EY703441
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY703441 vs. ExPASy Swiss-Prot
Match: RS19_NITMS (30S ribosomal protein S19P OS=Nitrosopumilus maritimus (strain SCM1) GN=rps19p PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.796e-26 Identity = 56/133 (42.11%), Postives = 90/133 (67.67%), Query Frame = 3 Query: 123 KKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 521 K+F++RG+ + L +MS ++L +LF+AR RR RG+ LI++++ AK G+ P++TH+R++II+P M+ + V++GK F V I+ EMIGHYL E+ I+ + V HG PG+GA+ SS ++PLK Sbjct: 3 KEFAYRGIPKEELDNMSLEKLFQLFNARQRRSLTRGITDGKRKLIEEIKAAKA----GKLKNPIKTHVRDLIILPYMVDVTVNVFSGKEFRPVTIRTEMIGHYLGEYVITNRKVSHGAPGVGASRSSLYVPLK 131
BLAST of EY703441 vs. ExPASy Swiss-Prot
Match: RS19_METBU (30S ribosomal protein S19P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps19p PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.862e-25 Identity = 61/139 (43.88%), Postives = 85/139 (61.15%), Query Frame = 3 Query: 105 PKKRTFKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 521 PK++ +++FRG + L +MS ++ A+L A+ RR +RG ++++ R K E VRTH RNMII PEMIG + VYNGK F ++EI PEMIGH E+S + V HG G+GAT SS+F+PLK Sbjct: 10 PKRKG--EYTFRGKTVAQLQEMSFEDFAELLPAKERRSIRRGFSDSQKGVLQQFRDGK---------ESVRTHFRNMIIFPEMIGKNLEVYNGKEFVKIEIMPEMIGHRFGEYSPTRNRVSHGSAGVGATRSSKFVPLK 137
BLAST of EY703441 vs. ExPASy Swiss-Prot
Match: RS19_METM7 (30S ribosomal protein S19P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps19p PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.413e-24 Identity = 51/139 (36.69%), Postives = 85/139 (61.15%), Query Frame = 3 Query: 105 PKKRTFKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 521 P++R +F ++G L+ L +M + ++ +R RR RG+ L+ K++KA+R G++P +RTH R+ +I PEMIG G+YNGK F ++++ E +G +L E + + V+HG PG+GAT S F+P+K Sbjct: 25 PRRRV--EFKYKGFTLEELQEMPIKKFMEIVPSRQRRTMLRGITPNQRKLVMKIKKARRLTNRGKEPRVIRTHCRDFVITPEMIGLTFGIYNGKEFKEIKLVEETVGRFLGEMAPTRSVVQHGSPGMGATRGSMFVPIK 161
BLAST of EY703441 vs. ExPASy Swiss-Prot
Match: RS19_METM5 (30S ribosomal protein S19P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps19p PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.375e-24 Identity = 51/139 (36.69%), Postives = 85/139 (61.15%), Query Frame = 3 Query: 105 PKKRTFKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 521 P++R +F ++G L+ L +M + ++ +R RR RG+ K L+ K++KA+R G++ +RTH R+ +I PEMIG G+YNGK F ++++ E +G +L E + + V+HG PG+GAT S F+P+K Sbjct: 25 PRRRV--EFKYKGFTLEELQEMPIKKFMEIVPSRQRRTMARGITPKQRKLVMKIKKARRLTNRGKEARVIRTHCRDFVITPEMIGLTFGIYNGKEFKEIKLVEETVGRFLGEMAPTRAVVQHGSPGMGATRGSMFVPIK 161
BLAST of EY703441 vs. ExPASy Swiss-Prot
Match: RS19_METMP (30S ribosomal protein S19P OS=Methanococcus maripaludis GN=rps19p PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.169e-24 Identity = 51/139 (36.69%), Postives = 84/139 (60.43%), Query Frame = 3 Query: 105 PKKRTFKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 521 P++R +F ++G L+ L +M + ++ +R RR RG+ K L+ K++KA+R G+ +RTH R+ +I PEMIG G+YNGK F ++++ E +G +L E + + V+HG PG+GAT S F+P+K Sbjct: 25 PRRRV--EFKYKGFSLEELQEMPIKKFMEIVPSRQRRTMARGITPKQRKLVMKIKKARRLTNRGKDARVIRTHCRDFVITPEMIGLTFGIYNGKEFKEIKLVEETVGRFLGEMAPTRGVVQHGSPGMGATRGSMFVPIK 161
BLAST of EY703441 vs. ExPASy Swiss-Prot
