EY703296

Overview
NameEY703296
Unique NameEY703296
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length937
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY703296 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 9.756e-94
Identity = 177/257 (68.87%), Postives = 194/257 (75.49%), Query Frame = 2
Query:  125 NLAPSGNELSNGG------RISMRK-TGSKSVSSG--SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFSEGGLDYLGNPSLIHAQSILAIXACXVVLMGAVEGYRIAGGPLXEVTDPLYPGGSFDPIGFG**PRSFC*AQG*GIKNGRXGYVFMFWFLXSGHCHPAGDR*RTXPDHLADPVNNNALGLXTHFCPRK 868
            ++ P  N+L   G      R++MRK TG KSV++   SPWYGPDRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKA AQIFSEGGLDYLG+P LIHAQSILAI AC V+LMGA+EGYR+AGGPL EVTDP+YPGG+FDP+G    P +F   +   IKNGR     MF F         G       DHLADPVNNNA    T+F P K
Sbjct:   23 SVKPQNNQLLGVGGAHGEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI-ENLADHLADPVNNNAWAYATNFVPGK 278          
BLAST of EY703296 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 1.274e-93
Identity = 177/257 (68.87%), Postives = 194/257 (75.49%), Query Frame = 2
Query:  125 NLAPSGNELSNGG------RISMRK-TGSKSVSSG--SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFSEGGLDYLGNPSLIHAQSILAIXACXVVLMGAVEGYRIAGGPLXEVTDPLYPGGSFDPIGFG**PRSFC*AQG*GIKNGRXGYVFMFWFLXSGHCHPAGDR*RTXPDHLADPVNNNALGLXTHFCPRK 868
            ++ P  N+L   G      R++MRK TG KSV++   SPWYGPDRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKA AQIFSEGGLDYLG+P LIHAQSILAI AC V+LMGA+EGYR+AGGPL EVTDP+YPGG+FDP+G    P +F   +   IKNGR     MF F         G       DHLADPVNNNA    T+F P K
Sbjct:   23 SVKPQNNQLLGVGGAHGEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI-ENLADHLADPVNNNAWAYATNFVPGK 278          
BLAST of EY703296 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2)

HSP 1 Score: 342.043 bits (876), Expect = 2.839e-93
Identity = 179/250 (71.60%), Postives = 189/250 (75.60%), Query Frame = 2
Query:  131 APS-GNELSNGGRISMRKTGSK---SVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFSEGGLDYLGNPSLIHAQSILAIXACXVVLMGAVEGYRIAGGPLXEVTDPLYPGGSFDPIGFG**PRSFC*AQG*GIKNGRXGYVFMFWFLXSGHCHPAGDR*RTXPDHLADPVNNNALGLXTHFCPRK 868
            APS  + L    RI+MRKT +K   + SSGSPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKA +QIFSEGGLDYLGNPSLIHAQSILAI A  VVLMGAVEGYRIAGGPL EV DPLYPGG+FDP+G    P +F   +   IKNGR     MF F         G       DHLADPVNNNA    T+F P K
Sbjct:   17 APSTSSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL-ENLADHLADPVNNNAWAYATNFVPGK 265          
BLAST of EY703296 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2)

HSP 1 Score: 341.273 bits (874), Expect = 4.842e-93
Identity = 175/238 (73.53%), Postives = 184/238 (77.31%), Query Frame = 2
Query:  161 GRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFSEGGLDYLGNPSLIHAQSILAIXACXVVLMGAVEGYRIAGGPLXEVTDPLYPGGSFDPIGFG**PRSFC*AQG*GIKNGRXGYVFMFWFLXSGHCHPAGDR*RTXPDHLADPVNNNALGLXTHFCPRK 868
            GRI+MRK+ +K    +SGSPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKA +QIFSEGGLDYLGNPSLIHAQSILAI A  VVLMGAVEGYRIAGGPL EV DPLYPGGSFDP+G    P +F   +   IKNGR     MF F         G       DHLADPVNNNA    T+F P K
Sbjct:   25 GRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL-ENLADHLADPVNNNAWAYATNFVPGK 261          
BLAST of EY703296 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1)

