EY673880

Overview
NameEY673880
Unique NameEY673880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length795
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDH_SALSV (Malate dehydrogenase OS=Salmonella schwarzengrund (strain CVM19633) GN=mdh PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.723e-42
Identity = 94/185 (50.81%), Postives = 121/185 (65.41%), Query Frame = 2 
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEKGWLGKGKKRINRETISKGIRFCREMIN 559
            KK G YD  +L GVT LD++R+NTFVAE+ G  P EV+VPV+GGH+GVTILPLLSQ+ P  S T  E   LT RIQN GTEVVEAK G GSATLSM  AAA+F  + +R L+G+ GV+ECAYV        FF+  + L + G+EE  S+G L+ +E+  L         +T+ K I+   + IN
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKLPTEVEVPVIGGHSGVTILPLLSQI-PGVSFTEQEAAELTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEKGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQHSLD-----AMLDTLKKDIQLGEDFIN 311
[Close]
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDH_SALPK (Malate dehydrogenase OS=Salmonella paratyphi A (strain AKU_12601) GN=mdh PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.723e-42
Identity = 94/185 (50.81%), Postives = 121/185 (65.41%), Query Frame = 2 
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEKGWLGKGKKRINRETISKGIRFCREMIN 559
            KK G YD  +L GVT LD++R+NTFVAE+ G  P EV+VPV+GGH+GVTILPLLSQ+ P  S T  E   LT RIQN GTEVVEAK G GSATLSM  AAA+F  + +R L+G+ GV+ECAYV        FF+  + L + G+EE  S+G L+ +E+  L         +T+ K I+   + IN
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKLPTEVEVPVIGGHSGVTILPLLSQI-PGVSFTEQEAAELTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEKGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQHSLD-----AMLDTLKKDIQLGEDFIN 311
[Close]
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDH_SALPC (Malate dehydrogenase OS=Salmonella paratyphi C (strain RKS4594) GN=mdh PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.723e-42
Identity = 94/185 (50.81%), Postives = 121/185 (65.41%), Query Frame = 2 
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEKGWLGKGKKRINRETISKGIRFCREMIN 559
            KK G YD  +L GVT LD++R+NTFVAE+ G  P EV+VPV+GGH+GVTILPLLSQ+ P  S T  E   LT RIQN GTEVVEAK G GSATLSM  AAA+F  + +R L+G+ GV+ECAYV        FF+  + L + G+EE  S+G L+ +E+  L         +T+ K I+   + IN
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKLPTEVEVPVIGGHSGVTILPLLSQI-PGVSFTEQEAAELTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEKGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQHSLD-----AMLDTLKKDIQLGEDFIN 311
[Close]
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDH_SALPB (Malate dehydrogenase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=mdh PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.723e-42
Identity = 94/185 (50.81%), Postives = 121/185 (65.41%), Query Frame = 2 
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEKGWLGKGKKRINRETISKGIRFCREMIN 559
            KK G YD  +L GVT LD++R+NTFVAE+ G  P EV+VPV+GGH+GVTILPLLSQ+ P  S T  E   LT RIQN GTEVVEAK G GSATLSM  AAA+F  + +R L+G+ GV+ECAYV        FF+  + L + G+EE  S+G L+ +E+  L         +T+ K I+   + IN
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKLPTEVEVPVIGGHSGVTILPLLSQI-PGVSFTEQEAAELTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEKGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQHSLD-----AMLDTLKKDIQLGEDFIN 311
[Close]
