EY703294 | Citrus Genome Database

Overview


Name	EY703294
Unique Name	EY703294
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	911

Libraries


Library Name	Type
Sweet orange fruit, development stadium (2 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY703294 vs. ExPASy Swiss-Prot
Match: GL14_ARATH (Germin-like protein subfamily 1 member 4 OS=Arabidopsis thaliana GN=At3g04180 PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.226e-43
Identity = 83/145 (57.24%), Postives = 102/145 (70.34%), Query Frame = 3

Query:  111 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLERTLYVGFVTSDQLNNTLIAXVLNKGDVFVFPQGLIHFQFNIGKT 545
            DP  LQD CVA N+  +GV+VNG+FCKDPK     DF+ SGL  PGNT    G   T  +VE++PGLNTLG+   R D+AP G  PPH HPR S+IFLV++  L+VGFV+S++ N TL   VL  GDVFVFP+GLIHF  NIG+T
Sbjct:   26 DPSPLQDYCVATNET-NGVYVNGEFCKDPKRVTTNDFYTSGLNVPGNTIIGPGARNTVVDVERLPGLNTLGVDIARYDFAPGGLDPPHTHPRGSQIFLVMKGKLFVGFVSSNEYNYTLFTKVLYPGDVFVFPKGLIHFHANIGET 169

HSP 2 Score: 28.4906 bits (62), Expect = 3.226e-43
Identity = 11/25 (44.00%), Postives = 16/25 (64.00%), Query Frame = 2

Query:  581 PGEVTIADTVFGAHPSINPRFSCQA 655
            PG + I D VFG+ P I+P+   +A
Sbjct:  182 PGRIIIGDAVFGSKPLIDPKVLAKA 206

[Close]

BLAST of EY703294 vs. ExPASy Swiss-Prot
Match: GL16_ARATH (Germin-like protein subfamily 1 member 6 OS=Arabidopsis thaliana GN=At3g04200 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.212e-42
Identity = 85/145 (58.62%), Postives = 103/145 (71.03%), Query Frame = 3

Query:  111 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLERTLYVGFVTSDQLNNTLIAXVLNKGDVFVFPQGLIHFQFNIGKT 545
            DP  LQD CVA ++  + VFVNGKFCKDPK   A DF +SGL    NT N LG + T  +V +IPGLNTLG+S  R+D+A  GQ PPHIHPRA+EI +V +  L VGFV+S+Q NN L   VL +GDVFVFP GLIHFQ N+ +T
Sbjct:   27 DPNPLQDFCVAASET-NRVFVNGKFCKDPKSVTANDFSYSGLNIARNTTNFLGSNVTTVDVNKIPGLNTLGVSLARLDFAQGGQNPPHIHPRATEILVVTKGKLLVGFVSSNQDNNRLFYKVLKRGDVFVFPIGLIHFQMNVRRT 170

HSP 2 Score: 28.1054 bits (61), Expect = 1.212e-42
Identity = 11/17 (64.71%), Postives = 14/17 (82.35%), Query Frame = 2

Query:  581 PGEVTIADTVFGAHPSI 631
            PG + IAD VFG++PSI
Sbjct:  183 PGTIRIADAVFGSNPSI 199

[Close]

BLAST of EY703294 vs. ExPASy Swiss-Prot
Match: GL22_ORYSJ (Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700 PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 5.934e-42
Identity = 90/144 (62.50%), Postives = 99/144 (68.75%), Query Frame = 3

Query:  108 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLERTLYVGFVTSDQLNNTLIAXVLNKGDVFVFPQGLIHFQFNIG 539
            +DPG LQD CV   D    V VNG  CKD K   A DFFFSGL   GNT N+ G + T  NV QIPGLNT+G+S  RIDYAP G  PPH HPRA+EI  VLE +LYVGFV S+   N L   VLNKGDVFVFPQGL+HFQFN G
Sbjct:   29 SDPGLLQDFCVV--DKMSQVRVNGFPCKDAKDVVAGDFFFSGLHMAGNTTNKQGSNVTTVNVAQIPGLNTMGVSLVRIDYAPNGLNPPHTHPRATEIPTVLEGSLYVGFVISNP-ENKLFTKVLNKGDVFVFPQGLVHFQFNNG 169

