EY673892

Overview
NameEY673892
Unique NameEY673892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 8.851e-31
Identity = 79/224 (35.27%), Postives = 117/224 (52.23%), Query Frame = 1
Query:   49 DQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGY--SSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPI-LATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711
            D+ E    I +    K FG S  FI+S       + GG   S+N S  + EA  V  CGYE  + WG E+G +YG+  ED LTG  +H +GWRS YC+PI  AF G A  +    + Q  RWA G +EI  S+  P+      G+L++ Q L+Y+  + +   S+P + Y  LPA C++T    +P +     +  L LF+   + ++LE   +G+ I  WW N
Sbjct:  613 DEYERSMLISQMSFEKSFGLSSVFIESTLM----ENGGVPESANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPIRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLSYINTIVYPFTSLPLIAYCCLPAICLLTGKFIIPTLSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWRN 832          
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.156e-30
Identity = 73/221 (33.03%), Postives = 112/221 (50.68%), Query Frame = 1
Query:   49 DQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711
            D++E    + +    K+FG S  FI S      G   G +++ +  + EA  V  CGYE  + WG E+G +YG+  ED LTG  +H +GW+S YC P   AF G A  +    + Q  RWA G +EI  S+  P+     G+L++ +  AY   + +   SIP L Y  +PA C++T    +P +     +  +ALF+      +LE   +G+ I  WW N
Sbjct:  685 DELERSSLMSQKSFEKRFGQSPVFIASTLVEDGGLPQGAAADPAALIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCTPARAAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGRLKWLERFAYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFIALFLSIIATGVLELRWSGVSIEDWWRN 905          
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.972e-30
Identity = 78/221 (35.29%), Postives = 117/221 (52.94%), Query Frame = 1
Query:   55 IEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRS--LDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711
            +E     ++ +L KKFG S  F+ SA      + GG + N S +  L EA +V  CGYE  + WG E+G +YG+  ED LTG  +HS GWRS YC P   AF G A  +    + Q  RWA G +EI  S+  PI     G L++ + L+Y+  + +   S+P + Y +LPA C++T    +P++     ++ +ALF    +  +LE     + I  WW N
Sbjct:  712 VEQSTEAMQMKLEKKFGQSPVFVASARM----ENGGMARNASPACLLKEAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHSHGWRSVYCTPKLAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERLSYINSVVYPWTSLPLIVYCSLPAICLLTGKFIVPEISNYASILFMALFSSIAITGILEMQWGKVGIDDWWRN 928          
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.972e-30
Identity = 75/206 (36.41%), Postives = 113/206 (54.85%), Query Frame = 1
Query:   94 KKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711
            K+FG S  FI  AA  +E      ++N +  L EA  V  CGYE  + WG E+G +YG+  ED LTG  +H++GW S YC P   AF G A  +    + Q  RWA G +EIL S+  PI     G+L+  + +AY+  + + + SIP + Y  LPA+C+IT+   +P++     +  + LF+   +  +LE   +G+ I  WW N
Sbjct:  720 KRFGQSPVFI--AATFMEQGGIPPTTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCNPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYHGRLRLLERIAYINTIVYPITSIPLIAYCILPAFCLITDRFIIPEISNYASIWFILLFISIAVTGILELRWSGVSIEDWWRN 923          
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 4.393e-30
Identity = 79/211 (37.44%), Postives = 113/211 (53.55%), Query Frame = 1
