EY673892

Overview
NameEY673892
Unique NameEY673892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 1.366e-31
Identity = 81/210 (38.57%), Postives = 112/210 (53.33%), Query Frame = 1
Query:   88 LLKKFGNSKEFIKSAAQTLEGKTGGY--SSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711
            L K+FG S  F+ S       + GG   S+     L EA  V  CGYE  S WG E+G +YG+  ED LTG  +H++GWRS YC+P   AF G A  +    + Q  RWA G +EILFS+  PI     G+L+F +  AY+    + + SIP L Y  LPA C+ TN   +P++     +  L+LF+      +LE   +G+ I  WW N
Sbjct:  703 LEKRFGQSAVFVASTLM----ENGGVPPSATPENLLKEAIHVISCGYEDKSDWGMEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKLPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYNGRLKFLERFAYVNTTIYPITSIPLLMYCTLPAVCLFTNQFIIPQISNIASIWFLSLFLSIFATGILEMRWSGVGIDEWWRN 908          
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.366e-31
Identity = 81/233 (34.76%), Postives = 120/233 (51.50%), Query Frame = 1
Query:   13 FHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711
            F+  D+  G+   + E    + +  L K+FG S  FI S   T  G     S+N +  L EA  V  CGYE  + WG E+G +YG+  ED LTG  +H++GW S YC+P    F G A  +    + Q  RWA G +EIL S+  PI     G+L+  + LAY+  + + + SIP + Y  LPA C++TN   +P++     +  + LF       +LE   +G+ I  WW N
Sbjct:  688 FNMEDIEEGIEGYEDERSVLMSQKRLEKRFGQSPIFIASTFMTQGGIPP--STNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPCFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLIAYCVLPAICLLTNKFIIPEISNYAGMFFILLFASIFATGILELRWSGVGIEDWWRN 918          
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.366e-31
Identity = 81/233 (34.76%), Postives = 120/233 (51.50%), Query Frame = 1
Query:   13 FHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711
            F+  D+  G+   + E    + +  L K+FG S  FI S   T  G     S+N +  L EA  V  CGYE  + WG E+G +YG+  ED LTG  +H++GW S YC+P    F G A  +    + Q  RWA G +EIL S+  PI     G+L+  + LAY+  + + + SIP + Y  LPA C++TN   +P++     +  + LF       +LE   +G+ I  WW N
Sbjct:  688 FNMEDIEEGIEGYEDERSVLMSQKRLEKRFGQSPIFIASTFMTQGGIPP--STNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPCFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLIAYCVLPAICLLTNKFIIPEISNYAGMFFILLFASIFATGILELRWSGVGIEDWWRN 918          
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CESAA_ARATH (Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.329e-31
Identity = 77/213 (36.15%), Postives = 114/213 (53.52%), Query Frame = 1
Query:   73 IVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711
            + +  L K+FG S  FI  AA  +E      ++N    L EA  V  CGYE  + WG E+G +YG+  ED LTG  +H++GW S YC+P   AF G A  +    + Q  RWA G +EIL S+  PI     G+L+  + +AY+  + + + SIP L Y  LPA+C+ITN+  +P++     L  + LF       +LE   + + +  WW N
Sbjct:  700 VSQKRLEKRFGQSPVFI--AATFMEQGGLPSTTNPLTLLKEAIHVISCGYEAKTDWGKEIGWIYGSVTEDILTGFKMHARGWISIYCVPSRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERIAYINTIVYPITSIPLLAYCMLPAFCLITNTFIIPEISNLASLCFMLLFASIYASAILELKWSDVALEDWWRN 910          
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.329e-31
Identity = 78/208 (37.50%), Postives = 110/208 (52.88%), Query Frame = 1
Query:   88 LLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711