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDH_SALPA (Malate dehydrogenase OS=Salmonella paratyphi A GN=mdh PE=3 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 8.723e-42
Identity = 94/185 (50.81%), Postives = 121/185 (65.41%), Query Frame = 2 
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEKGWLGKGKKRINRETISKGIRFCREMIN 559
            KK G YD  +L GVT LD++R+NTFVAE+ G  P EV+VPV+GGH+GVTILPLLSQ+ P  S T  E   LT RIQN GTEVVEAK G GSATLSM  AAA+F  + +R L+G+ GV+ECAYV        FF+  + L + G+EE  S+G L+ +E+  L         +T+ K I+   + IN
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKLPTEVEVPVIGGHSGVTILPLLSQI-PGVSFTEQEAAELTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEKGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQHSLD-----AMLDTLKKDIQLGEDFIN 311
[Close]
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDH_SALHS (Malate dehydrogenase OS=Salmonella heidelberg (strain SL476) GN=mdh PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.723e-42
Identity = 94/185 (50.81%), Postives = 121/185 (65.41%), Query Frame = 2 
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEKGWLGKGKKRINRETISKGIRFCREMIN 559
            KK G YD  +L GVT LD++R+NTFVAE+ G  P EV+VPV+GGH+GVTILPLLSQ+ P  S T  E   LT RIQN GTEVVEAK G GSATLSM  AAA+F  + +R L+G+ GV+ECAYV        FF+  + L + G+EE  S+G L+ +E+  L         +T+ K I+   + IN
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKLPTEVEVPVIGGHSGVTILPLLSQI-PGVSFTEQEAAELTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEKGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQHSLD-----AMLDTLKKDIQLGEDFIN 311
[Close]
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDH_SALEP (Malate dehydrogenase OS=Salmonella enteritidis PT4 (strain P125109) GN=mdh PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.723e-42
Identity = 94/185 (50.81%), Postives = 121/185 (65.41%), Query Frame = 2 
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEKGWLGKGKKRINRETISKGIRFCREMIN 559
            KK G YD  +L GVT LD++R+NTFVAE+ G  P EV+VPV+GGH+GVTILPLLSQ+ P  S T  E   LT RIQN GTEVVEAK G GSATLSM  AAA+F  + +R L+G+ GV+ECAYV        FF+  + L + G+EE  S+G L+ +E+  L         +T+ K I+   + IN
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKLPTEVEVPVIGGHSGVTILPLLSQI-PGVSFTEQEAAELTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEKGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQHSLD-----AMLDTLKKDIQLGEDFIN 311
[Close]
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDH_SALDC (Malate dehydrogenase OS=Salmonella dublin (strain CT_02021853) GN=mdh PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.723e-42
Identity = 94/185 (50.81%), Postives = 121/185 (65.41%), Query Frame = 2 
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEKGWLGKGKKRINRETISKGIRFCREMIN 559
            KK G YD  +L GVT LD++R+NTFVAE+ G  P EV+VPV+GGH+GVTILPLLSQ+ P  S T  E   LT RIQN GTEVVEAK G GSATLSM  AAA+F  + +R L+G+ GV+ECAYV        FF+  + L + G+EE  S+G L+ +E+  L         +T+ K I+   + IN
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKLPTEVEVPVIGGHSGVTILPLLSQI-PGVSFTEQEAAELTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEKGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQHSLD-----AMLDTLKKDIQLGEDFIN 311
[Close]
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDH_SALA4 (Malate dehydrogenase OS=Salmonella agona (strain SL483) GN=mdh PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.723e-42
