EY674156

Overview
NameEY674156
Unique NameEY674156
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1034
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674156 vs. ExPASy Swiss-Prot
Match: KTNB1_XENLA (Katanin p80 WD40-containing subunit B1 OS=Xenopus laevis GN=katnb1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.838e-12
Identity = 39/124 (31.45%), Postives = 68/124 (54.84%), Query Frame = 1
Query:  157 LAAGGLDAVANIWDIRAGRQMHKFLGHTKWIRSIRMDRDT--VITGSDDWTARMWSIARGTCDAVLACHAGPVQCVEYSSSDRGIITGSSDGLLRFWENDDGG-IKCVKNVTIHSSAILSINAG 519
            +A+G LD    +WD+R    + ++ GHT+ +R +R   D   + + SDD + ++W +  G   A L+ H GPV  +E+  ++  + +GS+D  +RFW+ +    + C +  TI   AIL  N G
Sbjct:  120 VASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGSADRTVRFWDLEKFQLVGCTEGETIPVRAILFSNDG 243          
BLAST of EY674156 vs. ExPASy Swiss-Prot
Match: WDR69_RAT (WD repeat-containing protein 69 OS=Rattus norvegicus GN=Wdr69 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.707e-12
Identity = 40/130 (30.77%), Postives = 63/130 (48.46%), Query Frame = 1
Query:  121 VLCMEYDDSTGILAAGGLDAVANIWDIRAGRQMHKFLGHTKWIRSIRMDR--DTVITGSDDWTARMWSIARGTCDAVLACHAGPVQCVEYSSSDRGIITGSSDGLLRFWENDDGGIKCVKNVTIHSSAIL 504
            ++C+ ++  + ++A G +D  A +WDI++G ++    GH   I S+  D   D +ITGS D T  +W  + G     L  H   +    +S     I+TGS D     W+   G  KCV  +T H   IL
Sbjct:  180 IVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSG--KCVATLTGHDDEIL 307          
BLAST of EY674156 vs. ExPASy Swiss-Prot
Match: KTNB1_XENTR (Katanin p80 WD40-containing subunit B1 OS=Xenopus tropicalis GN=katnb1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.841e-12
Identity = 40/136 (29.41%), Postives = 72/136 (52.94%), Query Frame = 1
Query:  121 VLCMEYDDSTGILAAGGLDAVANIWDIRAGRQMHKFLGHTKWIRSIRMDRDT--VITGSDDWTARMWSIARGTCDAVLACHAGPVQCVEYSSSDRGIITGSSDGLLRFWENDDGG-IKCVKNVTIHSSAILSINAG 519
            V  +++      +A+G LD    +WD+R    + ++ GHT+ +R +R   D   + + SDD + ++W +  G   A L+ H GPV  +E+  ++  + +GS+D  +RFW+ +    I C +  TI   AIL  + G
Sbjct:  108 VCSLDFHPYGDFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGSADRTVRFWDLEKFQLIGCTEGETIPVRAILFSSDG 243          
BLAST of EY674156 vs. ExPASy Swiss-Prot
Match: WDS_DROME (Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.323e-12
Identity = 40/158 (25.32%), Postives = 76/158 (48.10%), Query Frame = 1
Query:  121 VLCMEYDDSTGILAAGGLDAVANIWDIRAGRQMHKFLGHTKWIRSIRMDRD--TVITGSDDWTARMWSIARGTC-DAVLACHAGPVQCVEYSSSDRGIITGSSDGLLRFWENDDGGIKCVKNVTIHSSAILSINA-----GDHWLGIGAADNSMSLFH 570
            V C  ++  + ++ +G  D    IWD+R G+ +     H+  + ++  +RD   +++ S D   R+W  A G C   ++     PV  V++S + + I+  + D  L+ W+   G  KC+K  T H +    I A     G  W+  G+ DN + +++
