EY685306
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY685306 vs. ExPASy Swiss-Prot
Match: PSAD_PORPU (Photosystem I reaction center subunit II OS=Porphyra purpurea GN=psaD PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 5.838e-47 Identity = 92/134 (68.66%), Postives = 101/134 (75.37%), Query Frame = 2 Query: 14 NTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEVKFTGKQVYD 412 N PSP FGGSTGG LR A+VEE Y ITW E FEMPTGG A MR G NLL LA+KEQCLALGT+L+ K+KI Y+ YRVFPNGEVQYLHPKDGV+PEKVN GR + SIGKNV+PI VKFT K YD Sbjct: 8 NMPSPTFGGSTGGWLRAAEVEEKYAITWTGKNESKFEMPTGGTATMRDGENLLYLAKKEQCLALGTQLKGKFKISDYKIYRVFPNGEVQYLHPKDGVFPEKVNAGRASINSVDHSIGKNVNPINVKFTNKATYD 141
BLAST of EY685306 vs. ExPASy Swiss-Prot
Match: PSAD_PORYE (Photosystem I reaction center subunit II OS=Porphyra yezoensis GN=psaD PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 2.218e-46 Identity = 90/134 (67.16%), Postives = 102/134 (76.12%), Query Frame = 2 Query: 14 NTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEVKFTGKQVYD 412 N PSP FGGSTGG LR A+VEE Y ITW E FEMPTGG A MR G NLL LA+KEQCLALGT+L+SK+KI Y+ YRVFPNGEVQYLHPKDGV+PEKVN GR V SIG+N++P++VKF K YD Sbjct: 8 NMPSPTFGGSTGGWLRAAEVEEKYAITWTGKNESKFEMPTGGTATMRNGENLLYLAKKEQCLALGTQLKSKFKISDYKIYRVFPNGEVQYLHPKDGVFPEKVNTGRASVNSVDHSIGQNINPVDVKFMNKATYD 141
BLAST of EY685306 vs. ExPASy Swiss-Prot
Match: PSAD_ODOSI (Photosystem I reaction center subunit II OS=Odontella sinensis GN=psaD PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 2.218e-46 Identity = 91/132 (68.94%), Postives = 102/132 (77.27%), Query Frame = 2 Query: 17 TPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEVKFTGKQVYD 412 TP P FGGSTGG LR A+VEE Y ITW S KEQIFEMPTGGAAIMR G NLL LARKEQCLALGT+LR+ Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR V SIGKN +P +KF+G Y+ Sbjct: 7 TPFPTFGGSTGGWLRAAEVEEKYAITWTSKKEQIFEMPTGGAAIMRNGENLLYLARKEQCLALGTQLRTFKINDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRTSVNSRGFSIGKNPNPASIKFSGITTYE 138
BLAST of EY685306 vs. ExPASy Swiss-Prot
Match: PSAD_MASLA (Photosystem I reaction center subunit II OS=Mastigocladus laminosus GN=psaD PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 2.218e-46 Identity = 87/130 (66.92%), Postives = 103/130 (79.23%), Query Frame = 2 Query: 23 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEVKFTGKQVYD 412 +PIFGGSTGGLL+KA+VEE Y ITW SPKEQ+FEMPTGGAA MRQG NLL LARKEQC+ALG++LR Y+ YR++PNGE Y+HP DGV+PEKVNPGRQ V N R IG+N P ++KF+G YD Sbjct: 9 TPIFGGSTGGLLKKAEVEEKYAITWTSPKEQVFEMPTGGAAKMRQGQNLLYLARKEQCIALGSQLRRLKITDYKIYRIYPNGETAYIHPADGVFPEKVNPGRQKVRYNDRRIGQNPDPAKLKFSGVATYD 138
BLAST of EY685306 vs. ExPASy Swiss-Prot
Match: PSAD_SKECO (Photosystem I reaction center subunit II OS=Skeletonema costatum GN=psaD PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 2.453e-45 Identity = 89/132 (67.42%), Postives = 101/132 (76.52%), Query Frame = 2 Query: 17 TPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEVKFTGKQVYD 412 TP P FGGSTGG LR A+VEE Y ITW S KEQIFEMPTGG+AIMR G NLL LARKEQCLAL T+LR+ Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR V SIGKN +P +KF+G Y+ Sbjct: 7 TPFPTFGGSTGGWLRAAEVEEKYAITWTSAKEQIFEMPTGGSAIMRNGENLLYLARKEQCLALSTQLRTFKINDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRTSVNSRGFSIGKNPNPASIKFSGITTYE 138
BLAST of EY685306 vs. ExPASy Swiss-Prot