HSP 1 Score: 332.413 bits (851), Expect = 2.249e-90
Identity = 176/252 (69.84%), Postives = 187/252 (74.21%), Query Frame = 2
Query:  113 GKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFSEGGLDYLGNPSLIHAQSILAIXACXVVLMGAVEGYRIAGGPLXEVTDPLYPGGSFDPIGFG**PRSFC*AQG*GIKNGRXGYVFMFWFLXSGHCHPAGDR*RTXPDHLADPVNNNALGLXTHFCPRK 868
            G+A+ LAPS  EL  G R+SMRKT  K+VSSGSPWYGPDRVKYLGPFSGE PSYLTGEF G        LSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKA +QIFSEGGLDYLGNPSLIHAQSILAI A  V+LMGAVEGYRIAGGPL EVTDP+YPGGSFDP+G    P +    +   +KNGR     MF F         G       DHLADPVNNNA    T  CP K
Sbjct:   15 GQAMKLAPSTPELGVG-RVSMRKTAPKTVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFHG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEALAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL-ENLADHLADPVNNNAWAYATKLCPGK 256          
BLAST of EY703296 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1)

HSP 1 Score: 330.487 bits (846), Expect = 8.547e-90
Identity = 166/229 (72.49%), Postives = 176/229 (76.86%), Query Frame = 2
Query:  182 TGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFSEGGLDYLGNPSLIHAQSILAIXACXVVLMGAVEGYRIAGGPLXEVTDPLYPGGSFDPIGFG**PRSFC*AQG*GIKNGRXGYVFMFWFLXSGHCHPAGDR*RTXPDHLADPVNNNALGLXTHFCPRK 868
            T  K  SS SPW+GPD VKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKA +QIFSEGGLDYLGNPSL+HAQSILAI A  V+LMGAVEGYRIAGGPL EV DPLYPGGSFDP+G    P +F   +   +KNGR     MF F         G       DHLADPVNNNA    T+F P K
Sbjct:    1 TTKKVASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEVPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPL-ENLADHLADPVNNNAWSYATNFVPGK 228          
BLAST of EY703296 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2)

