EY703481
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY703481 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 8.830e-21 Identity = 71/158 (44.94%), Postives = 85/158 (53.80%), Query Frame = 3 Query: 54 MATSTMALSSSFVGKAVNLAPSRNELSNG-GAFSLRKTGTCFFFLRYPVVPPGKI-------KFLGSILWRPPKLLDW*VPW*LPFGTLLGLSPDPETFARNRELKFFPAKWAMLGALGCVFPELLAQNGVKFGKGRWLKVGPKILTRGGL-ILGKPN 500 MATST AL+S+F G+ + NELS GA R P G I +LG PP L P + T GLS DPETFA+NREL+ ++WAMLGALGCV PELLA+NGVKFG+ W K G +I GGL LG P+ Sbjct: 1 MATSTAALTSTFSGQQLKPV---NELSRKVGAGEARVQ----MMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTA-GLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPS 150
BLAST of EY703481 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.355e-20 Identity = 68/161 (42.24%), Postives = 89/161 (55.28%), Query Frame = 3 Query: 54 MATSTMALSSSFVGKAVNLAPSRNELS-----NGGAFSLRKTGTCFFFLRYPVVPPG------KIKFLGSILWRPPKLLDW*VPW*LPFGTLLGLSPDPETFARNRELKFFPAKWAMLGALGCVFPELLAQNGVKFGKGRWLKVGPKILTRGGL-ILGKPN 500 MA S + SS+F G+ R+EL + G FS+R+T VP + KFLG + P L P + T GLS DPETFA+NREL+ ++WAMLGALGC+FPELL++NGV+FG+ W K G +I + GGL LG PN Sbjct: 1 MAASAIQ-SSAFAGQTA--LKQRDELVRKVGVSDGRFSMRRT--------VKAVPQSIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTA-GLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPN 149
BLAST of EY703481 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 3.355e-20 Identity = 68/160 (42.50%), Postives = 88/160 (55.00%), Query Frame = 3 Query: 54 MATSTMALSSSFVGKAVNLAPSRNELS------NGGAFSLRKT----GTCFFFLRYPVVPPGKIKFLGSILWRPPKLLDW*VPW*LPFGTLLGLSPDPETFARNRELKFFPAKWAMLGALGCVFPELLAQNGVKFGKGRWLKVGPKILTRGGL-ILGKPN 500 MATS + S+F G+ NEL GG S+R+T T ++ P + K+LG + P L P + T GLS DPETFA+NREL+ +WAMLGALGCVFPE+L++NGVKFG+ W K G +I + GGL LG PN Sbjct: 1 MATSAIQ-QSAFAGQTA--LKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWY------GPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTA-GLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPN 150
BLAST of EY703481 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.382e-20 Identity = 67/160 (41.88%), Postives = 87/160 (54.37%), Query Frame = 3 Query: 54 MATSTMALSSSFVGKAVNLAPSRNELSNGGAFSLRKTGTCF--FFLRYPV--------VPPGKIKFLGSILWRPPKLLDW*VPW*LPFGTLLGLSPDPETFARNRELKFFPAKWAMLGALGCVFPELLAQNGVKFGKGRWLKVGPKILTRGGL-ILGKPN 500 MAT++ SSS G+ + L P +NEL ++K GT +R V P + K+LG P L P + T +S DPETFA+NREL+ +WAMLGALGCVFPELLA+NG+KFG+ W K G +I + GGL G PN Sbjct: 1 MATASAIQSSSLAGQTL-LRPQQNEL-------VKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTA-AVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPN 151
BLAST of EY703481 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.382e-20 Identity = 52/100 (52.00%), Postives = 65/100 (65.00%), Query Frame = 3 Query: 204 PGKIKFLGSILWRPPKLLDW*VPW*LPFGTLLGLSPDPETFARNRELKFFPAKWAMLGALGCVFPELLAQNGVKFGKGRWLKVGPKILTRGGL-ILGKPN 500 P +K+LG P L P + T GLS DPETFA+NREL+ ++WAMLGALGCVFPELL++NGVKFG+ W K G +I + GGL LG P+ Sbjct: 15 PDGVKYLGPFSGESPSYLTGEFPGDYGWDTA-GLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 113
