EY673892

Overview
NameEY673892
Unique NameEY673892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.185e-21
Identity = 70/225 (31.11%), Postives = 108/225 (48.00%), Query Frame = 1
Query:   94 KKFGNSKEFIKSAA-------------QTLEGKTGGYSSNISRSLDEAHRVAD------CGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711
            KKFGNS   I S                   G+  G +  + R L +A  VA+      C YE  + WG  VG +YG+  ED +TG  +H++GW+S YC+    AF G A  +    + Q  RWATG +EI FS+ N +LA+   K++F Q +AYL +  +   SI  + Y  LPA  + +    +  +    +   L + +   +  +LE   +G+ +  WW N
Sbjct:  793 KKFGNSNFLINSIPIAEFQGRPLADHPGVKNGRPPG-ALTVPRDLLDASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS--RKMKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVRTLNVTFLTYLLVITLTMCMLAVLEIKWSGISLEEWWRN 1014          
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSI (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.185e-21
Identity = 70/225 (31.11%), Postives = 108/225 (48.00%), Query Frame = 1
Query:   94 KKFGNSKEFIKSAA-------------QTLEGKTGGYSSNISRSLDEAHRVAD------CGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711
            KKFGNS   I S                   G+  G +  + R L +A  VA+      C YE  + WG  VG +YG+  ED +TG  +H++GW+S YC+    AF G A  +    + Q  RWATG +EI FS+ N +LA+   K++F Q +AYL +  +   SI  + Y  LPA  + +    +  +    +   L + +   +  +LE   +G+ +  WW N
Sbjct:  793 KKFGNSNFLINSIPIAEFQGRPLADHPGVKNGRPPG-ALTVPRDLLDASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS--RKMKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVRTLNVTFLTYLLVITLTMCMLAVLEIKWSGISLEEWWRN 1014          
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.185e-21
Identity = 68/224 (30.36%), Postives = 104/224 (46.43%), Query Frame = 1
Query:   94 KKFGNSKEFIKSAA-------------QTLEGKTGGYSSNISRSLD-----EAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711
            KKFGNS   I S                   G+  G  +    +LD     EA  V  C YE  + WG  VG +YG+  ED +TG  +H++GW+S YC+    AF G A  +    + Q  RWATG +EI FS+ N + A+   K++  Q +AYL +  +   S+  + Y  LPA  + +    +  +    +   L + +   L  +LE   +G+ +  WW N
Sbjct:  748 KKFGNSSFLIDSIPVAEFQGRPLADHPSVKNGRPPGALTIPRETLDASIVAEAISVVSCWYEEKTEWGTRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALFAS--SKMKVLQRIAYLNVGIYPFTSVFLIVYCFLPALSLFSGQFIVQTLNVTFLTYLLIITITLCLLAMLEIKWSGIALEEWWRN 969          
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 2.185e-21
Identity = 68/224 (30.36%), Postives = 104/224 (46.43%), Query Frame = 1
Query:   94 KKFGNSKEFIKSAA-------------QTLEGKTGGYSSNISRSLD-----EAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711
            KKFGNS   I S                   G+  G  +    +LD     EA  V  C YE  + WG  VG +YG+  ED +TG  +H++GW+S YC+    AF G A  +    + Q  RWATG +EI FS+ N + A+   K++  Q +AYL +  +   S+  + Y  LPA  + +    +  +    +   L + +   L  +LE   +G+ +  WW N
Sbjct:  748 KKFGNSSFLIDSIPVAEFQGRPLADHPSVKNGRPPGALTIPRETLDASIVAEAISVVSCWYEEKTEWGTRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALFAS--SKMKVLQRIAYLNVGIYPFTSVFLIVYCFLPALSLFSGQFIVQTLNVTFLTYLLIITITLCLLAMLEIKWSGIALEEWWRN 969          
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CSLF9_ORYSJ (Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.727e-21
Identity = 78/250 (31.20%), Postives = 118/250 (47.20%), Query Frame = 1
Query:    1 GTGAFHRRDVVYGLCLDQIEHQGNIVEDELLK------KFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVAD------CGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTF-LPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711