Sbjct:  159 VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG--KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWN 314          
BLAST of EY674156 vs. ExPASy Swiss-Prot
Match: WDR69_XENTR (WD repeat-containing protein 69 OS=Xenopus tropicalis GN=wdr69 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.323e-12
Identity = 38/132 (28.79%), Postives = 66/132 (50.00%), Query Frame = 1
Query:  121 VLCMEYDDSTGILAAGGLDAVANIWDIRAGRQMHKFLGHTKWIRSIRMDR--DTVITGSDDWTARMWSIARGTCDAVLACHAGPVQCVEYSSSDRGIITGSSDGLLRFWENDDGGIKCVKNVTIHSSAILSI 510
            ++C+ ++  + ++A G +D  A +WDI++G +     GH   I S+  +   D +ITGS D T  +W I  G     L  H G +   +++     I T S D   + W++ +G  KCV  +T H   +L +
Sbjct:  180 IVCLAFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQFNWDCSLIATASMDKSCKLWDSLNG--KCVATLTGHEDEVLDV 309          

HSP 2 Score: 68.9366 bits (167), Expect = 5.353e-11
Identity = 41/162 (25.31%), Postives = 76/162 (46.91%), Query Frame = 1
Query:  118 PVLCMEYDDSTGILAAGGLDAVANIWDIRAGRQMHKFLGHTKWIRSIRMDR---DTVITGSDDWTARMWSIARGTCDAVLACHAGPVQCVEYSSSDRGIITGSSDGLLRFWENDDGGIKCVKNVTIHSSAILSIN---AGDHWLGIGAADNSMSLFHRPQER 585
            P+  + ++ S      G  D    +WD  +G ++H   GH   + +I+ +    D + TGS D T ++WS   G C      H   + C+ ++     I TGS D   + W+   G  +    ++ H++ I+S++    GD  L  G+ D+++S++  P  R
Sbjct:   94 PLTNVAFNKSGSSFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIQFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLAFNPQSTLIATGSMDTTAKLWDIQSG--EEALTLSGHAAEIISLSFNTTGDR-LITGSFDHTVSVWEIPSGR 252          
BLAST of EY674156 vs. ExPASy Swiss-Prot
Match: WDR69_XENLA (WD repeat-containing protein 69 OS=Xenopus laevis GN=wdr69 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.258e-12
Identity = 38/132 (28.79%), Postives = 66/132 (50.00%), Query Frame = 1
Query:  121 VLCMEYDDSTGILAAGGLDAVANIWDIRAGRQMHKFLGHTKWIRSIRMDR--DTVITGSDDWTARMWSIARGTCDAVLACHAGPVQCVEYSSSDRGIITGSSDGLLRFWENDDGGIKCVKNVTIHSSAILSI 510
            ++C+ ++  + ++A G +D  A +WDI++G +     GH   I S+  +   D +ITGS D T  +W I  G     L  H G +   +++     I T S D   + W++ +G  KCV  +T H   +L +
Sbjct:  180 IVCLVFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQFNWDCSLIATASMDKSCKLWDSLNG--KCVATLTGHDDEVLDV 309          

HSP 2 Score: 68.5514 bits (166), Expect = 6.991e-11
Identity = 41/162 (25.31%), Postives = 76/162 (46.91%), Query Frame = 1
Query:  118 PVLCMEYDDSTGILAAGGLDAVANIWDIRAGRQMHKFLGHTKWIRSIRMDR---DTVITGSDDWTARMWSIARGTCDAVLACHAGPVQCVEYSSSDRGIITGSSDGLLRFWENDDGGIKCVKNVTIHSSAILSIN---AGDHWLGIGAADNSMSLFHRPQER 585
            P+  + ++ S      G  D    +WD  +G ++H   GH   + +I+ +    D + TGS D T ++WS   G C      H   + C+ ++     I TGS D   + W+   G  +    ++ H++ I+S++    GD  L  G+ D+++S++  P  R
