EY703442

Overview
NameEY703442
Unique NameEY703442
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length933
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY703442 vs. ExPASy Swiss-Prot
Match: PME_BRACM (Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.170e-19
Identity = 49/136 (36.03%), Postives = 75/136 (55.15%), Query Frame = 1
Query:  133 TVGPSYHHAKALPVGADLSAFYTGHM*SYQDTLYVHSNRHFFVNCLIAGTVDTIFGYAATVLHNCDIHARKPNSGHKNMVTAPGRTDPNQ-NTGIVIQKCKIGATSDLKPVQGSFPTYLWRP*NEYSTTVIMHSSL 537
            T GP  + A A  V  D +  +      YQDTLYV++ R F+ N +++GTVD I G +ATV+ N  I  RK + G  N VTA G+        GIV+  C+I A  +L+  + +  +YL RP   ++TT ++ + +
Sbjct:  359 TAGPLGNQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFINGKSATVIQNSLILCRKGSPGQTNHVTADGKQKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEI 494          

HSP 2 Score: 31.187 bits (69), Expect = 2.170e-19
Identity = 16/40 (40.00%), Postives = 19/40 (47.50%), Query Frame = 3
Query:  540 DLIHPAGWHEWDG-NFALTHCFTESITQRSLCRN*GRVKW 656
            DLI P GW+EW G  F LT  + E   +        RV W
Sbjct:  496 DLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANPAARVPW 535          
BLAST of EY703442 vs. ExPASy Swiss-Prot
Match: PME64_ARATH (Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana GN=PME64 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.818e-19
Identity = 54/144 (37.50%), Postives = 71/144 (49.31%), Query Frame = 1
Query:  133 TVGPSYHHAKALPVGADLSAFYTGHM*SYQDTLYVHSNRHFFVNCLIAGTVDTIFGYAATVLHNCDI-----HARKPNSGHKNMVTAPGRTDPNQNTGIVIQKCKIGATSD-LKPVQGS---FPTYLWRP*NEYSTTVIMHSSL 537
            T G   H A A    +D S          QDTLY HS R F+  C I G VD IFG +A V  +CDI     H++    G  N +TA GR D +Q+TG V   C I  T + +K  Q +      +L RP  E+S TV ++ +L
Sbjct:  390 TAGADAHQAVAFRSDSDFSVLENCEFLGNQDTLYAHSLRQFYKQCRIQGNVDFIFGNSAAVFQDCDILIASKHSKLEQGGANNAITAHGRIDASQSTGFVFLNCSINGTEEYMKEFQANPEGHKNFLGRPWKEFSRTVFVNCNL 533          

HSP 2 Score: 27.335 bits (59), Expect = 2.818e-19
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 3
Query:  543 LIHPAGWHEWDGNFAL 590
            LI P GW  W+G+FAL
Sbjct:  536 LISPDGWMPWNGDFAL 551          
BLAST of EY703442 vs. ExPASy Swiss-Prot
Match: PME_MEDSA (Pectinesterase/pectinesterase inhibitor OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.285e-18
Identity = 54/135 (40.00%), Postives = 70/135 (51.85%), Query Frame = 1
Query:  133 TVGPSYHHAKALPVGADLSAFYTGHM*SYQDTLYVHSNRHFFVNCLIAGTVDTIFGYAATVLHNCDIHARKPNSGHKNMVTAPGRTDPNQNTGIVIQKCKIGATSDLKPVQGSFPTYLWRP*NEYSTTVIMHSSL 537
            T G   H A AL V AD + FY   M  +QDTLYV S R F+ +C I+GT+D +FG    V  NC +  R P  G + +VTA GR   N  + +V Q         L  V     +YL RP  +YS  VIM S++
Sbjct:  229 TAGTGKHQAVALRVTADQAIFYNCQMDGFQDTLYVQSQRQFYRDCSISGTIDFVFGERFGVFQNCKLVCRLPAKGQQCLVTAGGREKQNSASALVFQSSHFTGEPALTSVTPKV-SYLGRPWKQYSKVVIMDSTI 362          
BLAST of EY703442 vs. ExPASy Swiss-Prot
Match: PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.085e-13
Identity = 47/125 (37.60%), Postives = 63/125 (50.40%), Query Frame = 1
Query:  157 AKALPVGADLSAFYTGHM*SYQDTLYVHSNRHFFVNCLIAGTVDTIFGYAATVLHNCDIHARKPNSGHKNMVTAPGRTDPNQNTGIVIQKCKIGATSDLKPVQGSFPTYLWRP*NEYSTTVIMHS 531
            A AL V AD +AFY   + SYQDTL   +  H+F NC I G  D I G A+++   C +H+  PN+G    +TA  RT   + +G     CK+          GS  T+L RP   YS  V  +S
Sbjct:  153 AVALRVAADKAAFYGCVITSYQDTLLDDNGNHYFKNCYIEGATDFICGSASSLYERCHLHSLSPNNG---SITAQMRTSATEKSGFTFLGCKL---------TGSGSTFLGRPWGAYSRVVFAYS 265          

