EY703492

Overview
NameEY703492
Unique NameEY703492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length601
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY703492 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.461e-39
Identity = 80/115 (69.57%), Postives = 83/115 (72.17%), Query Frame = 1
Query:   13 VPA*SKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRS 357
            +PA SKILVNAWWLANNPA W K             SKVEANGNDF+Y+PFGVGRRSCP              RLVQNFELLPPPGQSKIDTAEKGGQFSL ILKHSTIV KPRS
Sbjct:  391 IPAESKILVNAWWLANNPAHWNKPDEFRPERFLEEESKVEANGNDFKYIPFGVGRRSCPGIILALPILGIVIGRLVQNFELLPPPGQSKIDTAEKGGQFSLQILKHSTIVCKPRS 505          
BLAST of EY703492 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.198e-39
Identity = 80/116 (68.97%), Postives = 85/116 (73.28%), Query Frame = 1
Query:   13 VPA*SKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 360
            +PA SKILVNAW+LANNP  WKK             SKVEANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPG+SKIDT+EKGGQFSLHILKHSTIV KPR+F
Sbjct:  390 IPAESKILVNAWFLANNPEHWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGKSKIDTSEKGGQFSLHILKHSTIVLKPRTF 505          
BLAST of EY703492 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.304e-37
Identity = 77/115 (66.96%), Postives = 81/115 (70.43%), Query Frame = 1
Query:   13 VPA*SKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRS 357
            +PA SKILVNAWWLANNPA WK              S VEANGNDFRY+PFGVGRRSCP              R+VQNFELLPPPGQSKIDT+EKGGQFSL IL HSTIV KPRS
Sbjct:  390 IPAESKILVNAWWLANNPAHWKDPQVFRPERFLEEESGVEANGNDFRYIPFGVGRRSCPGIILALPILGITIGRMVQNFELLPPPGQSKIDTSEKGGQFSLFILNHSTIVLKPRS 504          
BLAST of EY703492 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.008e-37
Identity = 75/115 (65.22%), Postives = 81/115 (70.43%), Query Frame = 1
Query:   13 VPA*SKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRS 357
            +PA SKILVNAWWLANNP  WKK             S VEANGNDFRY+PFGVGRRSCP              R+VQNFELLPPPGQSK+DT+EKGGQFSLHIL HS IV KPR+
Sbjct:  390 IPAESKILVNAWWLANNPNSWKKPEEFRPERFFEEESHVEANGNDFRYVPFGVGRRSCPGIILALPILGITIGRMVQNFELLPPPGQSKVDTSEKGGQFSLHILNHSIIVMKPRN 504          
The following BLAST results are available for this feature:
BLAST of EY703492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
TCMO_PETCR2.461e-3969.57Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]
TCMO_CATRO4.198e-3968.97Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]
TCMO_RUTGR2.304e-3766.96Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
TCMO_ARATH3.008e-3765.22Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-020-D03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703492 ID=EY703492; Name=EY703492; organism=Citrus sinensis; type=EST; length=601bp
CCACGCGTCCGCGTCCCTGCTTAGAGCAAAATCCTAGTGAACGCGTGGTG
GCTCGCCAACAATCCCGCCCAATGGAAGAAACCTGAAGAATTCAGGCCTG
AGAGGTTTTTGGAGGAGGAGTCCAAGGTTGAGGCTAATGGAAATGACTTC
CGTTACCTTCCTTTCGGTGTTGGAAGAAGAAGCTGCCCTGGAATTATCCT
TGCTTTGCCAATTCTTGGTATCACTATTGGGCGTTTGGTACAGAACTTTG
AGCTCTTGCCTCCTCCAGGTCAATCTAAGATTGACACTGCAGAGAAAGGT
GGGCAGTTCAGTTTGCACATTTTGAAGCACTCGACCATTGTTGCCAAGCC
TAGATCATTCTAGTTTCACAATTCCATTTGGTTGTAATGTTAAGACTGTT
TCAAAGTGGTTGAATGGTTTCTTCAATGTCGGATCAAATCAAGTGGCAGT
TGGCTAGTTATGTAATACTTGTGTAAATTTGTGAACTTAAATCTTCAAAT
CTTCATTTAAGATTTGCAATAAGTTTTATGTTTTGTTTCTTAGTGCAATT
ACTAGAAATAAATTAATTCCGTCCTCGTTAAAAAAAAGAAGAAAAAANAN
N
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