EY674769

Overview
NameEY674769
Unique NameEY674769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length951
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: TERA1_CAEEL (Transitional endoplasmic reticulum ATPase homolog 1 OS=Caenorhabditis elegans GN=cdc-48.1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.980e-13
Identity = 40/118 (33.90%), Postives = 68/118 (57.63%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFALRV 381
            T +D    R  ++ I ATNRP+ +D    R GR DR + IG+PDA  R++I  +H+   +LA+DV+ E++     GF GAD+ +L +E+ +  +R      ++ +++D+ D Q    V
Sbjct:  336 TLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIR------EKMELIDLEDDQIDAEV 447          

HSP 2 Score: 69.707 bits (169), Expect = 2.789e-11
Identity = 37/100 (37.00%), Postives = 57/100 (57.00%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSK 327
            T +D  + ++ V  I ATNRPD +D   +RPGR+D+ +YI LPD   R QI         L++D++   L   TVGFSGAD+  +   +  +++R+   K
Sbjct:  613 TEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEK 712          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: RIX7_YEAST (Ribosome biogenesis ATPase RIX7 OS=Saccharomyces cerevisiae GN=RIX7 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.980e-13
Identity = 43/115 (37.39%), Postives = 71/115 (61.74%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFD--VHSAGKQLAEDVNFEELV--FRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLD 360
            T +D  + R+ +  I ATNRPD +D   +RPGR+D+ L+I LP+ ++++ I      S G  L+ DV+FEE++   +   FSGAD+  LV ES ++++++     Q ++I  VLD
Sbjct:  659 TELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDFEEIIRNEKCNNFSGADLAALVRESSVLALKR--KFFQSEEIQSVLD 771          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: TERA_XENTR (Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis GN=vcp PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.892e-13
Identity = 39/112 (34.82%), Postives = 67/112 (59.82%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            T +D    R  VI + ATNRP+ +D    R GR DR + IG+PD+  R++I  +H+   +L++DV+ E++   T G  GAD+  L +E+ + ++RK      + D++D+ D+
Sbjct:  330 TLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRK------KMDLIDLEDE 435          

HSP 2 Score: 73.1738 bits (178), Expect = 2.523e-12
Identity = 37/96 (38.54%), Postives = 58/96 (60.42%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRK 315
            T +D  S ++ V  I ATNRPD +D   +RPGR+D+ +YI LPD K R+ I   +     +A+DV+ + L   T GFSGAD+  +   +  +++R+
Sbjct:  606 TEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRE 701          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: TERA_XENLA (Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 3.892e-13
Identity = 39/112 (34.82%), Postives = 67/112 (59.82%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            T +D    R  VI + ATNRP+ +D    R GR DR + IG+PD+  R++I  +H+   +L++DV+ E++   T G  GAD+  L +E+ + ++RK      + D++D+ D+
Sbjct:  330 TLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRK------KMDLIDLEDE 435          

HSP 2 Score: 73.1738 bits (178), Expect = 2.523e-12
Identity = 37/96 (38.54%), Postives = 59/96 (61.46%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRK 315
            T +D  S+++ V  I ATNRPD +D   +RPGR+D+ +YI LPD K R+ I   +     +A+DV+ + L   T GFSGAD+  +   +  +++R+
Sbjct:  606 TEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRE 701          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: SPA5L_HUMAN (Spermatogenesis-associated protein 5-like protein 1 OS=Homo sapiens GN=SPATA5L1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.892e-13
Identity = 37/87 (42.53%), Postives = 56/87 (64.37%), Query Frame = 1
Query:   55 QAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRK 315
            ++V+ I ATNRPD LD   +RPGR+D+ +YI  PD K R+ I  V +    +  DV+ E L   T  FSGAD+RNL  E+ ++++++
Sbjct:  620 RSVMIIAATNRPDVLDTALLRPGRLDKIIYIPPPDHKGRLSILKVCTKTMPIGPDVSLENLAAETCFFSGADLRNLCTEAALLALQE 706          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.892e-13
Identity = 38/103 (36.89%), Postives = 58/103 (56.31%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQD 342
            +D F  R  V  + ATNRPD LD   +RPGR DR + + +P A+ R QI  +H+    LA+DV+  ++   T   SGAD+  +V E+G+ ++R     +   D
Sbjct:  290 MDGFDPRGNVRILAATNRPDILDPALLRPGRFDRMIKVPMPTAEAREQILKIHARKMNLADDVDLRKIALITDESSGADLSAIVMEAGMFAIRNNRDVVDSSD 392          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.892e-13
Identity = 41/110 (37.27%), Postives = 64/110 (58.18%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F  R  V  I ATNRPD LD   +RPGR DR + + LPD + R++I  VH+  K    +V+   +   T G SGAD++ +  E+G+ ++R   + + Q+D +  +DK
Sbjct:  269 MDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFRGRLEILKVHTR-KMNLRNVDLSIIADITEGASGADLKAIATEAGMFAIRDRRTYVTQEDFLKAVDK 377          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PSMR_SULTO (Proteasome-activating nucleotidase OS=Sulfolobus tokodaii GN=pan PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.892e-13
Identity = 38/110 (34.55%), Postives = 63/110 (57.27%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            ID F     V  I ATNR D LD   +RPGR DR + + LP+ + R +IF ++    +   ++ ++ L   T GFSGA+I+N+  E+G +++R G   +   D++  ++K
Sbjct:  265 IDGFKPLDNVKIIAATNRLDILDPALLRPGRFDRLIEVPLPNFEGRKEIFRIYLQKMKTDGNIRYDILASMTEGFSGAEIKNVCTEAGYIAIRNGRKYVNMTDLITAIEK 374          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH5_ORYSJ (Cell division protease ftsH homolog 5, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH5 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.892e-13
Identity = 39/110 (35.45%), Postives = 59/110 (53.64%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F   + +I I ATN P+ LD   VRPGR DR + +  PD + R QI + H +    ++DV+   +   T GFSGAD+ NLVN + + +   G   +   D+    D+
Sbjct:  357 LDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMSKVLKSDDVDLMIIARGTPGFSGADLANLVNVAALKAAMDGAKAVTMNDLEYAKDR 466          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: CDCH_HALSA (Protein cdcH OS=Halobacterium salinarium GN=cdcH PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.892e-13
Identity = 41/96 (42.71%), Postives = 56/96 (58.33%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRK 315
            T +D    R  VI I ATNR D +D    RPGR DR + IG+PD   R +I  +H+ G  L++DVN   L   T GF GADI +L  E+ + ++R+
Sbjct:  315 TMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIGREEILKIHTRGMPLSDDVNLSTLADDTHGFVGADIESLSKEAAMRALRR 410          

