EY674775

Overview
NameEY674775
Unique NameEY674775
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1020
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674775 vs. ExPASy Swiss-Prot
Match: GL36_ORYSJ (Germin-like protein 3-6 OS=Oryza sativa subsp. japonica GN=Os03g0694000 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.204e-15
Identity = 51/143 (35.66%), Postives = 80/143 (55.94%), Query Frame = 2
Query:  101 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAA-VTPAFVAQF*AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS--SANTVYVKTLKKGDIMIFPQGLFAFSSKFRCGQS 517
            + DFCVADL    +  G+ C  PA    D+F+FS  +   G+  +  N + VT   VA++  VN LG+S+ R+D A GG  P H HP A+E+ +V+ G +  G I +  + N  Y K ++ G+  + P+GL  F  +F  G++
Sbjct:   34 LQDFCVADLDSKVTVNGHAC-KPASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHF--QFNVGKT 173          
BLAST of EY674775 vs. ExPASy Swiss-Prot
Match: GL34_ORYSJ (Putative germin-like protein 3-4 OS=Oryza sativa subsp. japonica GN=Os03g0693800 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.054e-15
Identity = 51/143 (35.66%), Postives = 79/143 (55.24%), Query Frame = 2
Query:  101 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAA-VTPAFVAQF*AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISS--SANTVYVKTLKKGDIMIFPQGLFAFSSKFRCGQS 517
            + DFCVADL    +  G+ C  PA    D+F+FS  +   G+  +  N + VT   VA++  VN LG+S+ R+D A GG  P H HP A+E+ +V+ G +  G I +    N  Y K ++ G+  + P+GL  F  +F  G++
Sbjct:   34 LQDFCVADLDSKVTVNGHAC-KPASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDMGNRYYSKVVRAGETFVIPRGLMHF--QFNVGKT 173          
BLAST of EY674775 vs. ExPASy Swiss-Prot
Match: GL31_ORYSJ (Germin-like protein 3-1 OS=Oryza sativa subsp. japonica GN=Os03g0179000 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.054e-15
Identity = 49/136 (36.03%), Postives = 72/136 (52.94%), Query Frame = 2
Query:  107 DFCVADLKLSDSPA-----GYPCVPPAMVTADDFVFSGLGVAGNTTSII---NAAVTPAFVAQF*AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLFAF 490
            D+CVAD   + +       G  C+ PA+  AD F  S L  A N  + +   NA +T    A     N  GL++AR+DLA GG+ P H+HP ASE  LV+ G +  GF  +S   +Y + L+ G+  +FP+ +  F
Sbjct:   29 DYCVADTAAATAAGAFHLNGLACIDPALARADHFATSALSRATNPAATLYGFNATLTSP-AASLPGANAQGLAMARIDLAPGGMAPPHSHPRASEAALVLSGSVLVGFADTSYR-LYTQLLRAGEAFVFPRAMVHF 162          
BLAST of EY674775 vs. ExPASy Swiss-Prot
Match: GL92_ORYSJ (Putative germin-like protein 9-2 OS=Oryza sativa subsp. japonica GN=Os09g0568600 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.331e-14
Identity = 48/125 (38.40%), Postives = 69/125 (55.20%), Query Frame = 2
Query:  167 PAMVTADDFVFSGLGVAGNTTSIINA---AVTPAFVAQF*AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLFAFSSKFRCGQSPQFCL 532
            P  +T D F F+G     NT+S        VT A +A+F A+NG  +S A L      V P HTHP ++E+LLVV G ++ GFI ++ N +Y + L  GD+ +FP+G+  F  +F  G  P   L
Sbjct:   42 PMNITGDFFTFTGFRKVFNTSSAPEPNSFTVTKATMAEFPALNGQSVSYATLVFPPSTVNPPHTHPRSAELLLVVDGALSVGFIDTT-NKLYTQDLAAGDMFVFPKGMVHF--QFNSGNQPAMAL 163          
BLAST of EY674775 vs. ExPASy Swiss-Prot
Match: GL11_ARATH (Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana GN=GLP7 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 8.628e-14
Identity = 47/136 (34.56%), Postives = 69/136 (50.74%), Query Frame = 2
Query:  101 VNDFCVADLKLSDSPA---GYPCVPPAMVTADDFVFSGLGVAGNTTS---IINAAVTPAFVAQF*AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLFAF 490
            + D+CV+    S       G  C  P   +  DF  S L   GNT +   +IN  VT    A    +N +GL++ARLD    GV+P H HP ASE+ + + G +  GF+ +S   V+ + L  G+  +FP+GL  F
Sbjct:   23 LQDYCVSPPPSSHQQIFLNGKLCKDPTQASVSDFSTSALSRPGNTKTKPFMINVTVTTT--ANLPGLNTVGLTMARLDFGGSGVVPPHVHPRASEVTVCLDGVLLVGFVDTSGR-VFTQELHPGETFVFPKGLIHF 155          