Sbjct:   94 PLTNVAFNKSGSSFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIQFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLVFNPQSTLIATGSMDTTAKLWDIQSG--EEALTLSGHAAEIISLSFNTTGDR-LITGSFDHTVSVWEIPSGR 252          
BLAST of EY674156 vs. ExPASy Swiss-Prot
Match: WDR5_XENTR (WD repeat-containing protein 5 OS=Xenopus tropicalis GN=wdr5 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.258e-12
Identity = 39/158 (24.68%), Postives = 76/158 (48.10%), Query Frame = 1
Query:  121 VLCMEYDDSTGILAAGGLDAVANIWDIRAGRQMHKFLGHTKWIRSIRMDRD--TVITGSDDWTARMWSIARGTC-DAVLACHAGPVQCVEYSSSDRGIITGSSDGLLRFWENDDGGIKCVKNVTIHSSAILSINA-----GDHWLGIGAADNSMSLFH 570
            V C  ++  + ++ +G  D    IWD++ G+ +     H+  + ++  +RD   +++ S D   R+W  A G C   ++     PV  V++S + + I+  + D  L+ W+   G  KC+K  T H +    I A     G  W+  G+ DN + +++
Sbjct:  132 VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG--KCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287          
BLAST of EY674156 vs. ExPASy Swiss-Prot
Match: WDR5B_HUMAN (WD repeat-containing protein 5B OS=Homo sapiens GN=WDR5B PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.079e-11
Identity = 38/147 (25.85%), Postives = 76/147 (51.70%), Query Frame = 1
Query:  142 DSTGILAAGGLDAVANIWDIRAGRQMHKFLGHTKWIRSIRMD--RDTVITGSDDWTARMWSIARGTCDAVLACHAGPVQCVEYSSSDRGIITGSSDGLLRFWENDDGGIKCVKNVTIHSS---AILSINAGDHWLGIGAADNSMSLF 567
            DS+ +++A   D    +WD+R+G+ +    GH+ ++     +   + +I+GS D T ++W +  G C   L+ H+ PV  V ++ S   I++GS DGL R W+   G  +C+K +    +   + +  +    ++     DN++ L+
Sbjct:   94 DSSRLVSASD-DKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASG--QCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLW 237          
BLAST of EY674156 vs. ExPASy Swiss-Prot
Match: WDR5_RAT (WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.840e-11
Identity = 39/158 (24.68%), Postives = 76/158 (48.10%), Query Frame = 1
Query:  121 VLCMEYDDSTGILAAGGLDAVANIWDIRAGRQMHKFLGHTKWIRSIRMDRD--TVITGSDDWTARMWSIARGTC-DAVLACHAGPVQCVEYSSSDRGIITGSSDGLLRFWENDDGGIKCVKNVTIHSSAILSINA-----GDHWLGIGAADNSMSLFH 570
            V C  ++  + ++ +G  D    IWD++ G+ +     H+  + ++  +RD   +++ S D   R+W  A G C   ++     PV  V++S + + I+  + D  L+ W+   G  KC+K  T H +    I A     G  W+  G+ DN + +++
Sbjct:  132 VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG--KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287          
BLAST of EY674156 vs. ExPASy Swiss-Prot
Match: WDR5_MOUSE (WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.840e-11
Identity = 39/158 (24.68%), Postives = 76/158 (48.10%), Query Frame = 1
Query:  121 VLCMEYDDSTGILAAGGLDAVANIWDIRAGRQMHKFLGHTKWIRSIRMDRD--TVITGSDDWTARMWSIARGTC-DAVLACHAGPVQCVEYSSSDRGIITGSSDGLLRFWENDDGGIKCVKNVTIHSSAILSINA-----GDHWLGIGAADNSMSLFH 570
