EY673891

Overview
NameEY673891
Unique NameEY673891
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length986
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY673891 vs. ExPASy Swiss-Prot
Match: AT2A2_HUMAN (Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Homo sapiens GN=ATP2A2 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.366e-31
Identity = 73/190 (38.42%), Postives = 113/190 (59.47%), Query Frame = 3
Query:   48 GKSFRALSDTQREEIAEKISVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASY 617
            G+ F  L+ + + +         R  PS K  +V+ L+   ++ A+TGDG NDAPAL +A+IG+AMG  GT VAK +S++++ DDNF+++V  V  GR++Y N+++FI++ ++ NV  +V  F+ A       L  VQLLWVNL+ D L A AL   PP   +M + P   +EPLI+  ++   L    Y
Sbjct:  654 GREFDELNPSAQRDACLNARCFARVEPSHKSKIVEFLQSFDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCY 842          
BLAST of EY673891 vs. ExPASy Swiss-Prot
Match: AT2A2_FELCA (Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Felis catus GN=ATP2A2 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.366e-31
Identity = 73/190 (38.42%), Postives = 113/190 (59.47%), Query Frame = 3
Query:   48 GKSFRALSDTQREEIAEKISVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASY 617
            G+ F  LS + + +         R  PS K  +V+ L+   ++ A+TGDG NDAPAL +++IG+AMG  GT VAK +S++++ DDNF+++V  V  GR++Y N+++FI++ ++ NV  +V  F+ A       L  VQLLWVNL+ D L A AL   PP   +M + P   +EPLI+  ++   L    Y
Sbjct:  654 GREFDELSPSAQRDACLNARCFARVEPSHKSKIVEFLQSFDEITAMTGDGVNDAPALKKSEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCY 842          
BLAST of EY673891 vs. ExPASy Swiss-Prot
Match: AT2A2_CANFA (Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Canis familiaris GN=ATP2A2 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.366e-31
Identity = 73/190 (38.42%), Postives = 113/190 (59.47%), Query Frame = 3
Query:   48 GKSFRALSDTQREEIAEKISVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASY 617
            G+ F  LS + + +         R  PS K  +V+ L+   ++ A+TGDG NDAPAL +++IG+AMG  GT VAK +S++++ DDNF+++V  V  GR++Y N+++FI++ ++ NV  +V  F+ A       L  VQLLWVNL+ D L A AL   PP   +M + P   +EPLI+  ++   L    Y
Sbjct:  654 GREFDELSPSAQRDACLNARCFARVEPSHKSKIVEFLQSFDEITAMTGDGVNDAPALKKSEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNPKEPLISGWLFFRYLAIGCY 842          
BLAST of EY673891 vs. ExPASy Swiss-Prot
Match: AT2A1_BOVIN (Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Bos taurus GN=ATP2A1 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.366e-31
Identity = 73/190 (38.42%), Postives = 113/190 (59.47%), Query Frame = 3
Query:   48 GKSFRALSDTQREEIAEKISVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASY 617
            G+ F  L   ++ E   +     R  P+ K  +V+ L+   ++ A+TGDG NDAPAL +A+IG+AMG  GT VAK +S++++ DDNF+++V  V  GR++Y N+++FI++ ++ NV  +V  F+ A       L  VQLLWVNL+ D L A AL   PP   +M R P   +EPLI+  ++   +    Y
Sbjct:  654 GREFDDLPLAEQREACRRACCFARVEPTHKSKIVEYLQSFDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRTPKEPLISGWLFFRYMAIGGY 842          
BLAST of EY673891 vs. ExPASy Swiss-Prot
Match: AT1A2_RAT (Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus GN=Atp1a2 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.366e-31
Identity = 68/183 (37.16%), Postives = 117/183 (63.93%), Query Frame = 3
Query:   39 IIEGKSFRALSDTQREEIAEKIS--VMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITN 581