BLAST of EY674775 vs. ExPASy Swiss-Prot
Match: GL91_ORYSJ (Germin-like protein 9-1 OS=Oryza sativa subsp. japonica GN=Os09g0568500 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.546e-13
Identity = 42/109 (38.53%), Postives = 61/109 (55.96%), Query Frame = 2
Query:  167 PAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQF*AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAN-TVYVKTLKKGDIMIFPQGLFAF 490
            P+ +    F +  L V GN+       VT A  A+F A+ G  +S A L    G V P H HP ASE+L+VV G +  G + ++ N TVY +TL+ GD+ +FP+G+  F
Sbjct:   42 PSGIDGAFFTYKNL-VTGNSGDPAKLTVTKATHAEFPALLGQSVSYAALVFGAGTVNPPHIHPRASELLVVVQGPLLVGLVDAARNGTVYTQTLQTGDMFVFPKGMVHF 149          

HSP 2 Score: 25.409 bits (54), Expect = 2.546e-13
Identity = 15/35 (42.86%), Postives = 19/35 (54.29%), Query Frame = 3
Query:  468 FHKGCLHFQVNSGAD-RALSFVYFNSPESWTPNPP 569
            F KG +HFQ N+G D  A +F  F S    T + P
Sbjct:  142 FPKGMVHFQFNNGTDVVARAFSAFGSATPGTISLP 176          
BLAST of EY674775 vs. ExPASy Swiss-Prot
Match: GL93_ORYSJ (Germin-like protein 9-3 OS=Oryza sativa subsp. japonica GN=Os09g0568700 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.799e-11
Identity = 44/127 (34.65%), Postives = 68/127 (53.54%), Query Frame = 2
Query:  176 VTADDFVFSGLGVAGNTTSI--------INAAVTPAFVAQF*AVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLFAFSSKFRCGQSPQFCL 532
            +T D F F+G     N  S+         N  VT A +A+F A+NG  +S A L      + P HTHP ++E+LL+V G ++ GF+ ++ N +Y + L  GD+ +FP+G+  F  +F  G  P   L
Sbjct:   43 ITGDFFTFTGFR---NPLSMNMSMPMPNANFTVTKATMAEFPALNGQSVSYAVLMYPPATLNPPHTHPRSAELLLLVDGALSVGFVDTT-NKLYTQDLAAGDMFVFPKGMVHF--QFNSGNQPAMAL 163          
The following BLAST results are available for this feature:
BLAST of EY674775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL36_ORYSJ1.204e-1535.66Germin-like protein 3-6 OS=Oryza sativa subsp. jap... [more]
GL34_ORYSJ2.054e-1535.66Putative germin-like protein 3-4 OS=Oryza sativa s... [more]
GL31_ORYSJ2.054e-1536.03Germin-like protein 3-1 OS=Oryza sativa subsp. jap... [more]
GL92_ORYSJ1.331e-1438.40Putative germin-like protein 9-2 OS=Oryza sativa s... [more]
GL11_ARATH8.628e-1434.56Germin-like protein subfamily 1 member 1 OS=Arabid... [more]
GL91_ORYSJ2.546e-1338.53Germin-like protein 9-1 OS=Oryza sativa subsp. jap... [more]
GL93_ORYSJ1.799e-1134.65Germin-like protein 9-3 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-C08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674775 ID=EY674775; Name=EY674775; organism=Citrus sinensis; type=EST; length=1020bp
CCACGCGTCCGCATCAAAATAACTACACCCCTTATTAGTCAAAATGCTTC
ACATTCTCTTCTTCTTCCCCCCTTTCGTATCCTCTTCCTCCAATGCTATG
GTTAACGACTTCTGCGTCGCTGACCTAAAGCTGTCGGATAGTCCCGCCGG
CTATCCTTGCGTGCCCCCCGCTATGGTTACCGCTGACGACTTCGTATTTT
CGGGCCTCGGCGTGGCCGGAAACACCACGAGCATTATCAACGCGGCAGTG
ACACCTGCATTTGTAGCTCAATTTTAGGCCGTGAATGGGCTCGGACTCTC
CTTGGCACGCCTAGATCTTGCAAAGGGTGGCGTAATCCCAATCCACACTC
ATCCAGCTGCTTCCGAAATCCTTCTTGTTGTGCATGGCTGCATAACTGCC
GGGTTCATTTCCTCTTCAGCTAACACTGTTTACGTAAAGACGCTTAAGAA
GGGAGATATCATGATCTTTCCACAAGGGTTGTTTGCATTTTCAAGTAAAT
TCCGGTGCGGACAGAGCCCTCAGTTTTGTTTACTTCAACAGCCCCGAATC
CTGGACTCCAAATCCACCGATTTCGCCTTATTTGCTAACAACTTGTCTTT
CCAATTGGGGGAGCAAAACCCTTTTCCTTGACGAAGCTTACGGGGAAGAA
GGCTCAAGGGTTTCCCTTGGTGGCAACCGGCAAGGGCTTTATTGTTTACC
CCACATTCTTCAATTTGGGAATTTTTTAAATTCTTTAATTTCCTATTAAT
TTGCCAAAGGTTTTTTGAATTGGTTGGGAAATTCCACAAATTTACAAATT
TTTCCTGGTTCCCCCCTTCCCCCTTTCCTTTTCCTCCCCGGAAAAAAAAA
AATAAAATTTCCCCCCCTAAAAAAAAAAAAAAAAAAAGGGGGGGGCGCTC
CCTCCAAAAAAGAAAACACAAAACTTTTAATTGAGTCGCGGCGTGCGTGG
TGGGAAACGTGAATAAAAACCCTCTTCTTTTTATGGAGGGGTATGCGACC
CTCCCAAAAATATTTTTGCT
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