EY674144

Overview
NameEY674144
Unique NameEY674144
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674144 vs. ExPASy Swiss-Prot
Match: PPIL3_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Neurospora crassa GN=cyp-10 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.371e-11
Identity = 56/168 (33.33%), Postives = 82/168 (48.81%), Query Frame = 3
Query:  228 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGE-FSD-----VKH-VRGILSMGRYCDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDE---TLRKLEGLPTRKEGIF--VMPTERITIHSS 695
            V   T  GD++   +    P+T ++   L   G YN + F R+   F+ Q      G  A  +  +  +  +++ G  F D     ++H  RGI+SM     PN+  S F IL   APHLDG   VFGK+  GDE   TL KLEGL   K+      +  ER+T+H++
Sbjct:    3 VTLHTTLGDLKIEIFCESVPKTAENFLALCASGYYNASPFHRMIPSFMVQT-----GAPANPSPPENPKGGRSIYGPTFEDEIRPVLRHNERGIVSMANK-GPNTNGSQFFILFDKAPHLDGLNTVFGKLI-GDESLQTLAKLEGLEVDKKNRIKEEVRIERVTVHAN 163          
BLAST of EY674144 vs. ExPASy Swiss-Prot
Match: PPIA_SALTY (Peptidyl-prolyl cis-trans isomerase A OS=Salmonella typhimurium GN=ppiA PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 3.096e-11
Identity = 56/168 (33.33%), Postives = 81/168 (48.21%), Query Frame = 3
Query:  216 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD--VKHVRGILSMGRYCDPNSAASSFSILLGDAPHLD-GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 695
            G   V+  T+ G+IE       AP +V +    V  G YN   F RV  GF+ Q     GG     NE  + +     +   +D  +++ RG ++M R  D +SA S F I + D   LD GQ    YAVFGKV KG +   K+  +PT   G +  +PT+ + I S+
Sbjct:   27 GDPHVLLTTSAGNIELELNSQKAPVSVKNFVDYVNSGFYNNTTFHRVIPGFMIQ-----GG---GFNEQMQQKKPNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPTKPVVILSA 186          
BLAST of EY674144 vs. ExPASy Swiss-Prot
Match: CYPE_DICDI (Peptidyl-prolyl cis-trans isomerase cypE OS=Dictyostelium discoideum GN=cypE PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.096e-11
Identity = 47/143 (32.87%), Postives = 71/143 (49.65%), Query Frame = 3
Query:  228 VVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTVVGEFSDVKHV-RGILSMGRYCDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKE 650
            V  QT  GDI    Y + AP+   + ++L + G Y+   F R+ K F+ Q  D +G GR       ++ E E T      ++KH   GILSM      NS  S F I  G  P LDG++ +FG+V  G + ++K+  + T  +
Sbjct:    6 VTLQTTVGDITLELYYNHAPKACKNFYELSKRGYYDNTIFHRLIKDFMIQGGDPLGNGRGGESIYGKKFEDEIT-----KELKHTGAGILSMAN-SGVNSNGSQFFITFGPTPWLDGKHTIFGRVKSGMKVVQKMNAMQTNND 142          
BLAST of EY674144 vs. ExPASy Swiss-Prot
Match: PPIA_HELPJ (Peptidyl-prolyl cis-trans isomerase OS=Helicobacter pylori J99 GN=ppiA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.044e-11
Identity = 47/144 (32.64%), Postives = 69/144 (47.92%), Query Frame = 3
Query:  180 IGTASFQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYCDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD 608
            I T   +E+    +A    +TN G+I    +   APQ V +   L + G YN  +F RV  GFVAQ     G G   P + ++   A        +  KH RG +SM  +   ++  S F +   D PHLDG++ VFGK+T  +
