EY674769

Overview
NameEY674769
Unique NameEY674769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length951
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_ODOSI (Cell division protease ftsH homolog OS=Odontella sinensis GN=ftsH PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.746e-19
Identity = 49/112 (43.75%), Postives = 69/112 (61.61%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            T +D F   + VI + ATNR D LD   +RPGR DR++ + LPD   RV I  VH+  K L EDV+  +L  RT GFSGAD+ NL+NE+ I++ R   S I + ++ +  D+
Sbjct:  314 TEMDGFKENKGVIVVGATNRADILDAALLRPGRFDRQVTVNLPDRLGRVGILKVHARNKPLGEDVSLVQLANRTPGFSGADLANLLNEAAILATRYKKSSITKNEVNEAADR 425          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_STRR6 (Cell division protease ftsH homolog OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=ftsH PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.804e-18
Identity = 47/113 (41.59%), Postives = 69/113 (61.06%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFA 372
            +D F   + +I I ATNR D LD   +RPGR DR++ +G PD K R  I  VH+  K LAEDV+ + +  +T GF GAD+ N++NE+ +++ R+  S I   DI +  D+  A
Sbjct:  317 MDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDEAEDRVIA 429          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_STRPN (Cell division protease ftsH homolog OS=Streptococcus pneumoniae GN=ftsH PE=3 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 1.804e-18
Identity = 47/113 (41.59%), Postives = 69/113 (61.06%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFA 372
            +D F   + +I I ATNR D LD   +RPGR DR++ +G PD K R  I  VH+  K LAEDV+ + +  +T GF GAD+ N++NE+ +++ R+  S I   DI +  D+  A
Sbjct:  317 MDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDEAEDRVIA 429          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_MYCPU (Cell division protease ftsH homolog OS=Mycoplasma pulmonis GN=ftsH PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.804e-18
Identity = 43/113 (38.05%), Postives = 73/113 (64.60%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFA 372
            +D  +    ++ + ATNR D LD   +RPGR DR + +GLPD K+R +I  +HS GK+L++++ F+++  RT G+SGA + N++NE+ ++SVR+    I    I + +D+  A
Sbjct:  342 MDGINENAGILIMGATNRTDVLDPALLRPGRFDRIITVGLPDIKEREEILKLHSKGKRLSKEIKFDKIAKRTPGYSGAQLENVINEASLLSVREKTDVIISTQIDEAIDRVMA 454          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_MYCPN (Cell division protease ftsH homolog OS=Mycoplasma pneumoniae GN=ftsH PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.804e-18
Identity = 45/113 (39.82%), Postives = 69/113 (61.06%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFA 372
            +D F+ R  V+ + ATNR D LD   +RPGR DR + I LPD K+R  I  VH+  K L+  ++  ++  RT GFSGA + N++NE+ +++VR   + I   DI + +D+  A
Sbjct:  358 MDGFTSRTGVVVMAATNRLDVLDDALLRPGRFDRHIQINLPDIKEREGILQVHAKNKNLSSKISLLDVAKRTPGFSGAQLENVINEATLLAVRDNRTTINMNDIDEAIDRVIA 470          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH2_SYNY3 (Cell division protease ftsH homolog 2 OS=Synechocystis sp. (strain PCC 6803) GN=slr1390 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.076e-18
Identity = 45/115 (39.13%), Postives = 68/115 (59.13%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFA 372
            T +D F     +I I ATNRPD LDL  +RPGR DR++ +  PD + R  I  +H+  K+L E+V    +  RT GF+GAD+ N++NE+ I + R+    I   ++ D +D+  A
Sbjct:  339 TEMDGFEGNSGIIVIAATNRPDVLDLALLRPGRFDRQVTVDYPDVQGRELILAIHAQNKKLHEEVQLAAIARRTPGFTGADLANVLNEAAIFTARRRKEAITMAEVNDAIDRVVA 453          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_MYCGE (Cell division protease ftsH homolog OS=Mycoplasma genitalium GN=ftsH PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.248e-18
Identity = 45/113 (39.82%), Postives = 69/113 (61.06%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFA 372
            +D F+ R  V+ + ATNR D LD   +RPGR DR + I LPD K+R  I  VH+  K L+  ++  ++  RT GFSGA + N++NE+ +++VR   + I   DI + +D+  A