BLAST of EY703481 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.723e-20 Identity = 64/152 (42.11%), Postives = 85/152 (55.92%), Query Frame = 3 Query: 54 MATSTMALSSSFVGKAVNLAPSR--NELSNGGAFSLRKTGTCFFFLRYPVVPPGKIKFLGSILWRPPKLLDW*VPW*LPFGTLLGLSPDPETFARNRELKFFPAKWAMLGALGCVFPELLAQNGVKFGKGRWLKVGPKILTRGGL-ILGKPN 500 MAT + S+FVG+AV + + ++ N G + T + + K+LG + P L P + T GLS DPETFARNREL+ +WAMLGALGCVFPE+L++NGVKFG+ W K G +I + GGL LG PN Sbjct: 1 MATCAIQ-QSAFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTA-GLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPN 150
BLAST of EY703481 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.762e-20 Identity = 62/146 (42.47%), Postives = 83/146 (56.85%), Query Frame = 3 Query: 54 MATSTMALSS-SFVGKAVNLAPSRNELSNGGAFSLRKTGTCFFFLRY--PVVPPGKIKFLGSILWRPPKLLDW*VPW*LPFGTLLGLSPDPETFARNRELKFFPAKWAMLGALGCVFPELLAQNGVKFGKGRWLKVGPKILTRGGL 482 MA +TMA++S + VGK A ++ G ++RKT R P ++ +LG + PP L P + T GLS DPETFA+NREL+ +WA+ LGCVFPELLA+NGVKFG+G W K G +I + GGL Sbjct: 1 MAAATMAITSRALVGKP---AAGTRDVFGEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTE-GLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFGEGVWFKAGSQIFSEGGL 142
BLAST of EY703481 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.762e-20 Identity = 53/100 (53.00%), Postives = 63/100 (63.00%), Query Frame = 3 Query: 204 PGKIKFLGSILWRPPKLLDW*VPW*LPFGTLLGLSPDPETFARNRELKFFPAKWAMLGALGCVFPELLAQNGVKFGKGRWLKVGPKILTRGGL-ILGKPN 500 P + K+LG + P L P + T GLS DPETFARNREL+ ++WAMLGALGC FPELL +NGVKFG+ W K G +I GGL LG PN Sbjct: 52 PDRPKYLGPFSEQIPSYLTGEFPGDYGWDTA-GLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPN 150
BLAST of EY703481 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.175e-19 Identity = 68/157 (43.31%), Postives = 88/157 (56.05%), Query Frame = 3 Query: 54 MATSTMALSSSFVGKAVNLAPSRNELSN------GGAFSLRKT-GTCFFFLRYPVVPPGKIKFLGSILWRPPKLLDW*VPW*LPFGTLLGLSPDPETFARNRELKFFPAKWAMLGALGCVFPELLAQNGVKFGKGRWLKVGPKILTRGGL-ILGKPN 500 MATS + S+F G+ S+NEL GG ++R+T + + Y P K+LG + P L P + T GLS DPETFARNREL+ +WAMLGALGCVFPE+L++NGV FG+ W K G +I + GGL LG PN Sbjct: 1 MATSAIQ-QSAFAGQTA--LKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRP---KYLGPFSEQTPSYLTGEFPGDYGWDTA-GLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPN 150
BLAST of EY703481 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.710e-19 Identity = 51/96 (53.12%), Postives = 62/96 (64.58%), Query Frame = 3 Query: 216 KFLGSILWRPPKLLDW*VPW*LPFGTLLGLSPDPETFARNRELKFFPAKWAMLGALGCVFPELLAQNGVKFGKGRWLKVGPKILTRGGL-ILGKPN 500 K+LG + P L P + T GLS DPETFARNREL+ +WAMLGALGCVFPE+L++NGV FG+ W K G +I + GGL LG PN Sbjct: 28 KYLGPFSEQTPSYLTGEFPGDYGWDTA-GLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPN 122 The following BLAST results are available for this feature:
BLAST of EY703481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >EY703481 ID=EY703481; Name=EY703481; organism=Citrus sinensis; type=EST; length=813bpback to top |