            GTG   RR  +YG    +        ED+  K      ++GNS  FI +       +    +S  + SLDE   +A+      C YE G+ WGD VG +Y    ED +TG  +H KGWRS YC   P AF G A  +    + Q  RW+ G LE+ FS+  P+LA    +L+  Q +AY  +  + + ++  + Y  LP   +  +  F + K     V   +A+  + ++  L+E   AGL +  WW N
Sbjct:  466 GTGCMFRRVALYGADPPRWRP-----EDDDAKALGCPGRYGNSMPFINTIPAAASQERS-IASPAAASLDETAAMAEVEEVMTCAYEDGTEWGDGVGWVYDIATEDVVTGFRLHRKGWRSMYCAMEPDAFRGTAPINLTERLYQILRWSGGSLEMFFSRNCPLLAGC--RLRPMQRVAYANMTAYPVSALFMVVYDLLPVIWLSHHGEFHIQKPFSTYVAYLVAVIAMIEVIGLVEIKWAGLTLLDWWRN 707          
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.358e-21
Identity = 61/176 (34.66%), Postives = 90/176 (51.14%), Query Frame = 1
Query:  184 SLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711
            +++EA  V  C YE  + WG  VG +YG+  ED +TG  +H KGWRS YC+  P AF G A  +    + Q  RWATG +EI FS+ N I A    KL+  Q +AYL +  +   SI  L Y  LP   + +    +  +    ++  L + +      +LE   +G+ +  WW N
Sbjct:  651 TVNEAVNVISCWYEDKTEWGFNVGWIYGSVTEDVVTGFRMHEKGWRSFYCVTEPDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAIFAG--PKLKLLQRIAYLNVGIYPFTSIFILTYCFLPPLSLFSGHFVVETLTGSFLIYLLIITLSLCGLAVLEVKWSGISLEEWWRN 824          
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.121e-20
Identity = 64/219 (29.22%), Postives = 104/219 (47.49%), Query Frame = 1
Query:   58 EHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCL-PIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711
            E+QG +++D      G     +    + L+  T          + EA  V  C YE  + WG  +G +YG+  ED +TG  +H++GWRS YC+ P   AF G A  +    + Q  RWATG +EI FS+ N + A+   +++  Q +AY     +   S+  L Y  LPA  + +    + ++    +   L + +   L  LLE   +G+ +  WW N
Sbjct:  841 EYQGRLLQDTPGCHHGRPAGALAVPREPLDAAT----------VAEAIGVISCFYEEKTEWGRRIGWIYGSVTEDVVTGYRMHNRGWRSVYCVTPRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALFAS--PRMKLLQRVAYFNAGMYPFTSVFLLAYCLLPAVSLFSGKFIVQRLSATFLAFLLVITLTLCLLALLEIKWSGITLHEWWRN 1047          
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.121e-20
Identity = 68/225 (30.22%), Postives = 105/225 (46.67%), Query Frame = 1
Query:   94 KKFGNSKEFIKSAA-------------QTLEGKTGGYSSNISRSLDEAHRVAD------CGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711
            KKFGNS   I S                   G+  G +  I R L +A  VA+      C YE  + WG  +G +YG+  ED +TG  +H++GW+S YC+    AF G A  +    + Q  RWATG +EI FS+ N   A+   +++  Q +AYL +  +   S   + Y  LPA  + +    +  +    ++  L + +   L  LLE   +G+ +  WW N
Sbjct:  768 KKFGNSTFLIDSIPVAEFQGRPLADHPAVQNGRPPG-ALTIPRELLDASTVAEAIAVISCWYEDKTEWGSRIGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAFFAS--PRMKILQRIAYLNVGIYPFTSFFLIVYCFLPALSLFSGQFIVQTLNVTFLVYLLIISITLCLLALLEIKWSGISLEEWWRN 989          
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CSLE2_ORYSJ (Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.671e-19
Identity = 74/238 (31.09%), Postives = 105/238 (44.12%), Query Frame = 1
Query:    1 GTGAFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHR-VADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLY--TLLEYIQAGLIIRSWW 705
            GTG FHRR+    LC       G I   E        +++ + A +T +          +  L+E  R +  C YE+ + WG E G  YG   ED  TGL I  +GWRS Y  P    FLG    S    +   KRW  G L+I  S+ +P L    GK++    + Y     W + S P L Y+ +P+ C +   +  P+   P   IP A +V+   Y  +L E +Q G     WW
