EY673881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_NATPD (50S ribosomal protein L18P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl18p PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.545e-18 Identity = 66/220 (30.00%), Postives = 97/220 (44.09%), Query Frame = 1 Query: 58 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEE------DPKKYQSHFCEILKK 699 RY V +RRRE +T+Y R+RL+ K R V R +N AQ++ GD +ASA + +L +G E N AAY TGLL +R ++ G D A+LD+GL T GN+VF +G +D GL++PH+E FA + + G H+A Y L + D + HF E+ ++ Sbjct: 6 RYTVPMRRRREARTNYHQRLRLLKSGKP-------RLVARKSNNQTKAQLVVTGPQGDETVASATSADLEAFGWEAPTGNLPAAYLTGLLAGKRAIE--------------AGLD------------EAVLDIGLNTATPGNKVFAVQEGVIDAGLEVPHNEDVFADWQRTR-------------GAHIAEYAEQLEDGLYSGDFDATELPDHFDEVRER 179
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_METAC (50S ribosomal protein L18P OS=Methanosarcina acetivorans GN=rpl18p PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.904e-17 Identity = 62/186 (33.33%), Postives = 97/186 (52.15%), Query Frame = 1 Query: 58 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRF-----------AGFSKDSKQL 582 RY+V ++RRREG+T+Y R++L+ ++ R VVR +++++ Q+I+ + GDI +SA ++EL +YG N AAY TGLL LK L+ YEG + LD+GL ++ G+RV+ ALKG +D G +IP S + F AG+ ++S L Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSRQD-------RVVVRKSSRNVQIQLIAPTPDGDITYSSAVSNELAKYGYTGATGNTTAAYLTGLLFG---LKSLQKG--YEGGI---------------------LDIGLQASSAGSRVYAALKGVVDSGFEIPCSPEVFPPDERIRGEHIAGYREESSDL 158
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_HALWD (50S ribosomal protein L18P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl18p PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.487e-17 Identity = 65/208 (31.25%), Postives = 93/208 (44.71%), Query Frame = 1 Query: 58 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEEDPKKYQSHF 681 RY+V +RRRE +TDY R+RL+ K R V R +N+ + AQ+I+ GD +A + L YG E N +AY TG L R ++ G D A+LD+GL T GN+VF +G++D G+ IPH+E A +S++ G H+AAY + D Y S F Sbjct: 6 RYKVPMRRRREVRTDYHQRLRLLKSGKP-------RLVARVSNRHVRAQLITPGPDGDETHVAASSEHLSEYGWEAPTGNLPSAYLTGYLAGMRAIE--------------AGLD------------EAVLDIGLNTATPGNKVFVVQEGAIDAGVSIPHNESVLADWSRNR-------------GEHIAAYAE---QRDEPLYNSDF 164
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_HALLT (50S ribosomal protein L18P OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rpl18p PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.487e-17 Identity = 66/218 (30.28%), Postives = 96/218 (44.04%), Query Frame = 1 Query: 58 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEE------DPKKYQSHFCEIL 693 RY+V +RRRE +TDY R+RL+ K R V R +N + AQ+++ GD A+A + EL YG + N +AY TG L R + DA + A+LD+GL T GN+ F +G++D GL+IPH++ A +S+ G H+AAY L E D HF ++L Sbjct: 6 RYKVPMRRRREVRTDYHQRLRLLKSGKP-------RLVARVSNAHVRAQLVTPGSDGDETHAAASSEELGEYGWDAPTGNLPSAYLTGYLAGARAV-----DAGLD---------------------EAVLDIGLNTATPGNKTFAVQEGAIDAGLEIPHNDDVLADWSRTR-------------GEHIAAYAEQLDEPLYSGDFDAADLPEHFDDVL 177
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_METBF (50S ribosomal protein L18P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl18p PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.242e-17 Identity = 63/206 (30.58%), Postives = 102/206 (49.51%), Query Frame = 1 Query: 58 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEEDPKKYQS 675 RY+V ++RRREG+T+Y R++L+ ++ R VVR + +++ Q+I+ + GDI +SA + EL +YG N AAY TGLL + LK YEG + LD+GL ++ G+RV+ ALKG +D G ++P S + F + I G H+A Y R + P+++++ Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLISKQD-------RVVVRKSARNVQIQLIAPTPEGDITYSSAVSSELAKYGYTGVTGNTTAAYLTGLLFGLKSLK-----KGYEGGI---------------------LDIGLQASSAGSRVYAALKGIVDSGFEVPCSPEVFPSDER-------------IRGEHIAEY-REESSDLPEQFEA 164