HSP 2 Score: 25.7942 bits (55), Expect = 5.934e-42
Identity = 9/18 (50.00%), Postives = 14/18 (77.78%), Query Frame = 2

Query:  581 PGEVTIADTVFGAHPSIN 634
            PG +T+ + VFG+ PSI+
Sbjct:  184 PGVITVGNAVFGSKPSIS 201

[Close]

BLAST of EY703294 vs. ExPASy Swiss-Prot
Match: GL88_ORYSJ (Germin-like protein 8-8 OS=Oryza sativa subsp. japonica GN=Os08g0189700 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.710e-41
Identity = 87/142 (61.27%), Postives = 99/142 (69.72%), Query Frame = 3

Query:  108 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLERTLYVGFVTSDQLNNTLIAXVLNKGDVFVFPQGLIHFQFN 533
            +DP  LQD CVA  D    V VNG  C DPK   A+ FF + +       N++G + T  NV QIPGLNTLGIS  RIDYAP G+ PPH HPRA+EI  VLE TLYVGFVTS+  NNTL + VLNKGDVFVFP+GLIHFQFN
Sbjct:   23 SDPSPLQDFCVA--DKHSPVLVNGFACLDPKYVTADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKVLNKGDVFVFPEGLIHFQFN 161

HSP 2 Score: 27.335 bits (59), Expect = 1.710e-41
Identity = 11/25 (44.00%), Postives = 17/25 (68.00%), Query Frame = 2

Query:  581 PGEVTIADTVFGAHPSINPRFSCQA 655
            PG +TIA+ VFG+ P I+ +   +A
Sbjct:  179 PGAITIANAVFGSKPPISDKVLAKA 203

[Close]

BLAST of EY703294 vs. ExPASy Swiss-Prot
Match: GL87_ORYSJ (Germin-like protein 8-7 OS=Oryza sativa subsp. japonica GN=GER6 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 2.904e-41
Identity = 87/142 (61.27%), Postives = 99/142 (69.72%), Query Frame = 3

Query:  108 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLERTLYVGFVTSDQLNNTLIAXVLNKGDVFVFPQGLIHFQFN 533
            +DP  LQD CVA  D    V VNG  C DPK   A+ FF + +       N++G + T  NV QIPGLNTLGIS  RIDYAP G+ PPH HPRA+EI  VLE TLYVGFVTS+  NNTL + VLNKGDVFVFP+GLIHFQFN
Sbjct:   24 SDPSPLQDFCVA--DKHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKVLNKGDVFVFPEGLIHFQFN 162

HSP 2 Score: 26.1794 bits (56), Expect = 2.904e-41
Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 2

Query:  581 PGEVTIADTVFGAHPSIN 634
            PG +TIA+ VFG+ P I+
Sbjct:  180 PGAITIANAVFGSKPPIS 197

[Close]

BLAST of EY703294 vs. ExPASy Swiss-Prot
Match: GL82_ORYSJ (Germin-like protein 8-2 OS=Oryza sativa subsp. japonica GN=GER3 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 2.904e-41
Identity = 89/144 (61.81%), Postives = 107/144 (74.31%), Query Frame = 3

Query:  108 TDPGHLQDVCVA-INDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLERTLYVGFVTSDQLNNTLIAXVLNKGDVFVFPQGLIHFQFN 533
            +DP  LQD CVA +N P   V VNG  CK+P  A A+DFF +  L KP +T N++G + T  NV Q+PGLNTLGIS  R+D+AP G  PPH HPRA+EIF VLE TLYVGFVTS+  +N L++ VLNKGDVFVFP+GLIHFQFN
Sbjct:   25 SDPSPLQDFCVADLNSP---VRVNGFVCKNPMNASADDFFKAAMLDKPRDTNNKVGSNVTLVNVLQLPGLNTLGISIARLDFAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSNP-DNRLLSKVLNKGDVFVFPEGLIHFQFN 164

HSP 2 Score: 26.5646 bits (57), Expect = 2.904e-41
Identity = 10/18 (55.56%), Postives = 15/18 (83.33%), Query Frame = 2

Query:  581 PGEVTIADTVFGAHPSIN 634
            PG +TIA+ VFG++P I+
Sbjct:  182 PGVITIANAVFGSNPPIS 199

[Close]