Query:   85 ELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRS--LDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711
            +L KKFG S  F+ SA      + GG + N S +  L EA +V  CGYE  + WG E+G +YG+  ED LTG  +HS GWRS YC P   AF G A  +    + Q  RWA G +EI  S+  PI     G L++ + L+Y+  + +   SIP L Y +LPA C++T    +P++     ++ +ALF    +  +LE     + I  WW N
Sbjct:  707 KLEKKFGQSPVFVASAGM----ENGGLARNASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHSHGWRSVYCTPKIPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERLSYINSVVYPWTSIPLLVYCSLPAICLLTGKFIVPEISNYASILFMALFGSIAVTGILEMQWGKVGIDDWWRN 913          
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.737e-30
Identity = 75/224 (33.48%), Postives = 117/224 (52.23%), Query Frame = 1
Query:   46 LDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRS--LDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711
            +  +E +    + +L KKFG S  F+ SA      + GG   N S +  L EA +V  CGYE  + WG E+G +YG+  ED LTG  +H  GWRS YC+P   AF G A  +    + Q  RWA G +EI  S+  PI     G L++ +  +Y+  + +   S+P + Y +LPA C++T    +P++     ++ + +F+   +  +LE    G+ I  WW N
Sbjct:  708 VSNVEKRSEATQLKLEKKFGQSPVFVASAVL----QNGGVPRNASPACLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCMPKRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTSLPLIVYCSLPAVCLLTGKFIVPEISNYAGILFMLMFISIAVTGILEMQWGGVGIDDWWRN 927          
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.669e-29
Identity = 78/218 (35.78%), Postives = 112/218 (51.38%), Query Frame = 1
Query:   58 EHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711
            E  G + + +L KKFG S  F+  A+  LE      S++ +  L EA  V  CGYE  + WG E+G +YG+  ED LTG  +H  GWRS YC+P   AF G A  +    + Q  RWA G +EI FS   P+     G L+  +  +Y+  + +   SIP L Y  LPA C++T     P++     L  ++LF+      +LE   +G+ I  WW N
Sbjct:  721 EKAGIVNQQKLEKKFGQSSVFV--ASTLLENGGTLKSASPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSIYCIPKLPAFKGSAPLNLSDRLHQVLRWALGSVEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPFTSIPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLFICIFATGILEMRWSGVGIDDWWRN 936          
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.180e-29
Identity = 76/209 (36.36%), Postives = 110/209 (52.63%), Query Frame = 1
Query:   94 KKFGNSKEFIKSAAQTLEGKTGGY--SSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPIL-ATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711
            K+FG S  F+ S       + GG   SS+ +  L EA  V  CGYE  + WG E+G +YG+  ED LTG  +H +GWRS YC+P   AF G A  +    + Q  RWA G +EI FS+ +P+L     G L++ +  +Y+    +   S+P L Y  LPA C++T    +P +     L  +ALF+      +LE   +G+ I  WW N
Sbjct:  693 KRFGQSAAFVTSTLM----EEGGVPPSSSPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSVYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKNGNLKWLERFSYINTTIYPFTSLPLLAYCTLPAVCLLTGKFIMPPISTFASLFFIALFISIFATGILEMRWSGVSIEEWWRN 897          
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSI (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.180e-29
Identity = 76/209 (36.36%), Postives = 110/209 (52.63%), Query Frame = 1
Query:   94 KKFGNSKEFIKSAAQTLEGKTGGY--SSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPIL-ATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711
            K+FG S  F+ S       + GG   SS+ +  L EA  V  CGYE  + WG E+G +YG+  ED LTG  +H +GWRS YC+P   AF G A  +    + Q  RWA G +EI FS+ +P+L     G L++ +  +Y+    +   S+P L Y  LPA C++T    +P +     L  +ALF+      +LE   +G+ I  WW N
