EY703294

Overview
NameEY703294
Unique NameEY703294
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY703294 vs. ExPASy Swiss-Prot
Match: GL38_ORYSJ (Germin-like protein 3-8 OS=Oryza sativa subsp. japonica GN=Os03g0804700 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.123e-24
Identity = 63/150 (42.00%), Postives = 86/150 (57.33%), Query Frame = 3
Query:  111 DPGHLQDVCVAINDPKDGVFVN-------GKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLERTLYVGFVTSDQLNNTLIAXVLNKGDVFVFPQGLIHFQFNIG 539
            DP  +QD CVA+  P+ G           G  CK      ++DFFF+GL    +T NR G + T AN E  PGLNTLG+S  R+D AP G  P H HPRA+E+  V+   +  GFV++        + VL +G+ FV P+G+IHFQ+N+G
Sbjct:   26 DPEPVQDFCVAVV-PRAGDAAAAACPAYPGFPCKPASTVVSDDFFFAGLAVASDTDNRFGFNVTAANAETFPGLNTLGVSIGRVDLAPGGVNPLHSHPRATELIHVVAGRVLAGFVST---AGEFYSKVLGEGETFVVPRGMIHFQYNVG 171          

HSP 2 Score: 21.557 bits (44), Expect = 2.123e-24
Identity = 9/22 (40.91%), Postives = 11/22 (50.00%), Query Frame = 2
Query:  566 F*QPFPGEVTIADTVFGAHPSI 631
            F    PG V    T+FG+ P I
Sbjct:  181 FNSQMPGVVAAGSTLFGSDPEI 202          
BLAST of EY703294 vs. ExPASy Swiss-Prot
Match: GL33_ARATH (Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana GN=GER3 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.523e-24
Identity = 62/140 (44.29%), Postives = 81/140 (57.86%), Query Frame = 3
Query:  123 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLERTLYVGFVTSDQLNNTLIAXVLNKGDVFVFPQGLIHFQFNIGK 542
            +QD CVA  DPK     +G  CK+P      DF F+GLG  GNT+N +    T A      G+N LG+S  R+D A  G  P H HP ASE+ +V++ T+  GF++S    N +    LN+GD  VFPQGL+HFQ N GK
Sbjct:   22 VQDFCVA--DPKGPQSPSGYSCKNPDQVTENDFAFTGLGTAGNTSNIIKAAVTPAFAPAYAGINGLGVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFISS---ANKVYLKTLNRGDSMVFPQGLLHFQLNSGK 156          
BLAST of EY703294 vs. ExPASy Swiss-Prot
Match: GLT3_ARATH (Germin-like protein subfamily T member 3 OS=Arabidopsis thaliana GN=At1g74820 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.601e-24
Identity = 63/140 (45.00%), Postives = 85/140 (60.71%), Query Frame = 3
Query:  126 QDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLERTLYVGFVTSDQLNNTLIAXVLNKGDVFVFPQGLIHFQFNIGKT 545
            QD CVA  D +     +G  CK      +EDFF+SGL  P NT+N  G+    AN+   PGLNTLGIS + +  AP G   PH HP  +E  +V+E ++ VGF+T+   N TL + V+  GD+FV P GLIH++ N+GKT
Sbjct:   41 QDFCVA--DLQATPTNSGYPCKSQ--VTSEDFFYSGLNTPLNTSNPKGIAANPANLLTFPGLNTLGISMYNVAIAPGGYNQPHSHPGVTEAGVVIEGSVLVGFLTT---NYTLYSKVIGPGDMFVIPPGLIHYEGNVGKT 173          
BLAST of EY703294 vs. ExPASy Swiss-Prot
Match: GLP1_SINAL (Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.601e-24
Identity = 63/140 (45.00%), Postives = 81/140 (57.86%), Query Frame = 3
Query:  123 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLERTLYVGFVTSDQLNNTLIAXVLNKGDVFVFPQGLIHFQFNIGK 542
            +QD CVA  DPK     +G  CK+P      DF FSGLGK GNT+N +    T A      GLN L +S  R+D A  G  P H HP ASE+ +V++ T+  GF++S    N +    L++GD  VFPQGL+HFQ N GK
Sbjct:   22 VQDFCVA--DPKGPQNPSGYSCKNPDQVTENDFAFSGLGKAGNTSNVIKAAVTPAFAPAFAGLNGLDVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFISS---ANKVYLKTLSRGDSMVFPQGLLHFQLNSGK 156          
BLAST of EY703294 vs. ExPASy Swiss-Prot