Identity = 94/185 (50.81%), Postives = 121/185 (65.41%), Query Frame = 2 
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEKGWLGKGKKRINRETISKGIRFCREMIN 559
            KK G YD  +L GVT LD++R+NTFVAE+ G  P EV+VPV+GGH+GVTILPLLSQ+ P  S T  E   LT RIQN GTEVVEAK G GSATLSM  AAA+F  + +R L+G+ GV+ECAYV        FF+  + L + G+EE  S+G L+ +E+  L         +T+ K I+   + IN
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKLPTEVEVPVIGGHSGVTILPLLSQI-PGVSFTEQEAAELTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEKGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQHSLD-----AMLDTLKKDIQLGEDFIN 311
[Close]
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDHM_BOVIN (Malate dehydrogenase, mitochondrial OS=Bos taurus GN=MDH2 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.723e-42
Identity = 85/184 (46.20%), Postives = 122/184 (66.30%), Query Frame = 2 
Query:    2 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEKGWLGKGKKRINRETISKGIRFCREM 553
            FKK G Y+P ++ GVT LD+VRAN FVAE+  LDP  V+VPV+GGHAG TI+PL+SQ  P       ++  LT RIQ  GTEVV+AK GAGSATLSMAYA A+F  + +  + G  GV+EC++V S  T+ P+F++ + L + GIE+   +G ++ +E+  + +    + + +I KG  F + M
Sbjct:  155 FKKHGVYNPNKIFGVTTLDIVRANAFVAELKDLDPARVNVPVIGGHAGKTIIPLISQCTPKVEFPQDQLTTLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDAMNGKEGVVECSFVKSQETDCPYFSTPLLLGKKGIEKNLGIGKVSPFEEKMIAEAIPEL-KASIKKGEEFVKNM 337
The following BLAST results are available for this feature:
BLAST of EY673880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
MDH_SALSV8.723e-4250.81Malate dehydrogenase OS=Salmonella schwarzengrund ... [more]
MDH_SALPK8.723e-4250.81Malate dehydrogenase OS=Salmonella paratyphi A (st... [more]
MDH_SALPC8.723e-4250.81Malate dehydrogenase OS=Salmonella paratyphi C (st... [more]
MDH_SALPB8.723e-4250.81Malate dehydrogenase OS=Salmonella paratyphi B (st... [more]
MDH_SALPA8.723e-4250.81Malate dehydrogenase OS=Salmonella paratyphi A GN=... [more]
MDH_SALHS8.723e-4250.81Malate dehydrogenase OS=Salmonella heidelberg (str... [more]
MDH_SALEP8.723e-4250.81Malate dehydrogenase OS=Salmonella enteritidis PT4... [more]
MDH_SALDC8.723e-4250.81Malate dehydrogenase OS=Salmonella dublin (strain ... [more]
MDH_SALA48.723e-4250.81Malate dehydrogenase OS=Salmonella agona (strain S... [more]
MDHM_BOVIN8.723e-4246.20Malate dehydrogenase, mitochondrial OS=Bos taurus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-004-C05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY673880 ID=EY673880; Name=EY673880; organism=Citrus sinensis; type=EST; length=795bp
TTTCAAGAAAGTTGGCACTTATGATCCAAAGCGACTTTTGGGAGTCACAA
TGCTTGATGTTGTTCGAGCCAATACTTTTGTGGCTGAGGTCTTGGGTCTT
GACCCCAGGGAAGTTGATGTTCCAGTTGTGGGAGGTCATGCAGGGGTTAC
TATTTTACCTCTTTTATCTCAGGTTAAACCATCATGCTCTCTCACCCCTA
CAGAAATTGACTACTTGACAGATCGTATCCAGAATGGTGGTACAGAAGTA
GTTGAGGCAAAAACTGGAGCTGGTTCGGCCACTCTATCGATGGCATATGC
TGCTGCCAAGTTTGCCGATGCTTGTCTCCGAGGCTTGAGGGGGGATGCCG
GTGTTATTGAGTGTGCATACGTGGCTTCTACGGTGACTGAACTCCCTTTC
TTTGCATCCAAAGTACGGCTTGACCGTGCTGGAATTGAGGAAATTTACTC
ACTTGGCCCCTTGAATGGATATGAAAAGGGCTGGTTGGGAAAAGGCAAAA
AAAGAATTAACCGGGAAACCATTTCAAAAGGAATTCGTTTTTGCCGGGAA
ATGATAAACAAACCCCCTGGGGGGAAAAAAGGGAAAATGGGTGGGGGTTT
TTGGTTTTTGCCCCCAATTTTCCACCAAAATATAGTTCCCCCAAAAAAAA
AAAGGGGGGGGTTTCTCTTTTTTCCCCCAGACCAAGATTAAATTATCTTT
TATTAACAAAAAAAAAAACCAAAAAGATTTCCCCTATTAGAGGGGGGGGG
GGGAGAGTGTGGAATATTTCTTAAGATTATCTTTGTGGTAAGGAA
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