EY673881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_METTP (50S ribosomal protein L18P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rpl18p PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.993e-20 Identity = 65/183 (35.52%), Postives = 92/183 (50.27%), Query Frame = 1 Query: 58 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKY 606 RY+V ++RRREG+T+Y R RLI K R VVR N +IT Q+I A + GD L + + EL YG + N AAY TGLL +++L + Y+ +LD+GL + G+RV+ ALKG +D G+D+PHS + F D ++ EV R Y Sbjct: 6 RYRVPFRRRREGRTNYHVRYRLILSRKP-------RVVVRKGNANITIQLIIAELKGDRTLLTVSSKELRNYGFQHSTGNVPAAYLTGLLFGKKMLAL----------------GYN----------EGILDIGLHSNSRGSRVYAALKGVVDAGVDVPHSPEVF----PDDSRIRGEVIRDY 151
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_METMJ (50S ribosomal protein L18P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl18p PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.993e-20 Identity = 62/162 (38.27%), Postives = 83/162 (51.23%), Query Frame = 1 Query: 58 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSE 543 RY V ++RR EGKTDY R+ L++ TP R VVR TN+ I Q++ + GD L +AY+ EL YG E + AAY TG+L A V+A Y A+LD+GL + G RVF ALKG++D GLD+P+ E Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLLSS-----GTP--RMVVRKTNRQIIVQLVVPEVEGDSTLVAAYSAELAGYGYEGSTASTPAAYLTGMLFA----------------VKALNAGYG----------EAILDIGLARAKPGARVFAALKGAVDAGLDVPYGE 134
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_METPE (50S ribosomal protein L18P OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rpl18p PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.558e-19 Identity = 68/192 (35.42%), Postives = 95/192 (49.48%), Query Frame = 1 Query: 58 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAY 633 RY V ++RRREGKTDY R +LI ++ R VVR TN+ I Q+I A + GD L +A + EL YG + +N AAY TG+L A V+A D+ A+LD+GL + T G +VF ALKG+++ GLD+PH E+ + + G H+AAY Sbjct: 6 RYFVPFRRRREGKTDYYKRGKLIVAEQP-------RMVVRKTNRHIIVQMIVAEMEGDKTLVTANSAELLDYGYKGSTSNTPAAYLTGMLFA----------------VKALNADHPA----------AILDIGLNRATYGAKVFAALKGAVEAGLDVPHGEEILPADER-------------VKGEHIAAY 151
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_HALMA (50S ribosomal protein L18P OS=Haloarcula marismortui GN=rpl18p PE=1 SV=3) HSP 1 Score: 97.0561 bits (240), Expect = 1.558e-19 Identity = 70/217 (32.26%), Postives = 97/217 (44.70%), Query Frame = 1 Query: 58 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEE------DPKKYQSHFCEI 690 RY+V +RRRE +TDY R+RL+ K R V R +NK + AQ+++ GD LASA++ +L YG E N +AY TGLL R E VE A+LD+GL T G++VF +G++D GLDIPH++ A + + G H+A Y L E D HF E+ Sbjct: 6 RYKVPMRRRREARTDYHQRLRLLKSGKP-------RLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTGLLAGLRA---------QEAGVE-----------------EAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHNDDVLADWQRTR-------------GAHIAEYDEQLEEPLYSGDFDAADLPEHFDEL 176
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_SULTO (50S ribosomal protein L18P OS=Sulfolobus tokodaii GN=rpl18p PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.657e-19 Identity = 71/219 (32.42%), Postives = 105/219 (47.95%), Query Frame = 1 Query: 46 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHEL-PRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEEDPKKYQSHFCEILKK 699 A+ Y+VKY+RRREGKT+Y R + + R VVR TNK I AQI + GD+++ +A++ EL ++G + L N AAY TG LL R LK G E A+ D+GL G+R+F A+KG++D GL IP D + I G H+A+Y + L E+P+ ++ F + L++ Sbjct: 2 AHGPNYRVKYRRRREGKTNYYKRYTYVINNTT-------RLVVRLTNKYIIAQIAKFNPKGDVIVVAAHSMELAKKFGWKGDLNNTPAAYLTGYLLGVRALK--------AGIKE------------------AVADIGLFVPVKGSRIFTAIKGAIDAGLSIPVG--------------DLGIKEDRIKGVHIASYAQKLEAENPELFKRLFSKYLER 173