Match: GLP1_BRANA (Germin-like protein 1 OS=Brassica napus GN=GER1 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.895e-23
Identity = 65/141 (46.10%), Postives = 79/141 (56.03%), Query Frame = 3
Query:  123 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLERTLYVGFVTSDQLNNTLIAXVLNKGDVFVFPQGLIHFQFNIGKT 545
            +QD CVA  + K      G  C  P   +A DF FS LG PGNT N +    T   V Q P LN LGIS  R+D AP G  P H HP ASE+  VL+ ++  GF++S    N++    L  G V VFPQGL+HFQ N GKT
Sbjct:   19 VQDFCVA--NLKRAETPAGYPCIRPIHVKASDFVFS-LGTPGNTTNIISAAVTPGFVAQFPALNGLGISTARLDLAPKGVIPMHTHPGASEVLFVLDGSITAGFISS---ANSVYVQTLKPGQVMVFPQGLLHFQINAGKT 153          
BLAST of EY703294 vs. ExPASy Swiss-Prot
Match: GL37_ORYSJ (Germin-like protein 3-7 OS=Oryza sativa subsp. japonica GN=GER7 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.102e-22
Identity = 58/147 (39.46%), Postives = 83/147 (56.46%), Query Frame = 3
Query:  111 DPGHLQDVCVAINDPKDGVFVNGKF----CKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLERTLYVGFVTSDQLNNTLIAXVLNKGDVFVFPQGLIHFQFNIG 539
            DP  +QD CVA+  P+ G   +  +    CK      ++DFFF+GL   G+T N  G      NVE  P LNTLG++  R+D AP G  P H HPRA+E+  V+   + VGFV++        + V+ +G+ F  P+GL+HFQ+N G
Sbjct:   36 DPEPIQDFCVAV--PRAGGEASPAYPGFPCKPASAVVSDDFFFAGLAAAGSTDNPFGASLKPGNVEAFPALNTLGVAINRVDLAPGGVNPLHSHPRAAELVHVITGRMLVGFVST---AGKYYSKVVGEGETFAIPRGLMHFQYNPG 177          

HSP 2 Score: 21.557 bits (44), Expect = 1.102e-22
Identity = 10/22 (45.45%), Postives = 11/22 (50.00%), Query Frame = 2
Query:  566 F*QPFPGEVTIADTVFGAHPSI 631
            F    PG V  A  +FGA P I
Sbjct:  187 FNSQLPGVVPAATALFGADPEI 208          
BLAST of EY703294 vs. ExPASy Swiss-Prot
Match: GL32_ARATH (Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana GN=At3g10080 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.525e-22
Identity = 60/147 (40.82%), Postives = 80/147 (54.42%), Query Frame = 3
Query:  108 TDPGHLQDVCVA--INDP-KDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLERTLYVGFVTSDQLNNTLIAXVLNKGDVFVFPQGLIHFQFNIG 539
            +DP  +QD C+   +  P  D  F     CK+      EDF FSGL   GN     G        E  PGLNTLGIS  R D  P    PPH HPRA+E+  +++  +Y GFV S   NN + A V+ +G++ V+P+GL+HFQ N+G
Sbjct:   25 SDPDPIQDFCIPKPVTSPYHDHHFSTNLPCKNSSEVTTEDFVFSGLKTAGNFTET-GFATVPVGPENFPGLNTLGISFVRADLKPGSINPPHYHPRATEVAHLVKGRVYSGFVDS---NNKVYAKVMEEGEMMVYPKGLVHFQMNVG 167          
BLAST of EY703294 vs. ExPASy Swiss-Prot
Match: GL34_ARATH (Germin-like protein subfamily 3 member 4 OS=Arabidopsis thaliana GN=At5g61750 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.307e-22
Identity = 57/138 (41.30%), Postives = 79/138 (57.25%), Query Frame = 3
Query:  111 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLERTLYVGFVTSDQLNNTLIAXVLNKGDVFVFPQGLIHF 524
            D  ++QD C      +   F+NG  CK+P    A+DF  + L + G+T N L  + T     + PGLNTLG+S  R D    G  P H HPR+SE+  V++  ++ GFV +   NN +   VL KGDVFVFP+GL+HF
Sbjct:   19 DSDNMQDTCPTAPGEQSIFFINGYPCKNPTKITAQDFKSTKLTEAGDTDNYLQSNVTLLTALEFPGLNTLGLSVSRTDLERDGSVPFHSHPRSSEMLFVVKGVVFAGFVDT---NNKIFQTVLQKGDVFVFPKGLLHF 153          
BLAST of EY703294 vs. ExPASy Swiss-Prot
Match: GLP1_IPONI (Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.253e-21
Identity = 62/140 (44.29%), Postives = 77/140 (55.00%), Query Frame = 3