Sbjct:    4 IKTYDIKEEELAKTAYATIKTNKGNITLELFYKDAPQAVSNFVTLAKEGFYNGLNFHRVIAGFVAQGGCPYGTGTGGPEHRIKCEVAH-------NPNKHQRGSISMA-HAGRDTGGSQFFLCFVDLPHLDGEHTVFGKITSAE 139          
BLAST of EY674144 vs. ExPASy Swiss-Prot
Match: PPIA_HELPY (Peptidyl-prolyl cis-trans isomerase OS=Helicobacter pylori GN=ppiA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.282e-11
Identity = 47/144 (32.64%), Postives = 69/144 (47.92%), Query Frame = 3
Query:  180 IGTASFQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTVVGEFSDVKHVRGILSMGRYCDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGD 608
            I T   +E+    +A    +TN G+I    +   APQ V +   L + G YN  +F RV  GFVAQ     G G   P + ++   A        +  KH RG +SM  +   ++  S F +   D PHLDG++ VFGK+T  +
Sbjct:    5 IKTYEIKEEELAKTAYATIKTNKGNIALELFYKDAPQAVSNFVTLAKEGFYNGLNFHRVIAGFVAQGGCPYGTGTGGPGHRIKCEVAH-------NPNKHKRGSISMA-HAGRDTGGSQFFLCFVDLPHLDGEHTVFGKITSAE 140          
BLAST of EY674144 vs. ExPASy Swiss-Prot
Match: PPIL1_GIBZE (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Gibberella zeae GN=CYP1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.898e-11
Identity = 50/170 (29.41%), Postives = 80/170 (47.06%), Query Frame = 3
Query:  219 SARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTVVGEFSDVKHV-RGILSMGRYCDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEKEI 722
            +  +V +T  G +    Y + AP+T ++   LVR G Y+   F R+   F+ Q  D  G GR       ++ E E         +KH   GILSM     PN+  S F + L   P LDG++ +FG+V  G  T++++  + T  E     P E + I  +   + E++I
Sbjct:    2 TTNIVLETTMGSLILELYTTHAPKTCNNFTTLVRRGYYDNTIFHRIIPNFMVQGGDPTGTGRGGSSIFGEKFEDEID-----PGLKHTGAGILSMAN-AGPNTNGSQFFVTLAPTPWLDGKHTIFGRVKSGMGTIKRMGLVKTGSED---RPVEEVKIVKARVVEEEEQI 162          
BLAST of EY674144 vs. ExPASy Swiss-Prot
Match: PPIA_ECOLI (Peptidyl-prolyl cis-trans isomerase A OS=Escherichia coli (strain K12) GN=ppiA PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.898e-11
Identity = 54/167 (32.34%), Postives = 82/167 (49.10%), Query Frame = 3
Query:  216 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYCDPNSAASSFSILLGDAPHLD-GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 695
            G   V+  T+ G+IE       AP +V +    V  G YN   F RV  GF+ Q     GG      ++Q+ +    +  E  + +++ RG ++M R  D +SA S F I + D   LD GQ    YAVFGKV KG +   K+  +PT   G +  +P++ + I S+
Sbjct:   27 GDPHVLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQ-----GGGFT--EQMQQKKPNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPSKPVVILSA 186          
BLAST of EY674144 vs. ExPASy Swiss-Prot
Match: PPIA_ECOL6 (Peptidyl-prolyl cis-trans isomerase A OS=Escherichia coli O6 GN=ppiA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.898e-11
Identity = 54/167 (32.34%), Postives = 82/167 (49.10%), Query Frame = 3
Query:  216 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYCDPNSAASSFSILLGDAPHLD-GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 695
            G   V+  T+ G+IE       AP +V +    V  G YN   F RV  GF+ Q     GG      ++Q+ +    +  E  + +++ RG ++M R  D +SA S F I + D   LD GQ    YAVFGKV KG +   K+  +PT   G +  +P++ + I S+