HSP 2 Score: 20.4014 bits (41), Expect = 1.085e-13
Identity = 4/12 (33.33%), Postives = 10/12 (83.33%), Query Frame = 3
Query:  537 TDLIHPAGWHEW 572
            ++++ P GW++W
Sbjct:  268 SNVVAPQGWNQW 279          
BLAST of EY703442 vs. ExPASy Swiss-Prot
Match: PME53_ARATH (Probable pectinesterase 53 OS=Arabidopsis thaliana GN=PME53 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.098e-12
Identity = 42/99 (42.42%), Postives = 55/99 (55.56%), Query Frame = 1
Query:  157 AKALPVGADLSAFYTGHM*SYQDTLYVHSNRHFFVNCLIAGTVDTIFGYAATVLHNCDIHARKPNSGHKNMVTAPGRTDPNQNTGIVIQKCKIGATSDL 453
            A AL V AD +AF+   M   QDTLY H  RH++ +C I G+VD IFG A ++   C +HA     G    VTA GR+   ++TG    KCK+  T  L
Sbjct:  202 AVALRVSADNAAFFGCRMLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHAIADKLG---AVTAQGRSSVLEDTGFSFVKCKVTGTGVL 297          
BLAST of EY703442 vs. ExPASy Swiss-Prot
Match: PME31_ARATH (Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.027e-11
Identity = 40/125 (32.00%), Postives = 60/125 (48.00%), Query Frame = 1
Query:  157 AKALPVGADLSAFYTGHM*SYQDTLYVHSNRHFFVNCLIAGTVDTIFGYAATVLHNCDIHARKPNSGHKNMVTAPGRTDPNQNTGIVIQKCKIGATSDLKPVQGSFPTYLWRP*NEYSTTVIMHS 531
            A A+ V AD  AFY      +QDTLY+H  + +  +C I G+VD IFG +  +L +C IH +      +  +TA  R    ++TG V  +C I           S   YL RP   +   V+ ++
Sbjct:  122 AVAIRVTADRCAFYNCRFLGWQDTLYLHHGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKS-----QGFITAQSRKSSQESTGYVFLRCVITGNGQ------SGYMYLGRPWGPFGRVVLAYT 235          
The following BLAST results are available for this feature:
BLAST of EY703442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
PME_BRACM2.170e-1936.03Pectinesterase/pectinesterase inhibitor (Fragment)... [more]
PME64_ARATH2.818e-1937.50Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME_MEDSA2.285e-1840.00Pectinesterase/pectinesterase inhibitor OS=Medicag... [more]
PME11_ARATH1.085e-1337.60Putative pectinesterase 11 OS=Arabidopsis thaliana... [more]
PME53_ARATH1.098e-1242.42Probable pectinesterase 53 OS=Arabidopsis thaliana... [more]
PME31_ARATH6.027e-1132.00Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-019-F04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703442 ID=EY703442; Name=EY703442; organism=Citrus sinensis; type=EST; length=933bp
CCACGCGTCCGATAGACTACTAACTATTATCACACGAAGTTGAAATGTGG
TTGATGGAAGCACAACTTTTAAGTCTGTTACAATTGCTGTTGTTGGTGAA
TGATTATTGGCCCGATACATTGCATTACATAAACAGTGGGCCCCTCATAT
CACCACGCAAAGGCACTGCCAGTGGGAGCTGACCTTTCAGCATTTTACAC
TGGCCATATGTAATCTTACCAAGACACACTTTACGTGCACTCCAACCGCC
ATTTTTTTGTGAACTGCTTAATTGCTGGCACGGTTGATACCATTTTTGGT
TATGCTGCAACCGTGTTACATAATTGTGACATCCATGCACGAAAGCCCAA
TTCCGGCCATAAAAATATGGTCACAGCTCCAGGCAGGACTGACCCTAACC
AAAACACCGGCATTGTCATTCAAAAATGTAAGATTGGTGCCACCTCCGAT
TTAAAACCGGTTCAGGGTAGTTTCCCGACGTACCTCTGGAGGCCCTGAAA
CGAGTACTCGACGACGGTGATCATGCACTCGTCGCTACTGACTTGATCCA
CCCTGCCGGGTGGCACGAGTGGGATGGTAACTTCGCGTTGACACATTGTT
TTACGGAGAGCATCACACAGCGGAGCCTGTGCCGGAACTGAGGGAGAGTG
AAATGGAAGGATTTAGGGTATTACAGGTGCTACCGAGGCTAAGCTTTTCT
GCCTGGAACTTCATTGCTGGTANTNNCTGCTGGGCTCACTGGGTTCCGTA
CTCCCTGGGTCGTATATTCCTAGGAGTTTACTTATATGTTCTGGTTAGGG
CATCATCCCACCTCGGTCTTCCATATGAATTTTGATGGACCGGTTTTATT
GTGGCTTCATCTCCAAATCCTTTGGGTGTTTTCAGAAATAAATCCTGAAA
GGATATTAAAAAAAAAAAAGGGCGCCGTTTAAA
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