Sbjct:  693 KRFGQSAAFVTSTLM----EEGGVPPSSSPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSVYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKNGNLKWLERFSYINTTIYPFTSLPLLAYCTLPAVCLLTGKFIMPPISTFASLFFIALFISIFATGILEMRWSGVSIEEWWRN 897          
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.180e-29
Identity = 78/218 (35.78%), Postives = 112/218 (51.38%), Query Frame = 1
Query:   58 EHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711
            E  G + + +L KKFG S  F+  A+  LE      S++ +  L EA  V  CGYE  + WG E+G +YG+  ED LTG  +H  GWRS YC+P   AF G A  +    + Q  RWA G +EI FS   P+     G L+  +  +Y+  + +   SIP L Y  LPA C++T     P++     L  ++LF+      +LE   +G+ I  WW N
Sbjct:  720 EKAGIVNQQKLEKKFGQSSVFV--ASTLLENGGTLKSASPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSIYCIPKRAAFKGSAPLNLSDRLHQVLRWALGSIEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPWTSIPLLAYCTLPAICLLTGKFITPELTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWRN 935          
The following BLAST results are available for this feature:
BLAST of EY673892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CESA4_ORYSI8.851e-3135.27Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA7_ORYSJ1.156e-3033.03Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CESA6_ARATH1.972e-3035.29Cellulose synthase A catalytic subunit 6 [UDP-form... [more]
CESA1_ARATH1.972e-3036.41Cellulose synthase A catalytic subunit 1 [UDP-form... [more]
CESA5_ARATH4.393e-3037.44Cellulose synthase A catalytic subunit 5 [UDP-form... [more]
CESA2_ARATH5.737e-3033.48Cellulose synthase A catalytic subunit 2 [UDP-form... [more]
CESA3_ORYSJ1.669e-2935.78Probable cellulose synthase A catalytic subunit 3 ... [more]
CESA9_ORYSJ2.180e-2936.36Cellulose synthase A catalytic subunit 9 [UDP-form... [more]
CESA9_ORYSI2.180e-2936.36Cellulose synthase A catalytic subunit 9 [UDP-form... [more]
CESA5_ORYSJ2.180e-2935.78Probable cellulose synthase A catalytic subunit 5 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-004-D08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY673892 ID=EY673892; Name=EY673892; organism=Citrus sinensis; type=EST; length=929bp
GGTACAGGAGCTTTTCATAGACGAGATGTTGTATATGGTCTATGCCTCGA
TCAGATTGAACATCAAGGAAATATAGTGGAAGATGAGCTGCTGAAAAAAT
TCGGAAATTCAAAAGAATTCATCAAATCAGCTGCTCAGACTTTGGAAGGG
AAGACAGGAGGTTATTCAAGCAACATATCGAGATCGCTTGATGAAGCACA
CCGAGTTGCAGATTGTGGTTATGAGTACGGTAGTAGCTGGGGTGATGAGG
TGGGGTGCTTGTATGGCGCCACAGCAGAAGATAACTTAACTGGCTTGGTG
ATCCATTCAAAAGGCTGGAGATCAGGCTACTGCTTGCCGATCCCACATGC
CTTTCTTGGCTGTGCGTCGCCCAGCGGCCCTGCTGGGATGAGACAACAGA
AAAGGTGGGCCACGGGACTGCTTGAAATCCTATTCAGCAAACGTAACCCC
ATATTGGCTACTCTCATCGGGAAGCTCCAATTTCGACAATGTTTGGCTTA
TTTGTGGATCCTTACTTGGGGCTTGCGCTCAATTCCCGAGCTGTGCTACA
TTGCCCTTCCAGCTTATTGCATCATCACCAACTCCACTTTCCTGCCAAAG
GTCCAGGAACCAACCGTATTGATCCCTCTTGCACTTTTTGTGATCTACAA
ATTATATACTCTATTAGAGTACATTCAGGCTGGTTTAATCATCCGTTCAT
GGTGGGTTAACAATTGTATGGGCCGAAATTGTCACAACAAGTTGCATGGG
TTATTTGGTCTTGTAAACGCCCCGCCTCAACATTTTGGATTCCCCGAGGG
AGTTTTTGAAATTAACCCAAAAAATTTATCCAACCCCACCGAGGTCCAAG
AAAGTGAGGTTTGAACAATTCCCCTTTTTTTTTGTTCCCGGGCCGGAAAA
ATAATTCTGGGGGGCCCCCCCGTTGGTGG
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