Sbjct:   27 GDPHVLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQ-----GGGFT--EQMQQKKPNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPSKPVVILSA 186          
BLAST of EY674144 vs. ExPASy Swiss-Prot
Match: PPIA_ECO57 (Peptidyl-prolyl cis-trans isomerase A OS=Escherichia coli O157:H7 GN=ppiA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.898e-11
Identity = 54/167 (32.34%), Postives = 82/167 (49.10%), Query Frame = 3
Query:  216 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD-VKHVRGILSMGRYCDPNSAASSFSILLGDAPHLD-GQ----YAVFGKVTKGDETLRKLEGLPTRKEGIFV-MPTERITIHSS 695
            G   V+  T+ G+IE       AP +V +    V  G YN   F RV  GF+ Q     GG      ++Q+ +    +  E  + +++ RG ++M R  D +SA S F I + D   LD GQ    YAVFGKV KG +   K+  +PT   G +  +P++ + I S+
Sbjct:   27 GDPHVLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQ-----GGGFT--EQMQQKKPNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPSKPVVILSA 186          
The following BLAST results are available for this feature:
BLAST of EY674144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
PPIL3_NEUCR2.371e-1133.33Peptidyl-prolyl cis-trans isomerase-like 3 OS=Neur... [more]
PPIA_SALTY3.096e-1133.33Peptidyl-prolyl cis-trans isomerase A OS=Salmonell... [more]
CYPE_DICDI3.096e-1132.87Peptidyl-prolyl cis-trans isomerase cypE OS=Dictyo... [more]
PPIA_HELPJ4.044e-1132.64Peptidyl-prolyl cis-trans isomerase OS=Helicobacte... [more]
PPIA_HELPY5.282e-1132.64Peptidyl-prolyl cis-trans isomerase OS=Helicobacte... [more]
PPIL1_GIBZE6.898e-1129.41Peptidyl-prolyl cis-trans isomerase-like 1 OS=Gibb... [more]
PPIA_ECOLI6.898e-1132.34Peptidyl-prolyl cis-trans isomerase A OS=Escherich... [more]
PPIA_ECOL66.898e-1132.34Peptidyl-prolyl cis-trans isomerase A OS=Escherich... [more]
PPIA_ECO576.898e-1132.34Peptidyl-prolyl cis-trans isomerase A OS=Escherich... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-027-G01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674144 ID=EY674144; Name=EY674144; organism=Citrus sinensis; type=EST; length=1026bp
AAAAAAAAAAAAAAAAAAAAAACAANNCCCCCGNNNGGCACAAAANANAA
CACTGGTCGTCTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNAGGTTATCTTTGCCAGCCATAACATAGAGATAAAATGTTGAATGTGA
TTAGGATCTTTTTGACGTTTTTTACCCTTATTGGTACCGCCTCGTTCCAG
GAGGATCCCCAGCTCGGCTCAGCTCGCGTTGTCTTTCAGACAAATTATGG
AGATATTGAATTTGGGTTCTATCCTAGTGTTGCACCTCAAACAGTTGATC
ACATATTCAAACTTGTTCGTCTCGGTTGTTATAACACCAATCACTTTTTC
CGGGTTGATAAAGGGTTTGTTGCACAAGTAGCTGATGTTGTGGGTGGACG
GTCAGCTCCTATGAATGAAGTGCAACGTGTAGAGGCTGAAAAAACTGTTG
TCGGTGAATTTAGTGATGTTAAACATGTCAGAGGCATTCTTTCAATGGGA
AGGTATTGTGATCCAAACAGTGCAGCGTCCTCGTTTTCAATACTTCTTGG
AGATGCTCCCCATCTTGATGGTCAGTACGCAGTATTTGGTAAAGTTACTA
AAGGCGATGAGACTTTGAGAAAGCTTGAGGGACTCCCTACACGTAAAGAG
GGGATCTTTGTGATGCCGACTGAACGCATCACAATCCATTCATCATATTA
TTATGATACAGAGAAGGAAATCCGGTAAAAAAAAAGGTCANGTTTTGAAC
AAAGGCTTACTGCTTCTGCCATTGAATTTAAAGAAAGAAGAATGAATGCT
TCCCTTGAGATTAAAATGTAAAGGGTTATTCGCAAGAAAGGNAATTTCCT
CATTGGGAGAAGCTATTAGAGCACCTGGCTTGGTTTAAGCAAAACCCACC
TGGAAGGTGGGCCTTTCACCCCGGGAAAAAAAAAACCCTTTCCCCTGAAT
GGGTAGGAAACATGAAGACCCTGTGTTTTTTAAAAACTTACAATTTTCTT
TTTTGAAACTCAAATTAAAGAAAAAT
back to top