EY680333

Overview
NameEY680333
Unique NameEY680333
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680333 vs. ExPASy Swiss-Prot
Match: PDIA3_RAT (Protein disulfide-isomerase A3 OS=Rattus norvegicus GN=Pdia3 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 6.805e-11
Identity = 37/108 (34.26%), Postives = 59/108 (54.63%), Query Frame = 2
Query:  335 AVNEVQVVTDSSWENLV--ISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLVSTLEK 652
            + ++V  +TD ++E+ V    S   +LVEF+APWCG C+ +AP  E  A    G V   K++   + N   KYG+   PT+  F++GE+  +  G      +VS L+K
Sbjct:   23 SASDVLELTDENFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKK 130          
BLAST of EY680333 vs. ExPASy Swiss-Prot
Match: ERP38_NEUCR (Protein disulfide-isomerase erp38 OS=Neurospora crassa GN=erp38 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 6.805e-11
Identity = 42/125 (33.60%), Postives = 66/125 (52.80%), Query Frame = 2
Query:  317 LCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAK--EYA-GKVACFKLNTDDSPNIATKYGIRSIPTVLFF----------KNGEKKESIIGAVPKSTLVSTLEK 652
            L  A  A + V  +  S+++++V+ S  P LVEF+APWCG C+ +AP  EELA   EYA  KV   K++ D    +  ++G++  PT+ FF          K G   +S+   + + T V   +K
Sbjct:   12 LAAAVAAKSAVLDLIPSNFDDVVLKSGKPTLVEFFAPWCGHCKNLAPVYEELATALEYAKDKVQIAKVDADAERALGKRFGVQGFPTLKFFDGKSEQPVDYKGGRDLDSLSNFIAEKTGVKARKK 136          
BLAST of EY680333 vs. ExPASy Swiss-Prot
Match: TXL1_SCHPO (Thioredoxin-like protein 1 OS=Schizosaccharomyces pombe GN=txl1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.887e-11
Identity = 29/74 (39.19%), Postives = 50/74 (67.57%), Query Frame = 2
Query:  410 VEFWAPWCGPCRMIAPAIEELAKEYAGKVACF-KLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKS 628
            V+ +A WCGPC+ I+P   +LA +YA     F K+N D+   IA+  G++++PT +FF+NG++ + + GA P++
Sbjct:   24 VDCYADWCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQRQIASGLGVKAMPTFVFFENGKQIDMLTGANPQA 97          
BLAST of EY680333 vs. ExPASy Swiss-Prot
Match: PDIA6_ARATH (Probable protein disulfide-isomerase A6 OS=Arabidopsis thaliana GN=At2g47470 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.887e-11
Identity = 33/85 (38.82%), Postives = 51/85 (60.00%), Query Frame = 2
Query:  341 NEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEY--AGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNG 589
            ++V V+TD S+E  V   +   LVEF+APWCG C+ +AP  E+L   +  A  V   K++ D+  ++ TKYG+   PT+ +F  G
Sbjct:   23 DDVVVLTDDSFEKEV-GKDKGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIAKVDCDEQKSVCTKYGVSGYPTIQWFPKG 106          
BLAST of EY680333 vs. ExPASy Swiss-Prot
Match: NGLY1_CAEEL (Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Caenorhabditis elegans GN=F56G4.5 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.887e-11
Identity = 28/71 (39.44%), Postives = 47/71 (66.20%), Query Frame = 2
Query:  404 VLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGA 616
            ++++F+A WCGPCRMI+P  E+ + EY G     K+N D + +I  +Y I ++PT +F KN ++ + + GA
Sbjct:   25 IIIDFFANWCGPCRMISPIFEQFSAEY-GNATFLKVNCDVARDIVQRYNISAMPTFIFLKNRQQVDMVRGA 94          
The following BLAST results are available for this feature:
BLAST of EY680333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
PDIA3_RAT6.805e-1134.26Protein disulfide-isomerase A3 OS=Rattus norvegicu... [more]
ERP38_NEUCR6.805e-1133.60Protein disulfide-isomerase erp38 OS=Neurospora cr... [more]
TXL1_SCHPO8.887e-1139.19Thioredoxin-like protein 1 OS=Schizosaccharomyces ... [more]
PDIA6_ARATH8.887e-1138.82Probable protein disulfide-isomerase A6 OS=Arabido... [more]
NGLY1_CAEEL8.887e-1139.44Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagin... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-009-H12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680333 ID=EY680333; Name=EY680333; organism=Citrus sinensis; type=EST; length=850bp
CAGTCATCGCCCAAAAGACCAAGGCCACATCTTCTTCTATACTCCTATCA
ATACTCTTTTAACTTGCTGTGAACAGACACATACCCAGCAAAAGAAAAAA
GAAAGACAGAGAAAAATGGCTATGAAGAATTGTTTTCAAGTTAGCTCAGT
GTATAGCACTAGAGCTGGTGTGGTACAATGTTACCAACCATTTTCATCTG
TAAAGAAGATTCATTTGCCGATTAGTAACGGGTTGAATAAATCCAATTTC
TCATTCACTTCATCATGCTCATCTCTTTCTCTTCCACTCGGAAGCAGAAG
CAGAAACTCCTTGATTCTCTGCAAAGCTCGGGAAGCTGTCAATGAAGTTC
AAGTGGTGACAGATTCAAGTTGGGAAAACCTTGTGATATCAAGTGAAAAC
CCTGTGCTTGTGGAGTTTTGGGCACCTTGGTGCGGACCATGCCGGATGAT
AGCGCCAGCTATTGAGGAATTAGCCAAAGAATACGCCGGAAAAGTTGCCT
GTTTCAAGCTCAACACCGATGATTCCCCCAACATTGCAACTAAGTATGGA
ATTAGAAGCATTCCAACTGTGCTCTTCTTCAAGAATGGAGAGAAGAAGGA
GAGCATCATTGGTGCTGTTCCCAAATCTACTTTGGTCTCTACTTTAGAAA
AATATGTAGAAGGAAGGGGCAAAAATCACTTTACTTGTTGTATGAAGGGC
ATATTAACCCAGTTTAAGTTTCTTTTCAATGGAGAAATCTCTTTCCCTTA
AGGGGGAAATTACCGGCGGGAAATTTAAATTTTTCTGGAAAAGGGACAAA
CTTCTTTTTCCTTTTTAATGAAATGGGTTCCGCTTTTTTTTTTTCCAAAA
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