            L K+FG S  F+ S      G     S+     L EA  V  CGYE  + WG E+G +YG+  ED LTG  +H++GWRS YC+P   AF G A  +    + Q  RWA G +EILFS+  PI     G+L+F +  AY+    + L SIP L Y  LPA C++T    +P++     +  ++LF+      +LE   +G+ I  WW N
Sbjct:  719 LEKRFGQSAAFVASTLMEYGGVP--QSATPESLLKEAIHVISCGYEDKTEWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLIYCVLPAICLLTGKFIIPEISNFASIWFISLFISIFATGILEMRWSGVGIDEWWRN 924          
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.329e-31
Identity = 79/208 (37.98%), Postives = 110/208 (52.88%), Query Frame = 1
Query:   88 LLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711
            L K+FG S  F+ S      G     S+     L EA  V  CGYE  S WG E+G +YG+  ED LTG  +H++GWRS YC+P   AF G A  +    + Q  RWA G +EILFS+  PI     G+L+F +  AY+    + L SIP L Y  LPA C++T    +P++     +  ++LF+      +LE   +G+ I  WW N
Sbjct:  711 LEKRFGQSSVFVASTLMEYGGVP--QSATPESLLKEAIHVISCGYEDKSDWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLLYCILPAICLLTGKFIIPEISNFASIWFISLFLSIFATGILEMRWSGVGIDEWWRN 916          
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.329e-31
Identity = 79/208 (37.98%), Postives = 110/208 (52.88%), Query Frame = 1
Query:   88 LLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711
            L K+FG S  F+ S      G     S+     L EA  V  CGYE  S WG E+G +YG+  ED LTG  +H++GWRS YC+P   AF G A  +    + Q  RWA G +EILFS+  PI     G+L+F +  AY+    + L SIP L Y  LPA C++T    +P++     +  ++LF+      +LE   +G+ I  WW N
Sbjct:  711 LEKRFGQSSVFVASTLMEYGGVP--QSATPESLLKEAIHVISCGYEDKSDWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLLYCILPAICLLTGKFIIPEISNFASIWFISLFLSIFATGILEMRWSGVGIDEWWRN 916          
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.973e-31
Identity = 79/220 (35.91%), Postives = 116/220 (52.73%), Query Frame = 1
Query:   52 QIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711
            + +  G + + +L KKFG S  F+  A+  LE      S++ +  L EA  V  CGYE  + WG E+G +YG+  ED LTG  +H  GWRS YC+P   AF G A  +    + Q  RWA G +EI FSK  P+     G L+F +  +Y+  + +   SIP L Y  LPA C++T     P++     L  ++LF+   +  +LE   +G+ I  WW N
Sbjct:  718 ETDKAGIVNQQKLEKKFGQSSVFV--ASTLLENGGTLKSASPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSITEDILTGFKMHCHGWRSIYCIPKRPAFKGSAPLNLSDRLHQVLRWALGSVEIFFSKHCPLWYGYGGGLKFLERFSYINSIVYPWTSIPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLFICIFVTGILEMRWSGVAIDDWWRN 935          
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.973e-31
Identity = 82/236 (34.75%), Postives = 120/236 (50.85%), Query Frame = 1
Query:   13 FHRRDVVYGL-CLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGY--SSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711
            F   D+  GL   D++E    + +    K+FG S  FI S       + GG   ++N S  + EA  V  CGYE  + WG E+G +YG+  ED LTG  +H +GW+S YC+P   AF G A  +    + Q  RWA G +EI FS+  P+     GKL+  + LAY+  + +   SIP L Y  +PA C++T    +P +     +  LALF+      +LE   +G+ I   W N
Sbjct:  660 FDLEDIEEGLEGYDELEKSSLMSQKNFEKRFGMSPVFIASTLM----ENGGLPEATNTSSLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFRMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFFSRHCPLWYAWGGKLKILERLAYINTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTINNFASIWFLALFLSIIATAILELRWSGVSINDLWRN 891          
