EY673881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_STAMF (50S ribosomal protein L18P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl18p PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.010e-18 Identity = 72/215 (33.49%), Postives = 102/215 (47.44%), Query Frame = 1 Query: 58 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHEL-PRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEEDPKKYQSHFCEILKK 699 RY+V +RRREGKT+Y R +++ RFVVR T K I QI++A GDI +A+A++ EL +YG GL N AAY TGLL A R LK G Y+V D+GL T G +VF A+K + D GL +P E+ + I G H+A++ + L E P+ Y+ F + + + Sbjct: 6 RYKVPKRRRREGKTNYYKRYKMVLSGHP-------RFVVRKTLKHIIVQIVTAKPEGDITIAAAHSRELYKKYGWMGGLGNTPAAYLTGLLAALRGLK--------------AGIKYAVP------------DIGLHVPTRGAKVFAAIKAANDVGLKVPVGEEVVPSDDR-------------IRGEHIASWAKMLQEASPEAYERFFSKYISR 174
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_METS5 (50S ribosomal protein L18P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl18p PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.319e-18 Identity = 67/218 (30.73%), Postives = 96/218 (44.04%), Query Frame = 1 Query: 46 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEEDPKKYQSHFCEILKK 699 A+ Y+VKY+RRREGKT+Y R + + R VVR TNK + Q + GDI +A+A++ EL ++G + N A Y TG L R A+ G A+ D+GL T G R+F LKG +D G+ +P D V+ + G H+A Y + L +EDP KY+ F L + Sbjct: 2 AHGPNYKVKYRRRREGKTNYYRRYTYVLNRSD-------RVVVRLTNKYVIVQFVKFDPKGDITVAAAHSRELMKFGWKGDENNSTACYLTGYLAGLR--------AKKAGMTSASA------------------DLGLFTPTKGARIFYVLKGVIDSGVKVPMG--------------DVGVNNDRLAGKHIAEYAKKLEQEDPDKYRGLFSRYLAR 172
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_THEPD (50S ribosomal protein L18P OS=Thermofilum pendens (strain Hrk 5) GN=rpl18p PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.722e-18 Identity = 68/208 (32.69%), Postives = 101/208 (48.56%), Query Frame = 1 Query: 58 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEEDPKKYQSHF 681 RY+V KRRREGKT+Y R +LI K R VVR ++ QI A+ GD+V+ASA+++EL +YG + N A Y G L A++ LK +G E A++D+GL + +RVF A+KG+LD GL IP + +D + + G H+A Y + L E +P+ ++ F Sbjct: 6 RYRVPLKRRREGKTNYYKRRKLIISGKP-------RLVVRVLSRTAIVQIAKATPKGDVVIASAHSNELKKYGWKGYRRNTPALYLLGFLAAKKALK--------QGVTE------------------AIVDIGLHRPVKASRVFAAVKGALDAGLKIPVGD---GVLPEDDR----------VRGEHIANYAKMLKESNPELFKLRF 167
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_THEGJ (50S ribosomal protein L18P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl18p PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.722e-18 Identity = 73/215 (33.95%), Postives = 103/215 (47.91%), Query Frame = 1 Query: 58 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPR-YGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEEDPKKYQSHFCEILKK 699 RY+V ++RRREGKT+Y R++L+ + K R VVR + AQII + GD + SA+ EL R +G + N +AY GLL+ + K +E A+LD+GL T G+ VF LKG++D GL++PHSE+ F E +R I G HVA Y + L +ED Y+ F L K Sbjct: 6 RYRVPFRRRREGKTNYHKRLKLL-------KSKKPRLVVRKSLNHHIAQIIVYNPKGDRTIVSAHTRELIRDFGWKGHTGNTPSAYLLGLLIGYKAKK---------AGIE-----------------EAILDIGLHPPTRGSSVFAVLKGAVDAGLNVPHSEEIF-----------PEDYR--IRGEHVAEYAKALKQEDETLYRKQFGGYLVK 174
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_PYRHO (50S ribosomal protein L18P OS=Pyrococcus horikoshii GN=rpl18p PE=3 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.722e-18 Identity = 72/219 (32.88%), Postives = 104/219 (47.49%), Query Frame = 1 Query: 46 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPR-YGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEEDPKKYQSHFCEILKK 699 A+ RY+V ++RRREGKT+YR R++L+ K R VVR + AQII GD L SA+ EL R +G + N +AY GLL+ + K +E A+LD+GL G+ +F LKG++D GL++PHS + F E +R I G H+A Y R L E+D +++ F L+K Sbjct: 2 AHGPRYRVPFRRRREGKTNYRKRLKLLKSGKP-------RLVVRKSLNHHIAQIIVYDPKGDRTLVSAHTRELIRDFGWKGHCGNTPSAYLLGLLIGYKAKK---------AGIE-----------------EAILDIGLHPPVRGSSIFAVLKGAIDAGLNVPHSPEIF-----------PEDYR--IRGEHIAEYARMLKEQDEDRFRRQFGGYLEK 174
