EY673880

Overview
NameEY673880
Unique NameEY673880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length795
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDH_ECO5E (Malate dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=mdh PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.030e-42
Identity = 96/185 (51.89%), Postives = 123/185 (66.49%), Query Frame = 2 
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEKGWLGKGKKRINRETISKGIRFCREMIN 559
            KK G YD  +L GVT LD++R+NTFVAE+ G  P EV+VPV+GGH+GVTILPLLSQV P  S T  E+  LT RIQN GTEVVEAK G GSATLSM  AAA+F  + +R L+G+ GV+ECAYV        FF+  + L + G+EE  S+G L+ +E+  L +G      +T+ K I    E +N
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNAL-EGM----LDTLKKDIALGEEFVN 311
[Close]
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDH_ECO57 (Malate dehydrogenase OS=Escherichia coli O157:H7 GN=mdh PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.030e-42
Identity = 96/185 (51.89%), Postives = 123/185 (66.49%), Query Frame = 2 
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEKGWLGKGKKRINRETISKGIRFCREMIN 559
            KK G YD  +L GVT LD++R+NTFVAE+ G  P EV+VPV+GGH+GVTILPLLSQV P  S T  E+  LT RIQN GTEVVEAK G GSATLSM  AAA+F  + +R L+G+ GV+ECAYV        FF+  + L + G+EE  S+G L+ +E+  L +G      +T+ K I    E +N
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNAL-EGM----LDTLKKDIALGEEFVN 311
[Close]
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDH_ECO55 (Malate dehydrogenase OS=Escherichia coli (strain 55989 / EAEC) GN=mdh PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.030e-42
Identity = 96/185 (51.89%), Postives = 123/185 (66.49%), Query Frame = 2 
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEKGWLGKGKKRINRETISKGIRFCREMIN 559
            KK G YD  +L GVT LD++R+NTFVAE+ G  P EV+VPV+GGH+GVTILPLLSQV P  S T  E+  LT RIQN GTEVVEAK G GSATLSM  AAA+F  + +R L+G+ GV+ECAYV        FF+  + L + G+EE  S+G L+ +E+  L +G      +T+ K I    E +N
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQSAL-EGM----LDTLKKDIALGEEFVN 311
[Close]
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDH_ECO45 (Malate dehydrogenase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=mdh PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.030e-42
Identity = 96/185 (51.89%), Postives = 123/185 (66.49%), Query Frame = 2 
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEKGWLGKGKKRINRETISKGIRFCREMIN 559
            KK G YD  +L GVT LD++R+NTFVAE+ G  P EV+VPV+GGH+GVTILPLLSQV P  S T  E+  LT RIQN GTEVVEAK G GSATLSM  AAA+F  + +R L+G+ GV+ECAYV        FF+  + L + G+EE  S+G L+ +E+  L +G      +T+ K I    E +N
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNAL-EGM----LDTLKKDIALGEEFVN 311
[Close]
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDH_ECO27 (Malate dehydrogenase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=mdh PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.030e-42
Identity = 96/185 (51.89%), Postives = 123/185 (66.49%), Query Frame = 2 
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEKGWLGKGKKRINRETISKGIRFCREMIN 559
            KK G YD  +L GVT LD++R+NTFVAE+ G  P EV+VPV+GGH+GVTILPLLSQV P  S T  E+  LT RIQN GTEVVEAK G GSATLSM  AAA+F  + +R L+G+ GV+ECAYV        FF+  + L + G+EE  S+G L+ +E+  L +G      +T+ K I    E +N
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNAL-EGM----LDTLKKDIALGEEFVN 311
[Close]
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDH_ECO24 (Malate dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=mdh PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.030e-42
Identity = 96/185 (51.89%), Postives = 123/185 (66.49%), Query Frame = 2 
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEKGWLGKGKKRINRETISKGIRFCREMIN 559
            KK G YD  +L GVT LD++R+NTFVAE+ G  P EV+VPV+GGH+GVTILPLLSQV P  S T  E+  LT RIQN GTEVVEAK G GSATLSM  AAA+F  + +R L+G+ GV+ECAYV        FF+  + L + G+EE  S+G L+ +E+  L +G      +T+ K I    E +N
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNAL-EGM----LDTLKKDIALGEEFVN 311
[Close]
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDHM_PIG (Malate dehydrogenase, mitochondrial OS=Sus scrofa GN=MDH2 PE=1 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 1.030e-42
Identity = 86/184 (46.74%), Postives = 122/184 (66.30%), Query Frame = 2 
Query:    2 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEKGWLGKGKKRINRETISKGIRFCREM 553
            FKK G Y+P ++ GVT LD+VRAN FVAE+ GLDP  V VPV+GGHAG TI+PL+SQ  P       ++  LT RIQ  GTEVV+AK GAGSATLSMAYA A+F  + +  + G  GV+EC++V S  T+ P+F++ + L + GIE+   +G ++ +E+  + +    + + +I KG  F + M
