EY674769

Overview
NameEY674769
Unique NameEY674769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length951
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: AFG2_SCHPO (ATPase family gene 2 protein OS=Schizosaccharomyces pombe GN=afg2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.295e-12
Identity = 36/104 (34.62%), Postives = 64/104 (61.54%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDI 345
            +D     + V+ + ATNRPD +D   +RPGR+DR LY+G P+ + R QI  + +   + AEDV+ + +  +T G SGA++  L  E+G++++   H  ++ ++I
Sbjct:  674 LDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFAEDVDLDLIAEKTEGCSGAEVVALCQEAGLIAM---HEDLEAKEI 774          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: SPAT5_HUMAN (Spermatogenesis-associated protein 5 OS=Homo sapiens GN=SPATA5 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 4.303e-12
Identity = 34/96 (35.42%), Postives = 59/96 (61.46%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRK 315
            T +D     + V  + ATNRPD +D   +RPGRIDR +Y+ LPDA  R +IF +      ++ +V+ +EL+ +T  +SGA+I  +  E+ ++++ +
Sbjct:  755 TEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELILQTDAYSGAEIVAVCREAALLALEE 850          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS6A_MOUSE (26S protease regulatory subunit 6A OS=Mus musculus GN=Psmc3 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.303e-12
Identity = 36/103 (34.95%), Postives = 62/103 (60.19%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQD 342
            +D F     V  I ATNR D LD   +R GR+DR++   +P+ + R +I  +HS    ++ DVN+EEL   T  F+GA  + +  E+G++++R+G +++  +D
Sbjct:  320 LDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQSKAVCVEAGMIALRRGATELTHED 422          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: YB7A_SCHPO (Uncharacterized AAA domain-containing protein C16E9.10c OS=Schizosaccharomyces pombe GN=SPBC16E9.10c PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.620e-12
Identity = 41/97 (42.27%), Postives = 57/97 (58.76%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEEL--VFRTVGFSGADIRNLVNESGIMSVR 312
            T +D  S R  V  I ATNRPD +D   +RPGR+D+ L + LPDA +RV+I    +    L E+VN + L    R   FSGAD+  LV E+ + ++R
Sbjct:  618 TELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLHEEVNLDVLGRDERCSNFSGADLAALVREAAVTALR 714          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: SPA5L_BOVIN (Spermatogenesis-associated protein 5-like protein 1 OS=Bos taurus GN=SPATA5L1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.620e-12
Identity = 35/85 (41.18%), Postives = 54/85 (63.53%), Query Frame = 1
Query:   61 VIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRK 315
            VI + ATNRPD LD   +RPGR+D+ +YI  PD K R+ I  V +    +  DV+ E++   T  FSGAD+ NL  E+ ++++++
Sbjct:  636 VIVVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNTPMGPDVSLEKVAAETCFFSGADLGNLCKEAALLALQE 720          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSHA_ARATH (Cell division protease ftsH homolog 10, mitochondrial OS=Arabidopsis thaliana GN=FTSH10 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.620e-12
Identity = 38/112 (33.93%), Postives = 61/112 (54.46%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNF--EELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F     V+ +  TNRPD LD   +RPGR DR++ I  PD K R QIF ++    +L  + ++  + L   T GF+GADI N+ NE+ +++ R   + +        +D+
Sbjct:  458 MDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAHFDSAIDR 569          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH3_ARATH (Cell division protease ftsH homolog 3, mitochondrial OS=Arabidopsis thaliana GN=FTSH3 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.620e-12
Identity = 38/112 (33.93%), Postives = 61/112 (54.46%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNF--EELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F     V+ +  TNRPD LD   +RPGR DR++ I  PD K R QIF ++    +L  + ++  + L   T GF+GADI N+ NE+ +++ R   + +        +D+
Sbjct:  452 MDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFKIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAHFESAIDR 563          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: CDC48_SOYBN (Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.620e-12
