EY673892
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.185e-21 Identity = 70/225 (31.11%), Postives = 108/225 (48.00%), Query Frame = 1 Query: 94 KKFGNSKEFIKSAA-------------QTLEGKTGGYSSNISRSLDEAHRVAD------CGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711 KKFGNS I S G+ G + + R L +A VA+ C YE + WG VG +YG+ ED +TG +H++GW+S YC+ AF G A + + Q RWATG +EI FS+ N +LA+ K++F Q +AYL + + SI + Y LPA + + + + + L + + + +LE +G+ + WW N Sbjct: 793 KKFGNSNFLINSIPIAEFQGRPLADHPGVKNGRPPG-ALTVPRDLLDASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS--RKMKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVRTLNVTFLTYLLVITLTMCMLAVLEIKWSGISLEEWWRN 1014
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSI (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.185e-21 Identity = 70/225 (31.11%), Postives = 108/225 (48.00%), Query Frame = 1 Query: 94 KKFGNSKEFIKSAA-------------QTLEGKTGGYSSNISRSLDEAHRVAD------CGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711 KKFGNS I S G+ G + + R L +A VA+ C YE + WG VG +YG+ ED +TG +H++GW+S YC+ AF G A + + Q RWATG +EI FS+ N +LA+ K++F Q +AYL + + SI + Y LPA + + + + + L + + + +LE +G+ + WW N Sbjct: 793 KKFGNSNFLINSIPIAEFQGRPLADHPGVKNGRPPG-ALTVPRDLLDASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS--RKMKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVRTLNVTFLTYLLVITLTMCMLAVLEIKWSGISLEEWWRN 1014
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.185e-21 Identity = 68/224 (30.36%), Postives = 104/224 (46.43%), Query Frame = 1 Query: 94 KKFGNSKEFIKSAA-------------QTLEGKTGGYSSNISRSLD-----EAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711 KKFGNS I S G+ G + +LD EA V C YE + WG VG +YG+ ED +TG +H++GW+S YC+ AF G A + + Q RWATG +EI FS+ N + A+ K++ Q +AYL + + S+ + Y LPA + + + + + L + + L +LE +G+ + WW N Sbjct: 748 KKFGNSSFLIDSIPVAEFQGRPLADHPSVKNGRPPGALTIPRETLDASIVAEAISVVSCWYEEKTEWGTRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALFAS--SKMKVLQRIAYLNVGIYPFTSVFLIVYCFLPALSLFSGQFIVQTLNVTFLTYLLIITITLCLLAMLEIKWSGIALEEWWRN 969
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 2.185e-21 Identity = 68/224 (30.36%), Postives = 104/224 (46.43%), Query Frame = 1 Query: 94 KKFGNSKEFIKSAA-------------QTLEGKTGGYSSNISRSLD-----EAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711 KKFGNS I S G+ G + +LD EA V C YE + WG VG +YG+ ED +TG +H++GW+S YC+ AF G A + + Q RWATG +EI FS+ N + A+ K++ Q +AYL + + S+ + Y LPA + + + + + L + + L +LE +G+ + WW N Sbjct: 748 KKFGNSSFLIDSIPVAEFQGRPLADHPSVKNGRPPGALTIPRETLDASIVAEAISVVSCWYEEKTEWGTRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALFAS--SKMKVLQRIAYLNVGIYPFTSVFLIVYCFLPALSLFSGQFIVQTLNVTFLTYLLIITITLCLLAMLEIKWSGIALEEWWRN 969
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CSLF9_ORYSJ (Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.727e-21 Identity = 78/250 (31.20%), Postives = 118/250 (47.20%), Query Frame = 1 Query: 1 GTGAFHRRDVVYGLCLDQIEHQGNIVEDELLK------KFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVAD------CGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTF-LPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711 GTG RR +YG + ED+ K ++GNS FI + + +S + SLDE +A+ C YE G+ WGD VG +Y ED +TG +H KGWRS YC P AF G A + + Q RW+ G LE+ FS+ P+LA +L+ Q +AY + + + ++ + Y LP + + F + K V +A+ + ++ L+E AGL + WW N Sbjct: 466 GTGCMFRRVALYGADPPRWRP-----EDDDAKALGCPGRYGNSMPFINTIPAAASQERS-IASPAAASLDETAAMAEVEEVMTCAYEDGTEWGDGVGWVYDIATEDVVTGFRLHRKGWRSMYCAMEPDAFRGTAPINLTERLYQILRWSGGSLEMFFSRNCPLLAGC--RLRPMQRVAYANMTAYPVSALFMVVYDLLPVIWLSHHGEFHIQKPFSTYVAYLVAVIAMIEVIGLVEIKWAGLTLLDWWRN 707
