EY703463
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY703463 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.317e-13 Identity = 42/100 (42.00%), Postives = 59/100 (59.00%), Query Frame = 2 Query: 161 TKASFLGGKKLTLRKNGATAGTRSVSVSAAAADPNRPLW---FPGSTPTEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAARIFIPEL 451 + + G K+T+RK + A + VS S+ PNR + F G +P+ +L G PGD+G+D GL +DPET N + E++HCRWAMLGA PEL Sbjct: 23 SSSEITGNGKVTMRKTASKA--KPVSSSSPWYGPNRVKYLGPFSGESPS-YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 119
BLAST of EY703463 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.935e-13 Identity = 43/103 (41.75%), Postives = 62/103 (60.19%), Query Frame = 2 Query: 155 GATKASFLGGKKLTLRKNGATAGT-RSVSVSAAAADPNRPLW---FPGSTPTEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAARIFIPEL 451 G T + +G ++T+RK TAG ++V S+ P+R + F G +P+ +L G PGD+G+D GL +DPET N + E++HCRWAMLGA PEL Sbjct: 21 GPTASEIIGEGRITMRK---TAGKPKTVQSSSPWYGPDRVKYLGPFSGESPS-YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 119
BLAST of EY703463 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.540e-13 Identity = 41/100 (41.00%), Postives = 58/100 (58.00%), Query Frame = 2 Query: 161 TKASFLGGKKLTLRKNGATAGTRSVSVSAAAADPNRPLW---FPGSTPTEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAARIFIPEL 451 + + G K+T+RK + A T VS + P+R + F G +P+ +L G PGD+G+D GL +DPET N + E++HCRWAMLGA PEL Sbjct: 23 SSSEITGNGKVTMRKTASKAKT--VSSGSPWYGPDRVKYLGPFSGESPS-YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 119
BLAST of EY703463 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.540e-13 Identity = 44/109 (40.37%), Postives = 59/109 (54.13%), Query Frame = 2 Query: 140 STSVAGAT---KASFLGGKKLTLRKNGATAGTRSVSVSAAAADPNRPLWFP--GSTPTEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAARIFIPEL 451 ST+ AG +S G ++T+RK A A + S S P+R L+ P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA PEL Sbjct: 10 STAFAGKAVNVPSSSFGEARVTMRKTAAKAKPAAASGSPWYG-PDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 117
BLAST of EY703463 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.540e-13 Identity = 42/101 (41.58%), Postives = 52/101 (51.49%), Query Frame = 2 Query: 146 SVAGATKASFLGGKKLTLRKNGATAGTRSVSVSAAAADPNRPLWFPGSTPTEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAARIFIPE 448 S +TK+ F + + GAT S+SA W PG +LDGS PGDFGFD LGLG P L +SE++HCRWAML I +PE Sbjct: 17 SFLSSTKSKFAAAMPVYV---GATNFMSRFSMSAD--------WMPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPE 106
BLAST of EY703463 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.902e-12 Identity = 39/104 (37.50%), Postives = 57/104 (54.81%), Query Frame = 2 Query: 146 SVAGATKASFLGGKKLTLRKNGATAGTRSVSVSAAAADPNRPLWFP--GSTPTEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAARIFIPEL 451 +V ++ +G ++ +RK A A + VS S+ +R L+ P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA PEL Sbjct: 17 AVKNLPSSALIGDARVNMRKTAAKA--KQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 118
BLAST of EY703463 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.902e-12 Identity = 40/94 (42.55%), Postives = 56/94 (59.57%), Query Frame = 2 Query: 179 GGKKLTLRKNGATAGTRSVSVSAAAADPNRPLW---FPGSTPTEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAARIFIPEL 451 G K+T+RK + A + VS + P+R + F G +P+ +L G PGD+G+D GL +DPET N + E++HCRWAMLGA PEL Sbjct: 28 GNGKVTMRKTASKA--KPVSSGSPWYGPDRVKYLGPFSGESPS-YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 118
BLAST of EY703463 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.902e-12 Identity = 33/58 (56.90%), Postives = 37/58 (63.79%), Query Frame = 2 Query: 275 WFPGSTPTEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAARIFIPE 448 WFPG LDGS PGDFGFDPLGL + PE +SEI HCRWAML + +PE Sbjct: 48 WFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPE 105
BLAST of EY703463 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.238e-12 Identity = 40/94 (42.55%), Postives = 55/94 (58.51%), Query Frame = 2 Query: 179 GGKKLTLRKNGATAGTRSVSVSAAAADPNRPLW---FPGSTPTEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAARIFIPEL 451 G K+T+RK A + VS + P+R + F G +P+ +L G PGD+G+D GL +DPET N + E++HCRWAMLGA PEL Sbjct: 28 GNGKVTMRKTANKA--KPVSSGSPWYGPDRVKYLGPFSGESPS-YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 118
BLAST of EY703463 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.238e-12 Identity = 40/100 (40.00%), Postives = 55/100 (55.00%), Query Frame = 2 Query: 161 TKASFLGGKKLTLRKNGATAGTRSVSVSAAAADPNRPLW---FPGSTPTEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAARIFIPEL 451 + + G K T+RK A + VS + P+R + F G P+ +L G PGD+G+D GL +DPET N + E++HCRWAMLGA PEL Sbjct: 23 SSSEITGNGKATMRKTATKA--KPVSSGSPWYGPDRVKYLGPFSGEAPS-YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 119 The following BLAST results are available for this feature:
BLAST of EY703463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >EY703463 ID=EY703463; Name=EY703463; organism=Citrus sinensis; type=EST; length=944bpback to top |