BLAST of EY703294 vs. ExPASy Swiss-Prot
Match: GL810_ORYSJ (Germin-like protein 8-10 OS=Oryza sativa subsp. japonica GN=GLP2 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 3.784e-41
Identity = 87/142 (61.27%), Postives = 99/142 (69.72%), Query Frame = 3

Query:  108 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLERTLYVGFVTSDQLNNTLIAXVLNKGDVFVFPQGLIHFQFN 533
            +DP  LQD CVA  D    V VNG  C DPK   A+ FF + +       N++G + T  NV QIPGLNTLGIS  RIDYAP G+ PPH HPRA+EI  VLE TLYVGFVTS+  NNTL + VLNKGDVFVFP+GLIHFQFN
Sbjct:   23 SDPSPLQDFCVA--DMHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKVLNKGDVFVFPEGLIHFQFN 161

HSP 2 Score: 26.1794 bits (56), Expect = 3.784e-41
Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 2

Query:  581 PGEVTIADTVFGAHPSIN 634
            PG +TIA+ VFG+ P I+
Sbjct:  179 PGAITIANAVFGSKPPIS 196

[Close]

BLAST of EY703294 vs. ExPASy Swiss-Prot
Match: GL89_ORYSJ (Germin-like protein 8-9 OS=Oryza sativa subsp. japonica GN=Os08g0189850 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.852e-40
Identity = 87/142 (61.27%), Postives = 98/142 (69.01%), Query Frame = 3

Query:  108 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLERTLYVGFVTSDQLNNTLIAXVLNKGDVFVFPQGLIHFQFN 533
            +DP  LQD CVA  D    V VNG  C DPK   A+ FF + +       N++G + T  NV QIPGLNTLGIS  RIDYAP GQ PPH HPRA+EI  VLE TL+VGFVTS+  NNTL + VLNKGDVFVFP GLIHFQFN
Sbjct:   23 SDPSPLQDFCVA--DKHSPVLVNGFACLDPKYVTADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLHVGFVTSNP-NNTLFSKVLNKGDVFVFPVGLIHFQFN 161

HSP 2 Score: 26.1794 bits (56), Expect = 1.852e-40
Identity = 11/25 (44.00%), Postives = 16/25 (64.00%), Query Frame = 2

Query:  581 PGEVTIADTVFGAHPSINPRFSCQA 655
            PG +TIA+ VFG+ P I+     +A
Sbjct:  179 PGVITIANAVFGSKPPISDEVLAKA 203

[Close]

BLAST of EY703294 vs. ExPASy Swiss-Prot
Match: GL86_ORYSJ (Germin-like protein 8-6 OS=Oryza sativa subsp. japonica GN=Os08g0189500 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 2.412e-40
Identity = 87/142 (61.27%), Postives = 97/142 (68.31%), Query Frame = 3

Query:  108 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLERTLYVGFVTSDQLNNTLIAXVLNKGDVFVFPQGLIHFQFN 533
            +DP  LQD CVA  D    V VNG  C DPK   A+ FF + +       N++G + T  NV QIPGLNTLGIS  RIDYAP GQ PPH HPRA+EI  VLE TLYVGFVTS+  NNTL + VL KGDVFVFP GLIHFQFN
Sbjct:   24 SDPSPLQDFCVA--DEHSPVLVNGFACLDPKHVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKVLKKGDVFVFPVGLIHFQFN 162

HSP 2 Score: 26.5646 bits (57), Expect = 2.412e-40
Identity = 11/25 (44.00%), Postives = 16/25 (64.00%), Query Frame = 2

Query:  581 PGEVTIADTVFGAHPSINPRFSCQA 655
            PG +TIA+ VFG+ P I+     +A
Sbjct:  180 PGAITIANAVFGSKPPISDEVLAKA 204

[Close]

BLAST of EY703294 vs. ExPASy Swiss-Prot
Match: GL85_ORYSJ (Germin-like protein 8-5 OS=Oryza sativa subsp. japonica GN=Os08g0189400 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.180e-39
Identity = 87/142 (61.27%), Postives = 97/142 (68.31%), Query Frame = 3

Query:  108 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLERTLYVGFVTSDQLNNTLIAXVLNKGDVFVFPQGLIHFQFN 533
            +DP  LQD CVA  D    V VNG  C +P    A+ FF +         N++G + T  NV QIPGLNTLGIS  RIDYAP GQ PPH HPRA+EI  VLE TLYVGFVTS+  NNTL + VLNKGDVFVFPQGLIHFQFN
Sbjct:   23 SDPSPLQDFCVA--DMHSPVRVNGFACLNPMEVNADHFFKAAKLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKVLNKGDVFVFPQGLIHFQFN 161