Sbjct:  390 GTGCFHRREA---LC-------GRIYSQEY------KEDWTRVAGRTED----------ANELEEMGRSLVTCTYEHNTIWGIEKGVRYGCPLEDVTTGLQIQCRGWRSVYYNPKRKGFLGMTPTSLGQILVLYKRWTEGFLQISLSRYSPFLLG-HGKIKLGLQMGYSVCGFWAVNSFPTLYYVTIPSLCFLNGISLFPEKTSPW-FIPFA-YVMVAAYSCSLAESLQCGDSAVEWW 598          
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSJ (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. japonica GN=CSLF3 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.326e-18
Identity = 69/238 (28.99%), Postives = 110/238 (46.22%), Query Frame = 1
Query:    1 GTGAFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRS-LDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711
            GTG   RR  +YG+       Q NI  +    KFGNS   ++S  + L        S ++   ++E   V    ++  + WG  VG +Y    ED +TG  IH +GWRS YC     AF G A  +    + Q  RW+ G LE+ FS  NP++     +LQ  Q ++YL +  + + S+  L Y   P   +I +  ++ +     V+  L + ++  +   LE   AG+    +W N
Sbjct:  482 GTGCMFRRLALYGIDPPHWR-QDNITPEA--SKFGNSILLLESVLEALNQDRFATPSPVNDIFVNELEMVVSASFDKETDWGKGVGYIYDIATEDIVTGFRIHGQGWRSMYCTMEHDAFCGTAPINLTERLHQIVRWSGGSLEMFFSHNNPLIGG--RRLQPLQRVSYLNMTIYPVTSLFILLYAISPVMWLIPDEVYIQRPFTRYVVYLLVIILMIHMIGWLEIKWAGITWLDYWRN 714          
The following BLAST results are available for this feature:
BLAST of EY673892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CSLD2_ORYSJ2.185e-2131.11Cellulose synthase-like protein D2 OS=Oryza sativa... [more]
CSLD2_ORYSI2.185e-2131.11Cellulose synthase-like protein D2 OS=Oryza sativa... [more]
CSLD1_ORYSJ2.185e-2130.36Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CSLD1_ORYSI2.185e-2130.36Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CSLF9_ORYSJ3.727e-2131.20Probable mixed-linked glucan synthase 9 OS=Oryza s... [more]
CSLD6_ARATH6.358e-2134.66Putative cellulose synthase-like protein D6 OS=Ara... [more]
CSLD4_ORYSJ4.121e-2029.22Cellulose synthase-like protein D4 OS=Oryza sativa... [more]
CSLD3_ARATH4.121e-2030.22Cellulose synthase-like protein D3 OS=Arabidopsis ... [more]
CSLE2_ORYSJ2.671e-1931.09Cellulose synthase-like protein E2 OS=Oryza sativa... [more]
CSLF3_ORYSJ1.326e-1828.99Probable mixed-linked glucan synthase 3 OS=Oryza s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-004-D08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY673892 ID=EY673892; Name=EY673892; organism=Citrus sinensis; type=EST; length=929bp
GGTACAGGAGCTTTTCATAGACGAGATGTTGTATATGGTCTATGCCTCGA
TCAGATTGAACATCAAGGAAATATAGTGGAAGATGAGCTGCTGAAAAAAT
TCGGAAATTCAAAAGAATTCATCAAATCAGCTGCTCAGACTTTGGAAGGG
AAGACAGGAGGTTATTCAAGCAACATATCGAGATCGCTTGATGAAGCACA
CCGAGTTGCAGATTGTGGTTATGAGTACGGTAGTAGCTGGGGTGATGAGG
TGGGGTGCTTGTATGGCGCCACAGCAGAAGATAACTTAACTGGCTTGGTG
ATCCATTCAAAAGGCTGGAGATCAGGCTACTGCTTGCCGATCCCACATGC
CTTTCTTGGCTGTGCGTCGCCCAGCGGCCCTGCTGGGATGAGACAACAGA
AAAGGTGGGCCACGGGACTGCTTGAAATCCTATTCAGCAAACGTAACCCC
ATATTGGCTACTCTCATCGGGAAGCTCCAATTTCGACAATGTTTGGCTTA
TTTGTGGATCCTTACTTGGGGCTTGCGCTCAATTCCCGAGCTGTGCTACA
TTGCCCTTCCAGCTTATTGCATCATCACCAACTCCACTTTCCTGCCAAAG
GTCCAGGAACCAACCGTATTGATCCCTCTTGCACTTTTTGTGATCTACAA
ATTATATACTCTATTAGAGTACATTCAGGCTGGTTTAATCATCCGTTCAT
GGTGGGTTAACAATTGTATGGGCCGAAATTGTCACAACAAGTTGCATGGG
TTATTTGGTCTTGTAAACGCCCCGCCTCAACATTTTGGATTCCCCGAGGG
AGTTTTTGAAATTAACCCAAAAAATTTATCCAACCCCACCGAGGTCCAAG
AAAGTGAGGTTTGAACAATTCCCCTTTTTTTTTGTTCCCGGGCCGGAAAA
ATAATTCTGGGGGGCCCCCCCGTTGGTGG
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