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.358e-21 Identity = 61/176 (34.66%), Postives = 90/176 (51.14%), Query Frame = 1 Query: 184 SLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711 +++EA V C YE + WG VG +YG+ ED +TG +H KGWRS YC+ P AF G A + + Q RWATG +EI FS+ N I A KL+ Q +AYL + + SI L Y LP + + + + ++ L + + +LE +G+ + WW N Sbjct: 651 TVNEAVNVISCWYEDKTEWGFNVGWIYGSVTEDVVTGFRMHEKGWRSFYCVTEPDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAIFAG--PKLKLLQRIAYLNVGIYPFTSIFILTYCFLPPLSLFSGHFVVETLTGSFLIYLLIITLSLCGLAVLEVKWSGISLEEWWRN 824
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 4.121e-20 Identity = 64/219 (29.22%), Postives = 104/219 (47.49%), Query Frame = 1 Query: 58 EHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCL-PIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711 E+QG +++D G + + L+ T + EA V C YE + WG +G +YG+ ED +TG +H++GWRS YC+ P AF G A + + Q RWATG +EI FS+ N + A+ +++ Q +AY + S+ L Y LPA + + + ++ + L + + L LLE +G+ + WW N Sbjct: 841 EYQGRLLQDTPGCHHGRPAGALAVPREPLDAAT----------VAEAIGVISCFYEEKTEWGRRIGWIYGSVTEDVVTGYRMHNRGWRSVYCVTPRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALFAS--PRMKLLQRVAYFNAGMYPFTSVFLLAYCLLPAVSLFSGKFIVQRLSATFLAFLLVITLTLCLLALLEIKWSGITLHEWWRN 1047
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 4.121e-20 Identity = 68/225 (30.22%), Postives = 105/225 (46.67%), Query Frame = 1 Query: 94 KKFGNSKEFIKSAA-------------QTLEGKTGGYSSNISRSLDEAHRVAD------CGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711 KKFGNS I S G+ G + I R L +A VA+ C YE + WG +G +YG+ ED +TG +H++GW+S YC+ AF G A + + Q RWATG +EI FS+ N A+ +++ Q +AYL + + S + Y LPA + + + + ++ L + + L LLE +G+ + WW N Sbjct: 768 KKFGNSTFLIDSIPVAEFQGRPLADHPAVQNGRPPG-ALTIPRELLDASTVAEAIAVISCWYEDKTEWGSRIGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAFFAS--PRMKILQRIAYLNVGIYPFTSFFLIVYCFLPALSLFSGQFIVQTLNVTFLVYLLIISITLCLLALLEIKWSGISLEEWWRN 989
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CSLE2_ORYSJ (Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.671e-19 Identity = 74/238 (31.09%), Postives = 105/238 (44.12%), Query Frame = 1 Query: 1 GTGAFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHR-VADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLY--TLLEYIQAGLIIRSWW 705 GTG FHRR+ LC G I E +++ + A +T + + L+E R + C YE+ + WG E G YG ED TGL I +GWRS Y P FLG S + KRW G L+I S+ +P L GK++ + Y W + S P L Y+ +P+ C + + P+ P IP A +V+ Y +L E +Q G WW Sbjct: 390 GTGCFHRREA---LC-------GRIYSQEY------KEDWTRVAGRTED----------ANELEEMGRSLVTCTYEHNTIWGIEKGVRYGCPLEDVTTGLQIQCRGWRSVYYNPKRKGFLGMTPTSLGQILVLYKRWTEGFLQISLSRYSPFLLG-HGKIKLGLQMGYSVCGFWAVNSFPTLYYVTIPSLCFLNGISLFPEKTSPW-FIPFA-YVMVAAYSCSLAESLQCGDSAVEWW 598
BLAST of EY673892 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSJ (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. japonica GN=CSLF3 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.326e-18 Identity = 69/238 (28.99%), Postives = 110/238 (46.22%), Query Frame = 1 Query: 1 GTGAFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRS-LDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFVIYKLYTLLEYIQAGLIIRSWWVN 711 GTG RR +YG+ Q NI + KFGNS ++S + L S ++ ++E V ++ + WG VG +Y ED +TG IH +GWRS YC AF G A + + Q RW+ G LE+ FS NP++ +LQ Q ++YL + + + S+ L Y P +I + ++ + V+ L + ++ + LE AG+ +W N Sbjct: 482 GTGCMFRRLALYGIDPPHWR-QDNITPEA--SKFGNSILLLESVLEALNQDRFATPSPVNDIFVNELEMVVSASFDKETDWGKGVGYIYDIATEDIVTGFRIHGQGWRSMYCTMEHDAFCGTAPINLTERLHQIVRWSGGSLEMFFSHNNPLIGG--RRLQPLQRVSYLNMTIYPVTSLFILLYAISPVMWLIPDEVYIQRPFTRYVVYLLVIILMIHMIGWLEIKWAGITWLDYWRN 714 The following BLAST results are available for this feature:
BLAST of EY673892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >EY673892 ID=EY673892; Name=EY673892; organism=Citrus sinensis; type=EST; length=929bpback to top |