Match: PSAD_SYNY3 (Photosystem I reaction center subunit II OS=Synechocystis sp. (strain PCC 6803) GN=psaD PE=1 SV=2) HSP 1 Score: 179.489 bits (454), Expect = 7.136e-45 Identity = 87/133 (65.41%), Postives = 103/133 (77.44%), Query Frame = 2 Query: 26 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEVKFTGKQVYDL 415 P FGGSTGGLL KA EE Y ITW S EQ+FEMPTGGAAIM +G NLL LARKEQCLALGT+LR+K+K K Y+ YRV+P+GEVQYLHP DGV+PEKVN GR+ G R IG+N P+ +KF+GK Y++ Sbjct: 9 PKFGGSTGGLLSKANREEKYAITWTSASEQVFEMPTGGAAIMNEGENLLYLARKEQCLALGTQLRTKFKPKIQDYKIYRVYPSGEVQYLHPADGVFPEKVNEGREAQGTKTRRIGQNPEPVTIKFSGKAPYEV 141
BLAST of EY685306 vs. ExPASy Swiss-Prot
Match: PSAD_SYNP6 (Photosystem I reaction center subunit II OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=psaD PE=1 SV=3) HSP 1 Score: 171.785 bits (434), Expect = 1.488e-42 Identity = 83/132 (62.88%), Postives = 100/132 (75.76%), Query Frame = 2 Query: 23 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEVKFTGKQVY 409 +P+FGGSTGGLL+ A+ EE Y ITW S KEQ+FE+PTGGAA+M +G NLL ARKEQ LALGT+LR+K+K K Y+ YR FP +V YLHPKDGV+PEKVN GR G R IG+N +P +KFTGKQ Y Sbjct: 9 TPVFGGSTGGLLKSAETEEKYAITWTSTKEQVFELPTGGAAVMHEGDNLLYFARKEQALALGTQLRTKFKPKIESYKIYRFFPGADVGYLHPKDGVFPEKVNEGRSFAGKVDRRIGQNPNPATIKFTGKQPY 140
BLAST of EY685306 vs. ExPASy Swiss-Prot
Match: PSAD_CYACA (Photosystem I reaction center subunit II OS=Cyanidium caldarium GN=psaD PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 4.787e-41 Identity = 79/131 (60.31%), Postives = 100/131 (76.34%), Query Frame = 2 Query: 20 PSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEVKFTGKQVY 409 PSP F G+TGG LR + +EE Y ITW S E IFE+PTGG A M+ G NLL LA+KEQCLALG +L+ K+KI ++ YR+FPNGE Q+LHPKDGV+PEKVN GR+ +G +IGKN++P EVKFT K ++ Sbjct: 10 PSPEFYGNTGGWLRSSDIEEKYAITWSSKNEDIFEIPTGGVAKMKAGDNLLYLAKKEQCLALGNQLKIKFKILNFKIYRIFPNGEAQFLHPKDGVFPEKVNEGRKPIGKIDHNIGKNLNPAEVKFTHKTIF 140
BLAST of EY685306 vs. ExPASy Swiss-Prot
Match: PSAD_NOSS8 (Photosystem I reaction center subunit II OS=Nostoc sp. (strain PCC 8009) GN=psaD PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 6.252e-41 Identity = 83/131 (63.36%), Postives = 100/131 (76.34%), Query Frame = 2 Query: 23 SPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEVKFTGKQVYD 412 +P+F GSTGGLL KA VEE Y ITW SPK Q+FE+PTGGAA M QG NLL LARKEQ +ALG +LR K+KI Y+ YR+FPNGE ++HP DGV+PEKVN GR+ V R IG+N SP ++KF+GK YD Sbjct: 8 TPLFAGSTGGLLTKANVEEKYAITWTSPKAQVFELPTGGAATMNQGENLLYLARKEQGIALGGQLR-KFKITDYKIYRIFPNGETTFIHPADGVFPEKVNEGREKVRFVPRRIGQNPSPAQLKFSGKYTYD 137
BLAST of EY685306 vs. ExPASy Swiss-Prot
Match: PSAD_THEVL (Photosystem I reaction center subunit II OS=Thermosynechococcus vulcanus GN=psaD PE=1 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 1.819e-40 Identity = 79/130 (60.77%), Postives = 98/130 (75.38%), Query Frame = 2 Query: 26 PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGT-RLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGVNYRSIGKNVSPIEVKFTGKQVYD 412 P++GGSTGGLL A EE Y ITW SPKEQ+FEMPT GAA+MR+G NL+ ARKEQCLAL +LR + Y+ YR+FP+GE +HPKDGV+PEKVN GR+ V RSIG+N +P ++KFTGK+ YD Sbjct: 9 PLYGGSTGGLLSAADTEEKYAITWTSPKEQVFEMPTAGAAVMREGENLVYFARKEQCLALAAQQLRPRKINDYKIYRIFPDGETVLIHPKDGVFPEKVNKGREAVNSVPRSIGQNPNPSQLKFTGKKPYD 138 The following BLAST results are available for this feature:
BLAST of EY685306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >EY685306 ID=EY685306; Name=EY685306; organism=Citrus sinensis; type=EST; length=490bpback to top |