Identity = 38/112 (33.93%), Postives = 64/112 (57.14%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            T +D    R  VI I ATNRP+ +D    R GR DR + IG+PD   R+++  +H+   +L++DV+ E +   T G+ GAD+  L  E+ +  +R      ++ D++D+ D+
Sbjct:  334 TLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIR------EKMDVIDLEDE 439          

HSP 2 Score: 72.0182 bits (175), Expect = 5.620e-12
Identity = 39/100 (39.00%), Postives = 56/100 (56.00%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSK 327
            T +D  S ++ V  I ATNRPD +D   +RPGR+D+ +YI LPD   R QIF        +A++V+   L   T GFSGADI  +   +   ++R+   K
Sbjct:  610 TEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPIAKNVDLRALARHTQGFSGADITEICQRACKYAIRENIEK 709          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PSMR_THEON (Proteasome-activating nucleotidase OS=Thermococcus onnurineus (strain NA1) GN=pan PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.339e-12
Identity = 38/110 (34.55%), Postives = 62/110 (56.36%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F     V  I ATNRPD LD   +RPGR DR + + LP+ K R++I  +H+    L + V+   +   T G SGAD++ +  E+G+ ++R     + Q+D +  ++K
Sbjct:  270 MDGFDPSGNVKIIAATNRPDILDPALLRPGRFDRLIEVPLPNFKSRLEILKIHTKRMNL-KGVDLRIIAEMTEGASGADLKAITMEAGMFAIRDRREYVTQEDFLKAIEK 378          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: PRS6B_ENCCU (26S protease regulatory subunit 6B homolog OS=Encephalitozoon cuniculi GN=ECU08_1970 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.339e-12
Identity = 38/110 (34.55%), Postives = 61/110 (55.45%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F     V  I ATNR D +D   +RPGR+DR++   LPD +Q+  +F+  ++   L + V+ E LV R    S ADI ++  E+G+++VR     + Q+D  +   K
Sbjct:  265 MDGFDPAANVKVIMATNRADTIDPALLRPGRLDRKIEFPLPDRRQKRLVFNAITSKMSLNDSVDIESLVCRPEKISCADINSICQEAGMLAVRASRYMVTQRDFEEAYSK 374          
The following BLAST results are available for this feature:
BLAST of EY674769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
AFG2_SCHPO3.295e-1234.62ATPase family gene 2 protein OS=Schizosaccharomyce... [more]
SPAT5_HUMAN4.303e-1235.42Spermatogenesis-associated protein 5 OS=Homo sapie... [more]
PRS6A_MOUSE4.303e-1234.9526S protease regulatory subunit 6A OS=Mus musculus... [more]
YB7A_SCHPO5.620e-1242.27Uncharacterized AAA domain-containing protein C16E... [more]
SPA5L_BOVIN5.620e-1241.18Spermatogenesis-associated protein 5-like protein ... [more]
FTSHA_ARATH5.620e-1233.93Cell division protease ftsH homolog 10, mitochondr... [more]
FTSH3_ARATH5.620e-1233.93Cell division protease ftsH homolog 3, mitochondri... [more]
CDC48_SOYBN5.620e-1233.93Cell division cycle protein 48 homolog OS=Glycine ... [more]
PSMR_THEON7.339e-1234.55Proteasome-activating nucleotidase OS=Thermococcus... [more]
PRS6B_ENCCU7.339e-1234.5526S protease regulatory subunit 6B homolog OS=Ence... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-C01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674769 ID=EY674769; Name=EY674769; organism=Citrus sinensis; type=EST; length=951bp
CTTACCATCCCATGTACCAAGGAAAGAACTGGTATTGATCGGTTTTCACT
TAGACAAGCTGTCATATTCATCTGCGCTACCAATAGGCCAGATGAATTGG
ACCTTGAGTTTGTCCGCCCTGGACGTATTGACCGCCGTTTATACATTGGT
TTGCCTGATGCAAAGCAACGAGTGCAAATATTTGATGTGCACAGTGCAGG
AAAGCAACTTGCAGAAGATGTAAACTTTGAAGAGCTTGTCTTCCGTACAG
TTGGTTTTTCTGGGGCAGATATTAGAAATCTTGTGAATGAATCAGGAATA
ATGTCGGTGAGAAAAGGACATTCCAAAATCCAGCAACAAGACATCGTTGA
TGTGCTAGATAAACAATTTGCTTTGAGGGTATGGGTGTACCTTCTTACAG
AAGAAGAGCAACCAGAAATGTGAACAAAGTGTTTTCTTTTGAAAAAAAAA
AGGCTCTTGGGCTTGGTACATGGAAGCTGGGGCCCTTAGAATTAGCTCCA
CCTTTTTTCCTCGATTTGATTTGGCATGCATTTTCTCAAGCTCCCAACCT
GGGGGCAAGGGAAACTGGCAAAATTCTGTGGTTTTTTCCCTCGTGAAGAA
CACAAAAAATCAAGGGTTAAACAACCTTTTGGCTACTAGAAAAATGCAAA
TGGGAGGGGGGCCATGGGGGGACAAAGGGGCGGAACGACTTTGTGTGTGG
GCAAATATGTAAACTGAAGGAAAGGAAGGGAGGCCACTTAGAAAAAAAAA
TTAAAATTTGGCTAGGGAAATAGGGGGTATTTTCCCACCAAAAAGGCAGG
TGTGGGGGGGTTAGGCGGTTTTTACAAAAAAAGAATTTGAGATTTTTTGG
AGTATAACACAAAAAAGTACAGAAATGGGGTTGTTATTTGAAAAAATAAT
AAGGGGGGATATCTCTCTTCTTGACACCTACCCCCCAATTTTTTTTACAT
T
back to top