HSP 2 Score: 26.5646 bits (57), Expect = 1.180e-39
Identity = 11/25 (44.00%), Postives = 16/25 (64.00%), Query Frame = 2

Query:  581 PGEVTIADTVFGAHPSINPRFSCQA 655
            PG +TIA+ VFG+ P I+     +A
Sbjct:  179 PGAITIANAVFGSKPPISDEVLAKA 203

The following BLAST results are available for this feature:

BLAST of EY703294 vs. ExPASy Swiss-Prot

BLAST of EY703294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87


Match Name	E-value	Identity	Description
GL14_ARATH	3.226e-43	57.24	Germin-like protein subfamily 1 member 4 OS=Arabid...	[more]
GL16_ARATH	1.212e-42	58.62	Germin-like protein subfamily 1 member 6 OS=Arabid...	[more]
GL22_ORYSJ	5.934e-42	62.50	Putative germin-like protein 2-2 OS=Oryza sativa s...	[more]
GL88_ORYSJ	1.710e-41	61.27	Germin-like protein 8-8 OS=Oryza sativa subsp. jap...	[more]
GL87_ORYSJ	2.904e-41	61.27	Germin-like protein 8-7 OS=Oryza sativa subsp. jap...	[more]
GL82_ORYSJ	2.904e-41	61.81	Germin-like protein 8-2 OS=Oryza sativa subsp. jap...	[more]
GL810_ORYSJ	3.784e-41	61.27	Germin-like protein 8-10 OS=Oryza sativa subsp. ja...	[more]
GL89_ORYSJ	1.852e-40	61.27	Germin-like protein 8-9 OS=Oryza sativa subsp. jap...	[more]
GL86_ORYSJ	2.412e-40	61.27	Germin-like protein 8-6 OS=Oryza sativa subsp. jap...	[more]
GL85_ORYSJ	1.180e-39	61.27	Germin-like protein 8-5 OS=Oryza sativa subsp. jap...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-701-018-A02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY703294 ID=EY703294; Name=EY703294; organism=Citrus sinensis; type=EST; length=911bp
CCACGCCGTCCGGAAAAGGCACATCCTGTGACTTAATCACCATGAAGGTA
ATTCAATTTCTTATAGGTTTTGCCCTCTTGGCTTTGGCTTCTTCTTTGGC
CTCTGCCACTGACCCTGGCCATCTTCAAGATGTCTGTGTAGCCATCAATG
ACCCCAAGGATGGTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAG
CTTGCGAGAGCAGAAGATTTCTTCTTCTCAGGGCTAGGCAAGCCTGGAAA
CACAGCAAATCGACTTGGTGTTGATGAAACAGATGCAAATGTTGAGCAAA
TTCCAGGACTCAACACCCTTGGCATATCAGCATTCCGTATTGACTATGCA
CCATATGGCCAAAGGCCACCTCACATTCACCCCCGTGCCAGCGAAATCTT
CTTAGTCCTGGAAAGAACTCTNTATGTCGGTTTTGTGACATCAGACCAAC
TGAATAACACACTCATCGCANAAGTTCTAAATAAGGGAGATGTTTTTGTG
TTTCCACAAGGTTTGATTCACTTCCAATTCAACATTGGAAAAACAAATGC
AGCTGCCTATTCTGCTTCTAACAGCCATTCCCGGGTGAAGTTACCATAGC
CGACACAGTCTTTGGAGCCCATCCTTCAATCAATCCCCGATTTTCTTGCC
AAGCCATTCCCAGTTNACCCAAAGAATAGTGAAAGATCTTCAAAATTAGT
TCATTAATGGCAATTTAGGAGAAGGAATTATGACGCTTTATATAAATGGC
CTCTTCCCTAGTGGGTGTATTACTTTATTCCCAAATTTTATATCTAATTA
AATGGATAAAAGAGGTTTTCAATGAACCTTTTTCAGGCTGACTGGGGCCA
TGAAAAAAACATAATGTAATGGGTTTTATTTAAAAAAAAAAAAAAAATAA
AGGGCCGCCGT