            V C  ++  + ++ +G  D    IWD++ G+ +     H+  + ++  +RD   +++ S D   R+W  A G C   ++     PV  V++S + + I+  + D  L+ W+   G  KC+K  T H +    I A     G  W+  G+ DN + +++
Sbjct:  132 VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG--KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287          
The following BLAST results are available for this feature:
BLAST of EY674156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
KTNB1_XENLA2.838e-1231.45Katanin p80 WD40-containing subunit B1 OS=Xenopus ... [more]
WDR69_RAT3.707e-1230.77WD repeat-containing protein 69 OS=Rattus norvegic... [more]
KTNB1_XENTR4.841e-1229.41Katanin p80 WD40-containing subunit B1 OS=Xenopus ... [more]
WDS_DROME6.323e-1225.32Protein will die slowly OS=Drosophila melanogaster... [more]
WDR69_XENTR6.323e-1228.79WD repeat-containing protein 69 OS=Xenopus tropica... [more]
WDR69_XENLA8.258e-1228.79WD repeat-containing protein 69 OS=Xenopus laevis ... [more]
WDR5_XENTR8.258e-1224.68WD repeat-containing protein 5 OS=Xenopus tropical... [more]
WDR5B_HUMAN1.079e-1125.85WD repeat-containing protein 5B OS=Homo sapiens GN... [more]
WDR5_RAT1.840e-1124.68WD repeat-containing protein 5 OS=Rattus norvegicu... [more]
WDR5_MOUSE1.840e-1124.68WD repeat-containing protein 5 OS=Mus musculus GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-042-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674156 ID=EY674156; Name=EY674156; organism=Citrus sinensis; type=EST; length=1034bp
GGGGGGAAAAAGGGGGGGGGGGGACGCAGACTTACTCNNNNNNCTCTNNN
NNNNCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCGTCAACCCA
GCGTCCGGTTGCTCAGTCCCGTTCTGTGTATGGAGTATGATGACTCCACT
GGGATCTTGGCTGCTGGTGGTTTAGACGCGGTTGCAAATATCTGGGACAT
TCGTGCTGGTCGGCAAATGCACAAGTTTCTAGGGCACACAAAATGGATTC
GGTCAATTAGAATGGACAGAGACACTGTGATTACTGGTAGTGATGATTGG
ACAGCAAGAATGTGGTCTATTGCCAGAGGAACATGTGATGCTGTTCTAGC
TTGTCATGCTGGCCCAGTACAATGTGTTGAATATTCCTCATCAGATAGAG
GAATAATTACAGGTTCGAGTGATGGGCTACTCCGGTTTTGGGAAAATGAT
GATGGAGGCATAAAGTGTGTGAAGAATGTTACCATTCATTCATCTGCTAT
ATTGTCAATCAACGCTGGGGATCACTGGTTAGGAATTGGAGCAGCTGACA
ATTCAATGTCTCTATTCCATCGACCTCAAGAGAGACTTGGTGGATTCTCT
TGGCACTGGATTCTAAATGTCTGGGTGGCGACTCTACAGAACCCCTCAAA
AGACCGCTGCTGTGGTAAGGGGCATAACTTCTGATCCTCAAAGAAAAAGG
ATATGCAACCGCGGGTCAGAATGGGACTTCTTCCGCTCTGGGCACCCCAC
ATTCACCATTTCAGCTCCCTGTGGCCTCCCTCATGCTTGCACTTTAAGAG
CTCTTGTATACCCTTGCGGAACAACCCTTAGGGTGTGGGTGGGAAAACAA
CTCTGGGATTGGCTCTGAACACCTCCCCGCCTCCGCACTCCTTGACCTGT
ATTCTTCATATGTTTCTCACCCACCCTTAGGGCTTAGTCCATATTGTTGA
TTCTTTCTTGTGAGCCGCCTCAAGGTCCCCACAGGGTGTGCTTTTTATTC
TCCATCCCCCCTTCCACCAACCTTCAGAATCTAC
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