Sbjct:  155 FKKHGVYNPNKIFGVTTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTIIPLISQCTPKVDFPQDQLSTLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDAMNGKEGVVECSFVKSQETDCPYFSTPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPEL-KASIKKGEEFVKNM 337
[Close]
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDH_PROMH (Malate dehydrogenase OS=Proteus mirabilis (strain HI4320) GN=mdh PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.346e-42
Identity = 91/158 (57.59%), Postives = 108/158 (68.35%), Query Frame = 2 
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEK 478
            KK G YD KRL GVT LD++RANTFVAE+ G DP+  +VPV+GGH+GVTILPLLSQV    S T  E+  LT RIQN GTEVVEAK G GSATLSM  AAA+F  + +R L G+  VIEC Y         FFA  VRL + G+EE   +G L+ +EK
Sbjct:  133 KKAGVYDKKRLFGVTTLDIIRANTFVAELKGKDPQTTNVPVIGGHSGVTILPLLSQVA-GVSFTDEEVAALTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLIRALNGEKDVIECTYTEGDGEHARFFAQPVRLGKNGVEEYLPIGQLSDFEK 289
[Close]
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDH_ENTS8 (Malate dehydrogenase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=mdh PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.915e-42
Identity = 95/185 (51.35%), Postives = 122/185 (65.95%), Query Frame = 2 
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEKGWLGKGKKRINRETISKGIRFCREMIN 559
            KK G YD  +L GVT LD++R+NTFVAE+ G  P E+DVPV+GGH+GVTILPLLSQ+ P  + T  E+  LT RIQN GTEVVEAK G GSATLSM  AAA+F  + +R L+G+ GV+ECAYV        FF+  + L + GIEE   +G L+ YE+  L +G      +T+ K I    E +N
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKKPAELDVPVIGGHSGVTILPLLSQI-PGVNFTDQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGEYARFFSQPLLLGKNGIEERKPIGTLSAYEQQAL-EGM----LDTLKKDIALGEEFVN 311
[Close]
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDHM_RAT (Malate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Mdh2 PE=1 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 3.915e-42
Identity = 87/184 (47.28%), Postives = 122/184 (66.30%), Query Frame = 2 
Query:    2 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEKGWLGKGKKRINRETISKGIRFCREM 553
            FKK G Y+P ++ GVT LD+VRANTFVAE+ GLDP  V+VPV+GGHAG TI+PL+SQ  P       ++  LT RIQ  GTEVV+AK GAGSATLSMAYA A+F  + +  + G  GVIEC++V S  TE  +F++ + L + G+E+   +G +  +E+  + +    + + +I KG  F + M
Sbjct:  155 FKKHGVYNPNKIFGVTTLDIVRANTFVAELKGLDPARVNVPVIGGHAGKTIIPLISQCTPKVDFPQDQLATLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDAMNGKEGVIECSFVQSKETECTYFSTPLLLGKKGLEKNLGIGKITPFEEKMIAEAIPEL-KASIKKGEDFVKNM 337
The following BLAST results are available for this feature:
BLAST of EY673880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
MDH_ECO5E1.030e-4251.89Malate dehydrogenase OS=Escherichia coli O157:H7 (... [more]
MDH_ECO571.030e-4251.89Malate dehydrogenase OS=Escherichia coli O157:H7 G... [more]
MDH_ECO551.030e-4251.89Malate dehydrogenase OS=Escherichia coli (strain 5... [more]
MDH_ECO451.030e-4251.89Malate dehydrogenase OS=Escherichia coli O45:K1 (s... [more]
MDH_ECO271.030e-4251.89Malate dehydrogenase OS=Escherichia coli O127:H6 (... [more]
MDH_ECO241.030e-4251.89Malate dehydrogenase OS=Escherichia coli O139:H28 ... [more]
MDHM_PIG1.030e-4246.74Malate dehydrogenase, mitochondrial OS=Sus scrofa ... [more]
MDH_PROMH1.346e-4257.59Malate dehydrogenase OS=Proteus mirabilis (strain ... [more]
MDH_ENTS83.915e-4251.35Malate dehydrogenase OS=Enterobacter sakazakii (st... [more]
MDHM_RAT3.915e-4247.28Malate dehydrogenase, mitochondrial OS=Rattus norv... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-004-C05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY673880 ID=EY673880; Name=EY673880; organism=Citrus sinensis; type=EST; length=795bp
TTTCAAGAAAGTTGGCACTTATGATCCAAAGCGACTTTTGGGAGTCACAA
TGCTTGATGTTGTTCGAGCCAATACTTTTGTGGCTGAGGTCTTGGGTCTT
GACCCCAGGGAAGTTGATGTTCCAGTTGTGGGAGGTCATGCAGGGGTTAC
TATTTTACCTCTTTTATCTCAGGTTAAACCATCATGCTCTCTCACCCCTA
CAGAAATTGACTACTTGACAGATCGTATCCAGAATGGTGGTACAGAAGTA
GTTGAGGCAAAAACTGGAGCTGGTTCGGCCACTCTATCGATGGCATATGC
TGCTGCCAAGTTTGCCGATGCTTGTCTCCGAGGCTTGAGGGGGGATGCCG
GTGTTATTGAGTGTGCATACGTGGCTTCTACGGTGACTGAACTCCCTTTC
TTTGCATCCAAAGTACGGCTTGACCGTGCTGGAATTGAGGAAATTTACTC
ACTTGGCCCCTTGAATGGATATGAAAAGGGCTGGTTGGGAAAAGGCAAAA
AAAGAATTAACCGGGAAACCATTTCAAAAGGAATTCGTTTTTGCCGGGAA
ATGATAAACAAACCCCCTGGGGGGAAAAAAGGGAAAATGGGTGGGGGTTT
TTGGTTTTTGCCCCCAATTTTCCACCAAAATATAGTTCCCCCAAAAAAAA
AAAGGGGGGGGTTTCTCTTTTTTCCCCCAGACCAAGATTAAATTATCTTT
TATTAACAAAAAAAAAAACCAAAAAGATTTCCCCTATTAGAGGGGGGGGG
GGGAGAGTGTGGAATATTTCTTAAGATTATCTTTGTGGTAAGGAA
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