HSP 2 Score: 72.0182 bits (175), Expect = 5.620e-12
Identity = 36/95 (37.89%), Postives = 54/95 (56.84%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVR 312
            T +D     + V+ I ATNRPD +D   +R GR DR + +G P  + R QI  +H+    LA DV+  EL  R  G+ G+D+ N+  E+ I ++R
Sbjct:  589 TELDGLEEMEEVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEGREQILKIHTQDTPLAADVSLRELAERADGYVGSDLANIAREAAIEALR 683          
The following BLAST results are available for this feature:
BLAST of EY674769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
TERA1_CAEEL2.980e-1333.90Transitional endoplasmic reticulum ATPase homolog ... [more]
RIX7_YEAST2.980e-1337.39Ribosome biogenesis ATPase RIX7 OS=Saccharomyces c... [more]
TERA_XENTR3.892e-1334.82Transitional endoplasmic reticulum ATPase OS=Xenop... [more]
TERA_XENLA3.892e-1334.82Transitional endoplasmic reticulum ATPase OS=Xenop... [more]
SPA5L_HUMAN3.892e-1342.53Spermatogenesis-associated protein 5-like protein ... [more]
PSMR_UNCMA3.892e-1336.89Proteasome-activating nucleotidase OS=Uncultured m... [more]
PSMR_THEGJ3.892e-1337.27Proteasome-activating nucleotidase OS=Thermococcus... [more]
PSMR_SULTO3.892e-1334.55Proteasome-activating nucleotidase OS=Sulfolobus t... [more]
FTSH5_ORYSJ3.892e-1335.45Cell division protease ftsH homolog 5, mitochondri... [more]
CDCH_HALSA3.892e-1342.71Protein cdcH OS=Halobacterium salinarium GN=cdcH P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-C01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674769 ID=EY674769; Name=EY674769; organism=Citrus sinensis; type=EST; length=951bp
CTTACCATCCCATGTACCAAGGAAAGAACTGGTATTGATCGGTTTTCACT
TAGACAAGCTGTCATATTCATCTGCGCTACCAATAGGCCAGATGAATTGG
ACCTTGAGTTTGTCCGCCCTGGACGTATTGACCGCCGTTTATACATTGGT
TTGCCTGATGCAAAGCAACGAGTGCAAATATTTGATGTGCACAGTGCAGG
AAAGCAACTTGCAGAAGATGTAAACTTTGAAGAGCTTGTCTTCCGTACAG
TTGGTTTTTCTGGGGCAGATATTAGAAATCTTGTGAATGAATCAGGAATA
ATGTCGGTGAGAAAAGGACATTCCAAAATCCAGCAACAAGACATCGTTGA
TGTGCTAGATAAACAATTTGCTTTGAGGGTATGGGTGTACCTTCTTACAG
AAGAAGAGCAACCAGAAATGTGAACAAAGTGTTTTCTTTTGAAAAAAAAA
AGGCTCTTGGGCTTGGTACATGGAAGCTGGGGCCCTTAGAATTAGCTCCA
CCTTTTTTCCTCGATTTGATTTGGCATGCATTTTCTCAAGCTCCCAACCT
GGGGGCAAGGGAAACTGGCAAAATTCTGTGGTTTTTTCCCTCGTGAAGAA
CACAAAAAATCAAGGGTTAAACAACCTTTTGGCTACTAGAAAAATGCAAA
TGGGAGGGGGGCCATGGGGGGACAAAGGGGCGGAACGACTTTGTGTGTGG
GCAAATATGTAAACTGAAGGAAAGGAAGGGAGGCCACTTAGAAAAAAAAA
TTAAAATTTGGCTAGGGAAATAGGGGGTATTTTCCCACCAAAAAGGCAGG
TGTGGGGGGGTTAGGCGGTTTTTACAAAAAAAGAATTTGAGATTTTTTGG
AGTATAACACAAAAAAGTACAGAAATGGGGTTGTTATTTGAAAAAATAAT
AAGGGGGGATATCTCTCTTCTTGACACCTACCCCCCAATTTTTTTTACAT
T
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