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.851e-31
Identity = 79/224 (35.27%), Postives = 117/224 (52.23%), Query Frame = 1
Query:   49 DQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGY--SSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPI-LATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711
            D+ E    I +    K FG S  FI+S       + GG   S+N S  + EA  V  CGYE  + WG E+G +YG+  ED LTG  +H +GWRS YC+PI  AF G A  +    + Q  RWA G +EI  S+  P+      G+L++ Q L+Y+  + +   S+P + Y  LPA C++T    +P +     +  L LF+   + ++LE   +G+ I  WW N
Sbjct:  613 DEYERSMLISQMSFEKSFGLSSVFIESTLM----ENGGVPESANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPIRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLSYINTIVYPFTSLPLIAYCCLPAICLLTGKFIIPTLSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWRN 832          
The following BLAST results are available for this feature:
BLAST of EY673892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CESA3_ARATH1.366e-3138.57Cellulose synthase A catalytic subunit 3 [UDP-form... [more]
CESA1_ORYSJ1.366e-3134.76Probable cellulose synthase A catalytic subunit 1 ... [more]
CESA1_ORYSI1.366e-3134.76Probable cellulose synthase A catalytic subunit 1 ... [more]
CESAA_ARATH2.329e-3136.15Probable cellulose synthase A catalytic subunit 10... [more]
CESA8_ORYSJ2.329e-3137.50Probable cellulose synthase A catalytic subunit 8 ... [more]
CESA2_ORYSJ2.329e-3137.98Probable cellulose synthase A catalytic subunit 2 ... [more]
CESA2_ORYSI2.329e-3137.98Probable cellulose synthase A catalytic subunit 2 ... [more]
CESA6_ORYSJ3.973e-3135.91Probable cellulose synthase A catalytic subunit 6 ... [more]
CESA4_ARATH3.973e-3134.75Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA4_ORYSJ8.851e-3135.27Cellulose synthase A catalytic subunit 4 [UDP-form... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-004-D08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY673892 ID=EY673892; Name=EY673892; organism=Citrus sinensis; type=EST; length=929bp
GGTACAGGAGCTTTTCATAGACGAGATGTTGTATATGGTCTATGCCTCGA
TCAGATTGAACATCAAGGAAATATAGTGGAAGATGAGCTGCTGAAAAAAT
TCGGAAATTCAAAAGAATTCATCAAATCAGCTGCTCAGACTTTGGAAGGG
AAGACAGGAGGTTATTCAAGCAACATATCGAGATCGCTTGATGAAGCACA
CCGAGTTGCAGATTGTGGTTATGAGTACGGTAGTAGCTGGGGTGATGAGG
TGGGGTGCTTGTATGGCGCCACAGCAGAAGATAACTTAACTGGCTTGGTG
ATCCATTCAAAAGGCTGGAGATCAGGCTACTGCTTGCCGATCCCACATGC
CTTTCTTGGCTGTGCGTCGCCCAGCGGCCCTGCTGGGATGAGACAACAGA
AAAGGTGGGCCACGGGACTGCTTGAAATCCTATTCAGCAAACGTAACCCC
ATATTGGCTACTCTCATCGGGAAGCTCCAATTTCGACAATGTTTGGCTTA
TTTGTGGATCCTTACTTGGGGCTTGCGCTCAATTCCCGAGCTGTGCTACA
TTGCCCTTCCAGCTTATTGCATCATCACCAACTCCACTTTCCTGCCAAAG
GTCCAGGAACCAACCGTATTGATCCCTCTTGCACTTTTTGTGATCTACAA
ATTATATACTCTATTAGAGTACATTCAGGCTGGTTTAATCATCCGTTCAT
GGTGGGTTAACAATTGTATGGGCCGAAATTGTCACAACAAGTTGCATGGG
TTATTTGGTCTTGTAAACGCCCCGCCTCAACATTTTGGATTCCCCGAGGG
AGTTTTTGAAATTAACCCAAAAAATTTATCCAACCCCACCGAGGTCCAAG
AAAGTGAGGTTTGAACAATTCCCCTTTTTTTTTGTTCCCGGGCCGGAAAA
ATAATTCTGGGGGGCCCCCCCGTTGGTGG
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