Sbjct:  361 MDGFTSRTGVVVMAATNRLDVLDDALLRPGRFDRHIQINLPDIKEREGILKVHAENKNLSSKISLLDVAKRTPGFSGAQLENVINEATLLAVRDNRTTININDIDEAIDRVIA 473          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_GUITH (Cell division protease ftsH homolog OS=Guillardia theta GN=ftsH PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.854e-18
Identity = 46/115 (40.00%), Postives = 71/115 (61.74%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFA 372
            T +D F     +I I ATNR D LD   +RPGR DR++ + +PD K R++I +VH+  K+L   ++ E +  RT GFSGAD+ NL+NE+ I++ R+   +I   +I   +D+  A
Sbjct:  301 TEMDGFEGNTGIIIIAATNRVDVLDAALLRPGRFDRQVTVDVPDVKGRLEILNVHARNKKLDLSISLELIAKRTPGFSGADLANLLNEAAILTARRRKKQITISEIDASIDRVIA 415          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_PORPU (Cell division protease ftsH homolog OS=Porphyra purpurea GN=ftsH PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.169e-17
Identity = 46/115 (40.00%), Postives = 70/115 (60.87%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFA 372
            T +D F     VI I ATNR D LD   +RPGR DR++ + +PD + R+ I +VH+  K++   V+ E +  RT GFSGAD+ NL+NE+ I++ R+  S +   +I   +D+  A
Sbjct:  301 TEMDGFEGNTGVIVIAATNRADILDSALLRPGRFDRQVSVDVPDFRGRLAILEVHAKNKKMESKVSLETIARRTPGFSGADLANLLNEAAILTARRRKSAMTMSEIDTSIDRVVA 415          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_HELPY (Cell division protease ftsH homolog OS=Helicobacter pylori GN=ftsH PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.169e-17
Identity = 44/114 (38.60%), Postives = 71/114 (62.28%), Query Frame = 1
Query:   34 IDRFSLRQA-VIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFA 372
            +D F    A VI + ATNRP+ LD   +RPGR DR++ +  PD   RV+I  VH  G +LA DVN +E+   T G +GAD+ N++NE+ +++ R    +++QQ + + +++  A
Sbjct:  301 MDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQKEVRQQHLKEAVERGIA 414          
The following BLAST results are available for this feature:
BLAST of EY674769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
FTSH_ODOSI4.746e-1943.75Cell division protease ftsH homolog OS=Odontella s... [more]
FTSH_STRR61.804e-1841.59Cell division protease ftsH homolog OS=Streptococc... [more]
FTSH_STRPN1.804e-1841.59Cell division protease ftsH homolog OS=Streptococc... [more]
FTSH_MYCPU1.804e-1838.05Cell division protease ftsH homolog OS=Mycoplasma ... [more]
FTSH_MYCPN1.804e-1839.82Cell division protease ftsH homolog OS=Mycoplasma ... [more]
FTSH2_SYNY33.076e-1839.13Cell division protease ftsH homolog 2 OS=Synechocy... [more]
FTSH_MYCGE5.248e-1839.82Cell division protease ftsH homolog OS=Mycoplasma ... [more]
FTSH_GUITH6.854e-1840.00Cell division protease ftsH homolog OS=Guillardia ... [more]
FTSH_PORPU1.169e-1740.00Cell division protease ftsH homolog OS=Porphyra pu... [more]
FTSH_HELPY1.169e-1738.60Cell division protease ftsH homolog OS=Helicobacte... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-C01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674769 ID=EY674769; Name=EY674769; organism=Citrus sinensis; type=EST; length=951bp
CTTACCATCCCATGTACCAAGGAAAGAACTGGTATTGATCGGTTTTCACT
TAGACAAGCTGTCATATTCATCTGCGCTACCAATAGGCCAGATGAATTGG
ACCTTGAGTTTGTCCGCCCTGGACGTATTGACCGCCGTTTATACATTGGT
TTGCCTGATGCAAAGCAACGAGTGCAAATATTTGATGTGCACAGTGCAGG
AAAGCAACTTGCAGAAGATGTAAACTTTGAAGAGCTTGTCTTCCGTACAG
TTGGTTTTTCTGGGGCAGATATTAGAAATCTTGTGAATGAATCAGGAATA
ATGTCGGTGAGAAAAGGACATTCCAAAATCCAGCAACAAGACATCGTTGA
TGTGCTAGATAAACAATTTGCTTTGAGGGTATGGGTGTACCTTCTTACAG
AAGAAGAGCAACCAGAAATGTGAACAAAGTGTTTTCTTTTGAAAAAAAAA
AGGCTCTTGGGCTTGGTACATGGAAGCTGGGGCCCTTAGAATTAGCTCCA
CCTTTTTTCCTCGATTTGATTTGGCATGCATTTTCTCAAGCTCCCAACCT
GGGGGCAAGGGAAACTGGCAAAATTCTGTGGTTTTTTCCCTCGTGAAGAA
CACAAAAAATCAAGGGTTAAACAACCTTTTGGCTACTAGAAAAATGCAAA
TGGGAGGGGGGCCATGGGGGGACAAAGGGGCGGAACGACTTTGTGTGTGG
GCAAATATGTAAACTGAAGGAAAGGAAGGGAGGCCACTTAGAAAAAAAAA
TTAAAATTTGGCTAGGGAAATAGGGGGTATTTTCCCACCAAAAAGGCAGG
TGTGGGGGGGTTAGGCGGTTTTTACAAAAAAAGAATTTGAGATTTTTTGG
AGTATAACACAAAAAAGTACAGAAATGGGGTTGTTATTTGAAAAAATAAT
AAGGGGGGATATCTCTCTTCTTGACACCTACCCCCCAATTTTTTTTACAT
T
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