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_METMA (50S ribosomal protein L18P OS=Methanosarcina mazei GN=rpl18p PE=3 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 7.237e-17 Identity = 64/206 (31.07%), Postives = 102/206 (49.51%), Query Frame = 1 Query: 58 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEEDPKKYQS 675 RY+V ++RRREG+T+Y R++L+ ++ R VVR + +++ Q+++ + GDI +SA + EL +YG N AAY TGLL LK L+ YEG + LD+GL ++ G+RV+ ALKG +D G +IP S F + I G H+A Y R + P+++++ Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSGQD-------RVVVRKSARNVQIQLLAPTPEGDITYSSAVSSELAKYGYTGATGNTTAAYLTGLLFG---LKSLQKG--YEGGI---------------------LDIGLQASSAGSRVYAALKGIVDSGFEIPCSSDVFPSDER-------------IRGEHIAEY-REESSDLPEQFEA 164
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_SULSO (50S ribosomal protein L18P OS=Sulfolobus solfataricus GN=rpl18p PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.612e-16 Identity = 66/214 (30.84%), Postives = 92/214 (42.99%), Query Frame = 1 Query: 61 YQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHEL-PRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEEDPKKYQSHFCEILKK 699 Y+VK +RRREGKT+Y R + + RF+VR TNK + QI GDI++ASA++ EL ++G + N AAY TG L R +K R + D+GL + GNRVF +KG++D GL IP D + I G H+A Y L E+ Y F L++ Sbjct: 10 YKVKPRRRREGKTNYYKRYVYVISKQT-------RFIVRITNKYVIVQIAKIDPKGDIMIASAHSAELAKKFGWKGDENNTPAAYLTGYLAGLRAIK--------------------------RGVTECVADIGLHVPSKGNRVFYVIKGAIDAGLKIPIG--------------DISIENDRIKGEHIAKYAEKLKSENSDLYSKLFSRYLQR 176
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_DESK1 (50S ribosomal protein L18P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rpl18p PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.750e-16 Identity = 71/230 (30.87%), Postives = 102/230 (44.35%), Query Frame = 1 Query: 58 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHEL-PRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEE---------------DPKKYQSHFCEILKK 699 RY+V +RRREGKT+Y R R+I RF+VR T I Q+ +A GD+++A+A+++EL R+G + G N +AAY TGLL A L+ LE EY A+ D+GL + G VF A+K + D GL +P + + I G H+A+Y + L E P+ SHF E+ K Sbjct: 6 RYKVPRRRRREGKTNYYKRYRMIVSGHP-------RFIVRKTLNYIWVQVATARPEGDVIIAAAHSNELRKRFGWKAGTCNTSAAYLTGLLAA---LRALEKGVEY-----------------------AVPDIGLHRPVKGALVFAAIKAANDAGLKVPMGG-------------EVAPSEERIRGEHIASYAKILRENGLLEKRFSRYLANGLQPEDLPSHFEEVKNK 189
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_METST (50S ribosomal protein L18P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl18p PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.591e-16 Identity = 62/201 (30.85%), Postives = 94/201 (46.77%), Query Frame = 1 Query: 61 YQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEEDPK 663 Y+V++KRRREGKT+Y R +L++ DK R VVR T+ Q++ GD L SA + L +G N +AAY TG L ++ L E Y +LD+G+ + G +++ LKG+LD GL IPH++ + +DS+ I G H+A Y + M++D K Sbjct: 7 YKVQFKRRREGKTNYNKRYKLVDLDKT-------RMVVRITSNHTITQLVKIGENGDETLVSATSKNLKEFGWLGNGKNTSAAYLTGYLFGKKAL----------------NEGYD----------ETILDIGVQPSIKGTKIYAVLKGALDAGLYIPHND---SILPEDSR----------IRGEHIAQYAES-MDDDEK 160
BLAST of EY673881 vs. ExPASy Swiss-Prot
Match: RL18_SULIN (50S ribosomal protein L18P OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl18p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 6.126e-16 Identity = 70/231 (30.30%), Postives = 101/231 (43.72%), Query Frame = 1 Query: 61 YQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHEL-PRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEE-----------------DPKKYQSHFCEILKK 699 Y++K++RRREGKT+Y R + + + RF+VR TNK + QI GDI++ASA++ EL ++ + N +AY TG L A R +K +G E + D+GL + GN+VF A+KG++D GL IP D + I G H+A Y L E +P+ SHF EIL K Sbjct: 7 YKIKHRRRREGKTNYYKRYVYVI-------SKQIRFIVRITNKYVIVQIAKIDPKGDIMVASAHSSELTKKFEWKGDENNTPSAYLTGYLAALRAVK--------KGVTE------------------CVADIGLHVPSKGNKVFYAIKGAIDAGLKIPIG--------------DISIENDRIKGEHIAKYAEKLKSENLDLYNKLFSRYLGRGLNPENLPSHFEEILNK 190 The following BLAST results are available for this feature:
BLAST of EY673881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >EY673881 ID=EY673881; Name=EY673881; organism=Citrus sinensis; type=EST; length=924bpback to top |