            ++ G   + ++  Q +EI    +  V  R+SP  KL++V+  +++G +VAVTGDG ND+PAL +ADIG+AMGI G++V+K+++D+I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    +  +++  +PL  V +L ++L  D + A++LA E     +M+R P   +   + N
Sbjct:  661 VVHGSDLKDMTSEQLDEILRDHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGIAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEAAESDIMKRQPRNSQTDKLVN 843          
BLAST of EY673891 vs. ExPASy Swiss-Prot
Match: AT1A2_MOUSE (Sodium/potassium-transporting ATPase subunit alpha-2 OS=Mus musculus GN=Atp1a2 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.366e-31
Identity = 68/183 (37.16%), Postives = 117/183 (63.93%), Query Frame = 3
Query:   39 IIEGKSFRALSDTQREEIAEKIS--VMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITN 581
            ++ G   + ++  Q +EI    +  V  R+SP  KL++V+  +++G +VAVTGDG ND+PAL +ADIG+AMGI G++V+K+++D+I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    +  +++  +PL  V +L ++L  D + A++LA E     +M+R P   +   + N
Sbjct:  661 VVHGSDLKDMTSEQLDEILRDHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGIAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEAAESDIMKRQPRNSQTDKLVN 843          
BLAST of EY673891 vs. ExPASy Swiss-Prot
Match: ATC1_DUNBI (Cation-transporting ATPase CA1 OS=Dunaliella bioculata GN=CA1 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.703e-31
Identity = 75/190 (39.47%), Postives = 111/190 (58.42%), Query Frame = 3
Query:   48 GKSFRALSDTQREEIAEKISVMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASY 617
            G+ F  +    +      + V+ R  P  KL LV+ L+ +G VVA+TGDG NDAPAL  ADIG+AMG  GT VAK ++D+++ DDNFA++V  V  GR ++ N ++FI++ ++ N+  +V  F+AA+      L  VQLLWVNL+ D L A AL        +M R P    +P++   ++   LI   Y
Sbjct:  670 GREFEEMGALGQAAATRNLVVLSRVEPMHKLRLVELLKAQGHVVAMTGDGVNDAPALLRADIGIAMG-SGTAVAKHAADMVLGDDNFATIVFAVAEGRVIFNNTKQFIRYMISSNIGEVVAIFLAALLGLPEVLTPVQLLWVNLVTDGLPATALGFNRADKDMMARGPRRVDDPIVNGWLFLRYLIIGMY 858          
BLAST of EY673891 vs. ExPASy Swiss-Prot
Match: AT1A1_RAT (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus GN=Atp1a1 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 7.448e-31
Identity = 70/200 (35.00%), Postives = 125/200 (62.50%), Query Frame = 3
Query:   39 IIEGKSFRALSDTQREEIAEKIS--VMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVL 632
            ++ G   + ++  + ++I    +  V  R+SP  KL++V+  +++G +VAVTGDG ND+PAL +ADIG+AMGI G++V+K+++D+I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    +  +++  +PL  V +L ++L  D + A++LA E     +M+R P   R P    ++   L+  A  Q+ ++
Sbjct:  664 VVHGSDLKDMTSEELDDILRYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIVGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQP---RNPKTDKLVNERLISMAYGQIGMI 860          
BLAST of EY673891 vs. ExPASy Swiss-Prot
Match: AT1A1_MOUSE (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Mus musculus GN=Atp1a1 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 7.448e-31
Identity = 70/200 (35.00%), Postives = 125/200 (62.50%), Query Frame = 3
Query:   39 IIEGKSFRALSDTQREEIAEKIS--VMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVL 632
            ++ G   + ++  + ++I    +  V  R+SP  KL++V+  +++G +VAVTGDG ND+PAL +ADIG+AMGI G++V+K+++D+I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    +  +++  +PL  V +L ++L  D + A++LA E     +M+R P   R P    ++   L+  A  Q+ ++