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_PYRCJ (50S ribosomal protein L18P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl18p PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.657e-19 Identity = 67/214 (31.31%), Postives = 100/214 (46.73%), Query Frame = 1 Query: 58 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEEDPKKYQSHFCEILKK 699 RY+V ++RRREG T+YR R +L+ K R VVR TNK + AQI+ A GD + L ++G + N +AAY GL++ Y+ + E A+LD+GL + T G RVF +KG +D G+++PH E + + I G HVA Y + L EE P+ Y++ F L++ Sbjct: 6 RYKVPFRRRREGVTNYRKRRKLLLSRKP-------RLVVRKTNKHLIAQIVIARPHGDETVVGLDTRVLSKFGWKGDENNTSAAYLLGLIVG------------YKARAKGIKE--------------AILDIGLHRPTPGARVFAVMKGVIDAGVEVPHGE-------------EVVPSEERIRGEHVAEYAKRLKEEAPEAYKARFSRYLQR 173
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_METLZ (50S ribosomal protein L18P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl18p PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.657e-19 Identity = 63/162 (38.89%), Postives = 83/162 (51.23%), Query Frame = 1 Query: 58 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSE 543 RY V+++RRREG+TDY R RLI +N R VVR TN+ I Q+I+A + GD L + EL +G + L N AAY TG+L A R K A YEG + D+GL +TG RVF A+KG++D G D+P E Sbjct: 6 RYFVQFRRRREGRTDYYQRQRLIVSGRN-------RMVVRKTNRHIIIQLIAAQMDGDYTLVHVNSRELVNFGYKGYLGNTPAAYLTGMLFAVRAQK-----AGYEGGI---------------------ADIGLQVASTGARVFAAIKGAVDAGFDVPVGE 134
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_NANEQ (50S ribosomal protein L18P OS=Nanoarchaeum equitans GN=rpl18p PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.471e-19 Identity = 68/218 (31.19%), Postives = 104/218 (47.71%), Query Frame = 1 Query: 46 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEEDPKKYQSHFCEILKK 699 A+ RY+V ++RRREGKT YR R++L+ K R VVR N +I AQ++ GD V+ + +++ L +YG + N +AY GL+ LK R A+LD+G K+T GN ++ LKG+LD GL+IPHSE + I G H+A Y + +++E+ + Y+ F LK+ Sbjct: 2 AHGPRYRVPFRRRREGKTVYRKRLKLLLSGKP-------RLVVRRFNSNILAQLVEYDPKGDRVIFTIHSNVLKKYGWKGHRGNLPSAYLVGLIAGYEALK--------------------------RGYKEAVLDIGRYKSTKGNALYAVLKGALDAGLNIPHSETILPSEDR-------------IRGEHIANYAK-MLKENEELYKKQFSRYLKE 172
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_PYRAB (50S ribosomal protein L18P OS=Pyrococcus abyssi GN=rpl18p PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.533e-19 Identity = 74/219 (33.79%), Postives = 105/219 (47.95%), Query Frame = 1 Query: 46 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPR-YGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEEDPKKYQSHFCEILKK 699 A+ RY+V ++RRREGKT+YR R++L+ K R VVR + AQII GD L SA+ EL R +G + N +AY GLL+ + K +E A+LD+GL G+ VF LKG++D GL++PHS + F E +R I G H+A Y R L E+D +K++ F L+K Sbjct: 2 AHGPRYRVPFRRRREGKTNYRKRLKLLKSGKP-------RLVVRKSLNHHIAQIIVYDPKGDRTLVSAHTRELIRDFGWKGHCGNTPSAYLLGLLIGYKAKK---------AGIE-----------------EAILDIGLHPPVRGSSVFAVLKGAVDAGLNVPHSPEIF-----------PEDYR--IRGEHIAEYARMLKEQDEEKFRRQFGGYLEK 174
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_THEON (50S ribosomal protein L18P OS=Thermococcus onnurineus (strain NA1) GN=rpl18p PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.920e-19 Identity = 74/219 (33.79%), Postives = 103/219 (47.03%), Query Frame = 1 Query: 46 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPR-YGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEEDPKKYQSHFCEILKK 699 A+ RY+V ++RRREGKT+Y R+ L+ K R VVR + AQI+ GD + SA+ EL R +G + N +AY GLL+ + K G D A+LD+GL T G+ VF LKG++D GL++PHSE ++ E +R I G H+A Y + L EED KY+ F L K Sbjct: 2 AHGPRYRVPFRRRREGKTNYHKRLALLKSGKP-------RLVVRKSLNHHIAQIVVYDPKGDKTIVSAHTRELMRDFGWKGHGGNTPSAYLLGLLIGYKAKK--------------AGID------------EAILDIGLHPPTRGSSVFAVLKGAVDAGLNVPHSE-----------EIYPEDYR--ITGEHIANYAKALKEEDEGKYRKQFSSYLVK 174 The following BLAST results are available for this feature:
BLAST of EY673881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >EY673881 ID=EY673881; Name=EY673881; organism=Citrus sinensis; type=EST; length=924bpback to top |