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_PYRKO (50S ribosomal protein L18P OS=Pyrococcus kodakaraensis GN=rpl18p PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.250e-18 Identity = 74/219 (33.79%), Postives = 105/219 (47.95%), Query Frame = 1 Query: 46 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPR-YGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEEDPKKYQSHFCEILKK 699 A+ RY+V ++RRREGKT+Y R++L+ + K R VVR T AQI+ GD L SA+ EL R +G + N +AY GLL+ + A+ G E A+LD+GL T G+ +F LKG++D GL++PHSE ++ E +R I G H+A Y + L EED Y+ F L K Sbjct: 2 AHGPRYRVPFRRRREGKTNYHKRLKLL-------KSKKPRLVVRKTLNHHIAQIVVYDPKGDKTLVSAHTMELMRDFGWKGHGGNTPSAYLLGLLIGYK--------AKQAGIEE------------------AILDIGLHPPTRGSSIFAVLKGAVDAGLNVPHSE-----------EIYPEDYR--INGEHIANYAKALKEEDEALYRKQFSGYLVK 174
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_THESM (50S ribosomal protein L18P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rpl18p PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.938e-18 Identity = 70/219 (31.96%), Postives = 105/219 (47.95%), Query Frame = 1 Query: 46 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPR-YGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEEDPKKYQSHFCEILKK 699 A+ RY+V ++RRREGKT+Y R+ L+ K R VVR T AQI+ + GD + SA+ EL R +G + N +AY GLL+ + L E +E A+LD+GL T G+ +F LKG++D GL++PHSE+ + G + I G H+A Y + +++ED + Y+ F L K Sbjct: 2 AHGPRYRVPFRRRREGKTNYHKRLALLKSGKP-------RLVVRKTLNHHVAQIVLYAPEGDKTVVSAHTRELMRDFGWKGHGGNTPSAYLLGLLIGYKAL---------EKGIE-----------------EAILDIGLHPPTKGSSIFAVLKGAVDAGLNVPHSEEIYPG-------------EERINGKHIAEYAK-MLKEDDENYKKQFGGYLVK 173
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_IGNH4 (50S ribosomal protein L18P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rpl18p PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.837e-18 Identity = 70/215 (32.56%), Postives = 102/215 (47.44%), Query Frame = 1 Query: 58 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPR-YGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEEDPKKYQSHFCEILKK 699 RY+V +RRREGKT+Y R + K RFVVR +NK + Q+I + GD V+A+A++ EL + YG + + A Y TG+L A R K G Y+V D+GL K T G RVF A+K + D GL++P D I G H+A+Y +L E+P++YQ F ++L++ Sbjct: 6 RYKVPRRRRREGKTNYYKRYTMALSRKP-------RFVVRKSNKYVWVQVIEFAPEGDKVIAAAHSKELEKKYGWKGYGNSLPAVYLTGMLAALRAKK--------------AGIQYAVP------------DIGLHKPTKGARVFAAIKAANDVGLEVPVG--------------DVVPDESRIRGEHIASYAESLKNENPEEYQRRFAKLLER 173
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_UNCMA (50S ribosomal protein L18P OS=Uncultured methanogenic archaeon RC-I GN=rpl18p PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 5.011e-18 Identity = 74/218 (33.94%), Postives = 107/218 (49.08%), Query Frame = 1 Query: 58 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPR-YGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEEDPKK---YQSHFCEILKK 699 RY+V ++RRREGKTDY R++LI K R VVR T+ + AQI+ GD VLA+A + EL + +G + N +AAY TGLL+ + E VE A+LD+GL + G+RV+ ALKG++D GL++P SE F D + ++I G + Y T E++ K +HF E+ K Sbjct: 6 RYKVAFRRRREGKTDYHQRLKLIVSRKP-------RLVVRRTSSQVIAQILVTRPEGDKVLAAATSAELAKTFGYKGSGKNTSAAYLTGLLIGYKA---------QEAGVE-----------------EAILDMGLRENRAGSRVYAALKGAVDSGLEVPCSEDVFPS--------DDRIRGEHIAGNTASKY--TQYEKNGLKAADLPAHFDEVKGK 180
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_PYRFU (50S ribosomal protein L18P OS=Pyrococcus furiosus GN=rpl18p PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.545e-18 Identity = 72/219 (32.88%), Postives = 103/219 (47.03%), Query Frame = 1 Query: 46 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPR-YGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEEDPKKYQSHFCEILKK 699 A+ RY+V ++RRREGKT+YR R++L+ K R VVR + AQII GD L SA+ EL R +G + N +AY GLL+ + A+ G E A+LD+GL G+ VF LKG++D GL++PHS + F + I G H+A Y + L E+D +K++ F L K Sbjct: 2 AHGPRYRVPFRRRREGKTNYRKRLKLLKSGKP-------RLVVRKSLNHHIAQIIVYDPKGDRTLVSAHTRELIRDFGWKGHCGNTPSAYLLGLLIGYK--------AKQAGIEE------------------AILDIGLHPPVRGSSVFAVLKGAVDAGLNVPHSPEIFPDEYR-------------IRGEHIAEYAKMLKEQDEEKFRRQFGGYLVK 174 The following BLAST results are available for this feature:
BLAST of EY673881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >EY673881 ID=EY673881; Name=EY673881; organism=Citrus sinensis; type=EST; length=924bpback to top |