EY680348

Overview
NameEY680348
Unique NameEY680348
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY680348 vs. ExPASy Swiss-Prot
Match: NFU1_DROVI (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila virilis GN=GJ19011 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.629e-11
Identity = 39/110 (35.45%), Postives = 62/110 (56.36%), Query Frame = 1 
Query:  439 TAENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLVEKIPEIVAVESVADEETGFELNEEKKKRELGESGPILVGEQGGLLEIGG 765
            T   I+ +LD  IRP +  DGG++     +  +V+LK+QG+C SCPSS++T+K G++  L   IPE+ +VE V D+      N+E ++ E        V +    + IGG
Sbjct:  186 TVMMIKELLDTRIRPTVQEDGGDIVFMGYENGIVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQVFDDADKM-ANKEFERFEKSLMQKESVNQPNAPVNIGG 294
The following BLAST results are available for this feature:
BLAST of EY680348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
NFU1_DROVI6.629e-1135.45NFU1 iron-sulfur cluster scaffold homolog, mitocho... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-010-B04-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680348 ID=EY680348; Name=EY680348; organism=Citrus sinensis; type=EST; length=832bp
AAAGCGCGCAAAAAAAAAAAAAAAAAGACAACAAAGACTGCGCCAACCGC
CCGCGACCCCGCGTAACGAAAGCAAAATAAAACAGAAACACAGATCGATT
CAATTAATCGTTAAACCATCAATTTTTATCAAATCGAATCCCCTGAAAGG
AAAAAAAAAAAAGTATACACCCGAAGAAATACAAAGAGAAAGATGCAAGG
CGTTGTGTTGAACCCAACTTACAGTCGCCCTCACCAAACCCTAGACTCTC
CTTCTTGTTCTCGTCCTGCCTCTAAGAGTACTAAAAGTTTCTTTGGAGAA
CGAGTTTCGCTTACGAGGTGGCGGAATCCGGTGCGTCACAGCTCGTGTCG
GTTACTGCTGATTCGGAAGCGTGGGGCCGCGCGAAGGAACGTCATAAAGG
CTGTGGCTACTCCTGATTCAGCTATTGAGTTACCTTTAACTGCTGAGAAT
ATTGAAAGTGTATTGGATGAAATTCGACCATATCTTATATCAGATGGGGG
AAATGTGGCATTACATGAGATTGATGGCAATGTTGTACGATTGAAGCTAC
AGGGAGCATGTGGGTCTTGTCCCAGTTCTGTTATGACGATGAAGATGGGT
ATTGAGCGTCGCTTAGTGGAGAAGATCCCCGAGATAGTTGCAGTGGAATC
GGTAGCAGATGAAGAAACTGGGTTTGAACTGAATGAAGAAAAAAAAAAAA
GGGAATTGGGGGAATCGGGCCCTATCTTGGTGGGGGAGCAGGGTGGATTA
CTTGAAATTGGGGGCAATTGAAGAACCCAAAAATAAAAGTCCAAATTTAG
GGCCCGGCACCGGGGATCAGGAATGTTCCGGG
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