Query:  123 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLERTLYVGFVTSDQLNNTLIAXVLNKGDVFVFPQGLIHFQFNIGK 542
            + D CVA N P      +G  CK+     A DF +SGL KPGNT N +    T A V Q PG+  LG++  R+D AP G  P H HP ASEI  V+E T+   F++S    N +    L  GDV VFPQGL+ FQ   GK
Sbjct:   24 VNDFCVA-NGPGARDTPSGFVCKNTAKVTAADFVYSGLAKPGNTTNIINAAVTPAFVGQFPGVIGLGVTLARLDLAPGGVIPMHTHPGASEILNVVEGTILAAFISS---GNKVYEKALYPGDVMVFPQGLLDFQEITGK 159          
BLAST of EY703294 vs. ExPASy Swiss-Prot
Match: GL814_ORYSJ (Germin-like protein 8-14 OS=Oryza sativa subsp. japonica GN=GER5 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.762e-21
Identity = 53/112 (47.32%), Postives = 70/112 (62.50%), Query Frame = 3
Query:  210 AEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLERTLYVGFVTSDQLNNTLIAXVLNKGDVFVFPQGLIHFQFNIGKT 545
            A DF + GL   GNT+N +    T A V Q PG+N LGISA R+D A  G  P H HP ASE+  V + T+  GF+TS   +NT+    L  GD+ VFPQGL+H+Q+N G++
Sbjct:   50 AGDFAYHGLAAAGNTSNLIKAAVTPAFVGQFPGVNGLGISAARLDIAVGGVVPLHTHPAASELLFVTQGTVAAGFITSS--SNTVYTRTLYAGDIMVFPQGLLHYQYNAGQS 159          
The following BLAST results are available for this feature:
BLAST of EY703294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL38_ORYSJ2.123e-2442.00Germin-like protein 3-8 OS=Oryza sativa subsp. jap... [more]
GL33_ARATH3.523e-2444.29Germin-like protein subfamily 3 member 3 OS=Arabid... [more]
GLT3_ARATH4.601e-2445.00Germin-like protein subfamily T member 3 OS=Arabid... [more]
GLP1_SINAL4.601e-2445.00Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2... [more]
GLP1_BRANA3.895e-2346.10Germin-like protein 1 OS=Brassica napus GN=GER1 PE... [more]
GL37_ORYSJ1.102e-2239.46Germin-like protein 3-7 OS=Oryza sativa subsp. jap... [more]
GL32_ARATH2.525e-2240.82Germin-like protein subfamily 3 member 2 OS=Arabid... [more]
GL34_ARATH4.307e-2241.30Germin-like protein subfamily 3 member 4 OS=Arabid... [more]
GLP1_IPONI1.253e-2144.29Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=... [more]
GL814_ORYSJ4.762e-2147.32Germin-like protein 8-14 OS=Oryza sativa subsp. ja... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-018-A02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703294 ID=EY703294; Name=EY703294; organism=Citrus sinensis; type=EST; length=911bp
CCACGCCGTCCGGAAAAGGCACATCCTGTGACTTAATCACCATGAAGGTA
ATTCAATTTCTTATAGGTTTTGCCCTCTTGGCTTTGGCTTCTTCTTTGGC
CTCTGCCACTGACCCTGGCCATCTTCAAGATGTCTGTGTAGCCATCAATG
ACCCCAAGGATGGTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAG
CTTGCGAGAGCAGAAGATTTCTTCTTCTCAGGGCTAGGCAAGCCTGGAAA
CACAGCAAATCGACTTGGTGTTGATGAAACAGATGCAAATGTTGAGCAAA
TTCCAGGACTCAACACCCTTGGCATATCAGCATTCCGTATTGACTATGCA
CCATATGGCCAAAGGCCACCTCACATTCACCCCCGTGCCAGCGAAATCTT
CTTAGTCCTGGAAAGAACTCTNTATGTCGGTTTTGTGACATCAGACCAAC
TGAATAACACACTCATCGCANAAGTTCTAAATAAGGGAGATGTTTTTGTG
TTTCCACAAGGTTTGATTCACTTCCAATTCAACATTGGAAAAACAAATGC
AGCTGCCTATTCTGCTTCTAACAGCCATTCCCGGGTGAAGTTACCATAGC
CGACACAGTCTTTGGAGCCCATCCTTCAATCAATCCCCGATTTTCTTGCC
AAGCCATTCCCAGTTNACCCAAAGAATAGTGAAAGATCTTCAAAATTAGT
TCATTAATGGCAATTTAGGAGAAGGAATTATGACGCTTTATATAAATGGC
CTCTTCCCTAGTGGGTGTATTACTTTATTCCCAAATTTTATATCTAATTA
AATGGATAAAAGAGGTTTTCAATGAACCTTTTTCAGGCTGACTGGGGCCA
TGAAAAAAACATAATGTAATGGGTTTTATTTAAAAAAAAAAAAAAAATAA
AGGGCCGCCGT
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