HSP 1 Score: 320.472 bits (820), Expect = 8.845e-87
Identity = 162/237 (68.35%), Postives = 179/237 (75.53%), Query Frame = 2
Query:  158 GGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFSEGGLDYLGNPSLIHAQSILAIXACXVVLMGAVEGYRIAGGPLXEVTDPLYPGGSFDPIGFG**PRSFC*AQG*GIKNGRXGYVFMFWFLXSGHCHPAGDR*RTXPDHLADPVNNNALGLXTHFCPRK 868
            GGR+SMR+T   + +S   WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKA +QIFSEGGLDYLGNP+LIHAQSILAI AC VVLMG VEGYR+ GGPL E  DP+YPGG+FDP+G    P +F   +   IKNGR     MF F         G       DHLADPV NNA    T+F P K
Sbjct:   32 GGRVSMRRTVKSAPTS--IWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI-ENLFDHLADPVANNAWAYATNFVPGK 265          
BLAST of EY703296 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 3.361e-86
Identity = 163/238 (68.49%), Postives = 173/238 (72.69%), Query Frame = 2
Query:  161 GRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFSEGGLDYLGNPSLIHAQSILAIXACXVVLMGAVEGYRIAGGPLXEVTDPLYPGGSFDPIGFG**PRSFC*AQG*GIKNGRXGYVFMFWFLXSGHCHPAGDR*RTXPDHLADPVNNNALGLXTHFCPRK 868
            GRI+MRKT +K     SGSPWYG DRV YLGP SG PPSYLTGEFPGDYGWDT GLSADPETFAKNRELEVIHCRWA+   LGCVFPELLARNGVKFGE VWFKA +QIFSEGGL + GNPSL+HAQSILAI AC VVLMGAVEGY +AGG L EV DPLY GGSFDP+G G  P  F   +   IKNGR     MF F         G       DHL DPVNNNA    T+F P K
Sbjct:   28 GRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFGEGVWFKAGSQIFSEGGLSHPGNPSLVHAQSILAIWACQVVLMGAVEGYHVAGGRLGEVVDPLYLGGSFDPLGLGDDPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI-ENLADHLTDPVNNNAWAYATNFVPGK 264          
BLAST of EY703296 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 1.277e-85
Identity = 164/247 (66.40%), Postives = 179/247 (72.47%), Query Frame = 2
Query:  143 NELSNG-----GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFSEGGLDYLGNPSLIHAQSILAIXACXVVLMGAVEGYRIAGGPLXEVTDPLYPGGSFDPIGFG**PRSFC*AQG*GIKNGRXGYVFMFWFLXSGHCHPAGDR*RTXPDHLADPVNNNALGLXTHFCPRK 868
            NELS        R+ M    SK+  SGS WYG DR  YLGPFSG PPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKA +QIF+EGGLDYLGNPSL+HAQSILAI AC V+LMGAVEGYR+AGGPL EV DP+YPGGSFDP+G    P +F   +   +KNGR     MF F         G       DHLADP  NNA    T+F P K
Sbjct:   21 NELSRKVGAGEARVQMMAPKSKA-PSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI-ENLSDHLADPAVNNAWAYATNFTPGK 265          
BLAST of EY703296 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 1.668e-85
Identity = 158/224 (70.54%), Postives = 174/224 (77.68%), Query Frame = 2
Query:  164 RISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAQIFSEGGLDYLGNPSLIHAQSILAIXACXVVLMGAVEGYRIAGGPLXEVTDPLYPGGSFDPIGFG**PRSFC*AQG*GIKNGRXGYVFMFWFLXSGHCHPAGDR*RTXPDHLADPVNNNA 835
            R++MR+T SKS  S + WYG DR K+LGPFSGE PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ PELLA++GVKFGEAVWFKA AQIFSEGGLDYLGNPSL+HAQSILAI AC VVLMGAVEGYR+AGGPL EVTDP+YPGGSFDP+G    P +F   +   IKNGR     MF F         G       DHLADPV NNA
Sbjct:   35 RVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL-ENLNDHLADPVANNA 257          
The following BLAST results are available for this feature:
BLAST of EY703296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
CB2A_PYRPY9.756e-9468.87Chlorophyll a-b binding protein 1A, chloroplastic ... [more]
CB2A_PINSY1.274e-9368.87Chlorophyll a-b binding protein type 2 member 1A, ... [more]
CB21_ORYSJ2.839e-9371.60Chlorophyll a-b binding protein 1, chloroplastic O... [more]
CB22_ORYSJ4.842e-9373.53Chlorophyll a-b binding protein 2, chloroplastic O... [more]
CB22_SOYBN2.249e-9069.84Chlorophyll a-b binding protein 2, chloroplastic O... [more]
CB21_PEA8.547e-9072.49Chlorophyll a-b binding protein AB96 (Fragment) OS... [more]
CB21_GOSHI8.845e-8768.35Chlorophyll a-b binding protein 151, chloroplastic... [more]
CB48_MAIZE3.361e-8668.49Chlorophyll a-b binding protein 48, chloroplastic ... [more]
CB23_POLMU1.277e-8566.40Chlorophyll a-b binding protein type 1 member F3, ... [more]
CB2_PHYPA1.668e-8570.54Chlorophyll a-b binding protein, chloroplastic OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-018-A04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703296 ID=EY703296; Name=EY703296; organism=Citrus sinensis; type=EST; length=937bp
CCACGCGTCCGCTTCTCTTGCTTACACAGCTTCTGTTGCTTACACAGCTT
CTGCTTCTCAATTAAATTCCTCAATGGCAACCTCGACCATGGCTCTCTCC
TCATCATTCGTCGGCAAGGCTGTGAACCTTGCCCCTTCAGGCAATGAGCT
GAGCAATGGTGGCCGCATCTCCATGCGTAAAACCGGGAGCAAGTCTGTTT
CTTCAGGTAGCCCGTGGTACGGCCCGGACAGAGTCAAGTACTTGGGTCCA
TTCTCTGGCGAGCCCCCAAGCTACTTGACTGGTGAGTTCCCTGGTGACTA
CGGTTGGGACACTGCTGGGCTTTCAGCTGACCCAGAAACCTTTGCCAAGA
ACCGTGAACTCGAAGTCATCCACTGCAGATGGGCCATGTTGGGAGCTCTT
GGATGCGTCTTCCCGGAGCTCTTGGCCCGCAACGGAGTCAAGTTCGGTGA
GGCCGTGTGGTTCAAGGCGGNGGCCCAGATCTTCAGCGAGGGCGGGCTTG
ACTACTTGGGGAACCCAAGCCTGATCCACGCTCAGAGCATCTTGGCCATC
TNGGCTTGCCANGTGGTCTTGATGGGAGCCGTTGAGGGTTACAGAATTGC
TGGAGGGCCGCTCGNTGAAGTGACTGACCCATTGTACCCAGGTGGCAGCT
TTGATCCCATTGGGTTTGGCTGATGACCCCGGAGCTTTTGCTGAGCTCAA
GGNTAAGGAATCAAGAATGGAAGGTNGGGCTATGTCTTCATGTTTTGGTT
TCTTNCGTCAGGCCATTGTCACCCGGCAGGGGACCGTTAAAGAACTTGNC
CCGACCACTTGGCTGACCCTGTCAATAACAATGCCCTGGGCCTANCCACC
CACTTTTGTCCCCGGAAAGTGACCTTCGGTTGAATAAAAGTTTTCCTTTT
TCCGTTTTTGGGATATAAGAAAATCTTTGGGACCTCA
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