGISMARTDIAVSGAVLPHSHPRASEMMFVHSGSVVAGFFDTKGK-LFQKTLAEGDVFIFPRGLVHFIMNYGFGLATTFSVLNSQNPGVVGITHAMFAPDSEVAEGLMARMLSFR 206          
BLAST of EY674775 vs. ExPASy Swiss-Prot
Match: GL33_ORYSJ (Germin-like protein 3-3 OS=Oryza sativa subsp. japonica GN=Os03g0693700 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.168e-16
Identity = 53/143 (37.06%), Postives = 79/143 (55.24%), Query Frame = 2
Query:  101 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAA-VTPAFVAQF*AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS--SANTVYVKTLKKGDIMIFPQGLFAFSSKFRCGQS 517
            + DFCVADL    +  GYPC  P     D+F+FS  L   G+  +  N + VT   VA +  VN LG+S+ R+D A GG  P H HP A+E+ +V+ G +  G I S  + N  Y + ++ G+  + P+GL  F  +F  G++
Sbjct:   32 LQDFCVADLDSEVTLNGYPC-KPTPAAGDEFLFSSRLATGGDVNANPNGSNVTQLDVAGWPGVNTLGVSMNRIDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGSLDTGNRYYSRVVRGGETFVIPRGLMHF--QFNVGKT 171          
BLAST of EY674775 vs. ExPASy Swiss-Prot
Match: GL35_ORYSJ (Germin-like protein 3-5 OS=Oryza sativa subsp. japonica GN=Os03g0693900 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 9.218e-16
Identity = 51/143 (35.66%), Postives = 80/143 (55.94%), Query Frame = 2
Query:  101 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAA-VTPAFVAQF*AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS--SANTVYVKTLKKGDIMIFPQGLFAFSSKFRCGQS 517
            + DFCVADL    +  G+ C  PA    D+F+FS  +   G+  +  N + VT   VA++  VN LG+S+ R+D A GG  P H HP A+E+ +V+ G +  G I +  + N  Y K ++ G+  + P+GL  F  +F  G++
Sbjct:   32 LQDFCVADLNSEVTVNGHAC-KPASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHF--QFNVGKT 171          
The following BLAST results are available for this feature:
BLAST of EY674775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL14_ARATH7.541e-1840.60Germin-like protein subfamily 1 member 4 OS=Arabid... [more]
GL32_ARATH9.284e-1838.69Germin-like protein subfamily 3 member 2 OS=Arabid... [more]
OXO1_HORVU4.888e-1737.58Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1[more]
GL124_ORYSJ4.888e-1740.44Putative germin-like protein 12-4 OS=Oryza sativa ... [more]
GL123_ORYSJ4.888e-1736.36Putative germin-like protein 12-3 OS=Oryza sativa ... [more]
GER2_WHEAT6.384e-1739.16Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 S... [more]
GER3_WHEAT8.338e-1739.16Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 S... [more]
GL111_ORYSJ2.426e-1632.72Germin-like protein 11-1 OS=Oryza sativa subsp. ja... [more]
GL33_ORYSJ3.168e-1637.06Germin-like protein 3-3 OS=Oryza sativa subsp. jap... [more]
GL35_ORYSJ9.218e-1635.66Germin-like protein 3-5 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-C08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674775 ID=EY674775; Name=EY674775; organism=Citrus sinensis; type=EST; length=1020bp
CCACGCGTCCGCATCAAAATAACTACACCCCTTATTAGTCAAAATGCTTC
ACATTCTCTTCTTCTTCCCCCCTTTCGTATCCTCTTCCTCCAATGCTATG
GTTAACGACTTCTGCGTCGCTGACCTAAAGCTGTCGGATAGTCCCGCCGG
CTATCCTTGCGTGCCCCCCGCTATGGTTACCGCTGACGACTTCGTATTTT
CGGGCCTCGGCGTGGCCGGAAACACCACGAGCATTATCAACGCGGCAGTG
ACACCTGCATTTGTAGCTCAATTTTAGGCCGTGAATGGGCTCGGACTCTC
CTTGGCACGCCTAGATCTTGCAAAGGGTGGCGTAATCCCAATCCACACTC
ATCCAGCTGCTTCCGAAATCCTTCTTGTTGTGCATGGCTGCATAACTGCC
GGGTTCATTTCCTCTTCAGCTAACACTGTTTACGTAAAGACGCTTAAGAA
GGGAGATATCATGATCTTTCCACAAGGGTTGTTTGCATTTTCAAGTAAAT
TCCGGTGCGGACAGAGCCCTCAGTTTTGTTTACTTCAACAGCCCCGAATC
CTGGACTCCAAATCCACCGATTTCGCCTTATTTGCTAACAACTTGTCTTT
CCAATTGGGGGAGCAAAACCCTTTTCCTTGACGAAGCTTACGGGGAAGAA
GGCTCAAGGGTTTCCCTTGGTGGCAACCGGCAAGGGCTTTATTGTTTACC
CCACATTCTTCAATTTGGGAATTTTTTAAATTCTTTAATTTCCTATTAAT
TTGCCAAAGGTTTTTTGAATTGGTTGGGAAATTCCACAAATTTACAAATT
TTTCCTGGTTCCCCCCTTCCCCCTTTCCTTTTCCTCCCCGGAAAAAAAAA
AATAAAATTTCCCCCCCTAAAAAAAAAAAAAAAAAAAGGGGGGGGCGCTC
CCTCCAAAAAAGAAAACACAAAACTTTTAATTGAGTCGCGGCGTGCGTGG
TGGGAAACGTGAATAAAAACCCTCTTCTTTTTATGGAGGGGTATGCGACC
CTCCCAAAAATATTTTTGCT
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