Match: RS19_METM6 (30S ribosomal protein S19P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rps19p PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.169e-24 Identity = 52/139 (37.41%), Postives = 83/139 (59.71%), Query Frame = 3 Query: 105 PKKRTFKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 521 P++R +F ++G L+ L +M + ++ +R RR RG+ L+ K++KA+R G++P +RTH R+ +I PEMIG G+YNGK F V + E +G +L E + + V+HG PG+GAT S F+P+K Sbjct: 25 PRRRV--EFRYKGFTLEELQEMPIKKFMEIVPSRQRRTMLRGITPNQRKLVMKIKKARRLTNRGKEPRVIRTHCRDFVITPEMIGLTFGIYNGKEFKDVTLVEETVGRFLGEMAPTRAVVQHGSPGMGATRGSMFVPIK 161
BLAST of EY703441 vs. ExPASy Swiss-Prot
Match: RS19_METVS (30S ribosomal protein S19P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps19p PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.484e-23 Identity = 51/139 (36.69%), Postives = 83/139 (59.71%), Query Frame = 3 Query: 105 PKKRTFKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 521 P++R +F ++G L L +M + ++ AR RR RG+ L+ K++KA+R G++P +RTH R+ +I PEMIG I +Y GK F ++++ E +G +L E + + V+HG PG+GAT S F+P+K Sbjct: 24 PRRRV--EFKYKGFTLPELQEMPIKKFIEIVPARQRRTMSRGITPNQRKLVMKIKKARRLVNRGKEPRVIRTHCRDFVITPEMIGLTISIYTGKQFKEIKLVEETLGRFLGEMAPTRGIVQHGSPGMGATRGSMFVPIK 160
BLAST of EY703441 vs. ExPASy Swiss-Prot
Match: RS19_METHJ (30S ribosomal protein S19P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps19p PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.943e-23 Identity = 57/136 (41.91%), Postives = 83/136 (61.03%), Query Frame = 3 Query: 114 RTFKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 521 R ++F++ G +D L MS ++L + +RARR+ RG L+ +R +RTH R+MII+PEMIG I +YNGK F +VE++PE + HYL EF+++ + V HG GIGAT SS+F+PLK Sbjct: 11 RRKEEFTYHGYKIDELRAMSLEDLLPVMPSRARRKVLRGWTIGEEKLLSDIRS---------NGSRIRTHQRDMIILPEMIGREIEIYNGKEFIRVELQPESVFHYLGEFALTRRRVTHGSAGIGATRSSKFVPLK 137
BLAST of EY703441 vs. ExPASy Swiss-Prot
Match: RS19_METMA (30S ribosomal protein S19P OS=Methanosarcina mazei GN=rps19p PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.014e-22 Identity = 56/139 (40.29%), Postives = 86/139 (61.87%), Query Frame = 3 Query: 105 PKKRTFKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 521 PK++ ++++RG + L ++S +E A+L +R RR +RG ++ + ++ K+ +RTH R+MII+PEMIG I V+NGK F VE++PEMIGH EF+ + V HG G+GAT SS+F+PLK Sbjct: 10 PKRKG--EYTYRGKTVSELQELSLEEFAELLPSRERRSIKRGFTDGQKKVLHEFKEGKK----------IRTHHRDMIILPEMIGIAIEVHNGKEFVNVELQPEMIGHRFGEFAPTRSRVNHGSAGVGATRSSKFVPLK 136
BLAST of EY703441 vs. ExPASy Swiss-Prot
Match: RS19_METAC (30S ribosomal protein S19P OS=Methanosarcina acetivorans GN=rps19p PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.950e-22 Identity = 53/139 (38.13%), Postives = 86/139 (61.87%), Query Frame = 3 Query: 105 PKKRTFKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 521 PK++ ++++RG + L ++S +E A+L +R RR +RG ++ + ++ K+ +RTH R+MII+PEMIG I ++NGK F V+++PEM+GH EF+ + V HG G+GAT SS+F+PLK Sbjct: 10 PKRKG--EYTYRGKTVSELQELSLEEFAELLPSRERRSLKRGFTDGQKKVLHEFKEGKK----------IRTHHRDMIILPEMIGKTIEIHNGKGFVSVDLQPEMVGHRFGEFAPTRSRVSHGSAGVGATRSSKFVPLK 136 The following BLAST results are available for this feature:
BLAST of EY703441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >EY703441 ID=EY703441; Name=EY703441; organism=Citrus sinensis; type=EST; length=725bpback to top |