Sbjct:  664 VVHGSDLKDMTSEELDDILRYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIVGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQP---RNPKTDKLVNERLISMAYGQIGMI 860          
BLAST of EY673891 vs. ExPASy Swiss-Prot
Match: AT1A1_BUFMA (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Bufo marinus GN=ATP1A1 PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 7.448e-31
Identity = 72/200 (36.00%), Postives = 124/200 (62.00%), Query Frame = 3
Query:   39 IIEGKSFRALSDTQREEIAEKIS--VMGRSSPSDKLLLVQALRKRGDVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINFVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMQRSPVGRREPLITNIMWRNLLIQASYQVSVL 632
            +I G   + ++  Q ++I    +  V  R+SP  KL++V+  +++G +VAVTGDG ND+PAL +ADIG+AMGI G++V+K+++D+I+LDDNFAS+V  V  GR ++ N++K I + LT N+  +    +  ++   +PL  V +L ++L  D + A++LA E     +M+R P   R P    ++   L+  A  Q+ ++
Sbjct:  664 VIHGTDLKDMNADQIDDILRHHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGIAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIADIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQP---RNPKKDKLVNERLISMAYGQIGMI 860          
The following BLAST results are available for this feature:
BLAST of EY673891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 296
Match NameE-valueIdentityDescription
AT2A2_HUMAN4.366e-3138.42Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A2_FELCA4.366e-3138.42Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A2_CANFA4.366e-3138.42Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT2A1_BOVIN4.366e-3138.42Sarcoplasmic/endoplasmic reticulum calcium ATPase ... [more]
AT1A2_RAT4.366e-3137.16Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A2_MOUSE4.366e-3137.16Sodium/potassium-transporting ATPase subunit alpha... [more]
ATC1_DUNBI5.703e-3139.47Cation-transporting ATPase CA1 OS=Dunaliella biocu... [more]
AT1A1_RAT7.448e-3135.00Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A1_MOUSE7.448e-3135.00Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A1_BUFMA7.448e-3136.00Sodium/potassium-transporting ATPase subunit alpha... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-102-004-D07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY673891 ID=EY673891; Name=EY673891; organism=Citrus sinensis; type=EST; length=986bp
CCGGGAAATTCCCGGGGTCGACCCACAGCGTCCGAATAATCATTGAGGGA
AAGTCGTTCCGTGCCTTGTCAGATACACAAAGAGAAGAAATTGCAGAGAA
GATTTCGGTGATGGGACGGTCGTCTCCCAGTGATAAGCTTCTCCTCGTGC
AAGCATTGAGAAAGAGGGGAGATGTTGTAGCTGTAACTGGGGATGGCACT
AATGATGCTCCTGCCCTACATGAGGCAGACATTGGTCTGGCAATGGGTAT
TCAAGGAACCGAGGTTGCTAAAGAGAGCTCAGATATTATTATCTTGGACG
ACAATTTTGCTTCAGTTGTGAAGGTTGTCAGATGGGGTCGTTCTGTATAT
GCAAATATCCAGAAATTCATCCAGTTTCAGCTTACTGTCAATGTCGCAGC
TCTCGTCATTAATTTTGTGGCTGCTGTTTCCTCTGGTGATGTTCCCCTCA
ATGCAGTGCAGCTTCTCTGGGTTAACCTCATCATGGATACCCTGGGAGCC
TTAGCCTTGGCTACTGAACCACCAACTGATCACCTGATGCAGAGGTCCCC
AGTTGGTCGAAGAGAACCTCTTATAACTAATATAATGTGGAGGAATCTCT
TAATACAGGCTTCCTACCAAGTAAGTGTCCTGGCTTGTCCTGAATTTTTC
AAGGGGAAGAGGATTCTGAACCTGGGAGAGTGGATTCCATTGCCCATTCC
ACAAAAGAAAAAAAAACTCTGATATTCAATTTCTTTTTGTCCTTTTGCCA
GAATCTTTAATGAATTTAATGGTCGGAAGGCCGGTGAAAAAAAATATTTT
TCGGAGGAATTACTAAAAACCCGTCTTTTTATGGGGGAAATGGGCAGTAA
ATTCTTGGATTTCAGAAAATTTATCATTTCGTTTTCTTGGGGGAAGATTG
GCATGCAATAAAATAGGCTAAATTTGGGAAGAAACGGGAATATTTTTCCT
GTTTCAATTTTGTGGTTTATTAAGTTTTGGCACCCC
back to top